mRNA_E_fasciculatus_S2_contig8340.16477.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8340.16477.1
Unique NamemRNA_E_fasciculatus_S2_contig8340.16477.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8340.16477.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS3_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 2.160e-106
Identity = 192/289 (66.44%), Postives = 219/289 (75.78%), Query Frame = 1
Query:    1 MASAISTPQHGCRARGLFTMVVVKNLLQLLVXXXXXITSSASADHTPAQDGGEPT-EEGVTYIYSCDDLVMDRTLVRGAVVFAGDIMCDSTKVIEVAQGYGDVYIVAKNPLPTTMRTKGVIFDIPEGTRVAFSAAAFILERNEGNKDAIFHVGGILGFAAEVPGYEAPDNATPEDLHRMIRAPPGGTVLAHGDSAIYYTDSAVFVIEEPRTNKXXXXXXXXXXXXEAAGGSQEHSAGLLPQEQLQREFEANGVEFVTYLNSCEDLLNERTPFEGFVAVTADIVCPEPKV 864
            M++ IS+P+ GCR  GL T  V KNLL+LLV  XXXITS+A+   TPAQDGGEPT E+  TYIYSCDDL MD TLVRG+V   GDI+CD TK+IEVAQGYGDV I A     T M TKGVIF+IP+GTRV F A AF+   NE NKD IFHV GILGF AE PG+EAPD+ATPEDLHRM+R  P GTV A GD A+Y+TDSAVFV+ EP T+K            EA GGSQ HSAGL  QEQ +RE EA+G++FVTYLNSC+DL NERTPFEG V+VTADIVCPEPKV
Sbjct:    2 MSTVISSPRRGCRPPGLVT--VAKNLLRLLVVLXXXITSAAA--DTPAQDGGEPTSEDTTTYIYSCDDLAMDTTLVRGSVAIMGDIICDKTKIIEVAQGYGDVLIFAD----TIMWTKGVIFEIPKGTRVDFGAPAFVFVSNEDNKDGIFHVDGILGFLAEDPGFEAPDDATPEDLHRMVRLAPDGTVRALGDEAMYFTDSAVFVVAEPSTDKNDNSNSNS----EATGGSQGHSAGLA-QEQQRRELEASGMDFVTYLNSCDDLPNERTPFEGVVSVTADIVCPEPKV 277          
BLAST of mRNA_E_fasciculatus_S2_contig8340.16477.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ0_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 7.130e-105
Identity = 189/288 (65.62%), Postives = 214/288 (74.31%), Query Frame = 1
Query:    1 MASAISTPQHGCRARGLFTMVVVKNLLQLLVXXXXXITSSASADHTPAQDGGEPTEEGVTYIYSCDDLVMDRTLVRGAVVFAGDIMCDSTKVIEVAQGYGDVYIVAKNPLPTTMRTKGVIFDIPEGTRVAFSAAA-FILERNEGNKDAIFHVGGILGFAAEVPGYEAPDNATPEDLHRMIRAPPGGTVLAHGDSAIYYTDSAVFVIEEPRTNKXXXXXXXXXXXXEAAGGSQEHSAGLLPQEQLQREFEANGVEFVTYLNSCEDLLNERTPFEGFVAVTADIVCPEPK 861
            M + IS+ + GCR  GL T  V KNLL+LLV     ITS+A+   TPAQDGGEPT EG TYIYSCDDL MDRTLVRG+V   GDI+C  TK+IEVAQGYGDVYIVA+    T M  KGVIF+IP+GTRV F AAA F+ E NE NKD IFHV GILGF  E PG+EAPD+ATPEDLH M+R  PG TV AHGD A+YYTDSAVFV+ EP T K            EAAGGSQ + AGL  QEQLQ+E EA+G++FVT L+SC DL NERTPFEG V+VTADIVCPEPK
Sbjct:    1 MTTVISSSRRGCRPPGLVT--VAKNLLRLLVVLVVLITSAAA--DTPAQDGGEPTAEGATYIYSCDDLAMDRTLVRGSVAIVGDIVCAETKIIEVAQGYGDVYIVAE----TIMWIKGVIFEIPKGTRVDFGAAAGFVFESNEDNKDGIFHVDGILGFLVEDPGFEAPDHATPEDLHGMVRLTPGDTVRAHGDEAMYYTDSAVFVVVEPSTYKNDNSNINS----EAAGGSQGNPAGLA-QEQLQQELEASGMDFVTCLDSCGDLPNERTPFEGVVSVTADIVCPEPK 275          
BLAST of mRNA_E_fasciculatus_S2_contig8340.16477.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ5_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 3.950e-103
Identity = 199/289 (68.86%), Postives = 224/289 (77.51%), Query Frame = 1
Query:    1 MASAISTPQHGCRARGLFTMVVVKNLLQLLVXXXXXITSSASADHTPAQDGGEPT-EEGVTYIYSCDDLVMDRTLVRGAVVFAGDIMCDSTKVIEVAQGYGDVYIVAKNPLPTTMRTKGVIFDIPEGTRVAFSAAAFILERNEGNKDAIFHVGGILGFAAEVPGYEAPDNATPEDLHRMIRAPPGGTVLAHGDSAIYYTDSAVFVIEEPRTNKXXXXXXXXXXXXEAAGGSQEHSAGLLPQEQLQREFEANGVEFVTYLNSCEDLLNERTPFEGFVAVTADIVCPEPKV 864
            M + IS+P+ GCR  GL T  V KNLL+LLV XXXX TS+A+   TPAQDGGEPT E+  TYIYSCDDL MD TLVRG+V   GDI+CD TK+IEVAQGYGDV I A     T M TKGVIF+IP+GTRV F A AF+   NE NKD IFHV GILGF AE PG+EAPD+ATPEDLH M+R  P GTV A GD A+Y+TDSAVFV+ EP T+K  XXXXXXXXX  AAGGSQ HSAGL  QEQ  RE EA+G++FVTYLNSC+DL NER PFEG V+VTADIVCPEPKV
Sbjct:    2 MTTVISSPRRGCRPPGLVT--VAKNLLRLLVVXXXXXTSAAA--DTPAQDGGEPTSEDTTTYIYSCDDLAMDTTLVRGSVAIMGDIICDKTKIIEVAQGYGDVLIFAD----TIMWTKGVIFEIPKGTRVDFGAPAFVFVSNEDNKDGIFHVDGILGFLAEDPGFEAPDDATPEDLHGMVRLAPDGTVRALGDEAMYFTDSAVFVVAEPSTDKNSXXXXXXXXX--AAGGSQGHSAGLA-QEQRPRELEASGMDFVTYLNSCDDLPNERNPFEGVVSVTADIVCPEPKV 279          
BLAST of mRNA_E_fasciculatus_S2_contig8340.16477.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ3_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 8.030e-103
Identity = 197/289 (68.17%), Postives = 222/289 (76.82%), Query Frame = 1
Query:    1 MASAISTPQHGCRARGLFTMVVVKNLLQLLVXXXXXITSSASADHTPAQDGGEPT-EEGVTYIYSCDDLVMDRTLVRGAVVFAGDIMCDSTKVIEVAQGYGDVYIVAKNPLPTTMRTKGVIFDIPEGTRVAFSAAAFILERNEGNKDAIFHVGGILGFAAEVPGYEAPDNATPEDLHRMIRAPPGGTVLAHGDSAIYYTDSAVFVIEEPRTNKXXXXXXXXXXXXEAAGGSQEHSAGLLPQEQLQREFEANGVEFVTYLNSCEDLLNERTPFEGFVAVTADIVCPEPKV 864
            M + IS+P+ GCR  GL T  V K LL+LL XXXXX    A+  +TP QDGGEPT E+  TYIYSCDDL MDRTLVRG+V   G+IMC  TK+IEV QGYGDVYIVA+    T M  KGVIF++P+GTRV F AAAF+ E NE NKD IFHV G LGF A  P YEAPD+ATPEDLHRM+R  PGGTVL H D A+YYTDSAVFVI EP T+K  XXXXXXXXXXEAAGGSQ HSAGL  +E LQRE E  G++ VT+L SC+DL NERTPFEG V+VTADIVCPEPKV
Sbjct:    2 MTTVISSPRRGCRPPGLVT--VAKTLLRLLXXXXXXXXXXAA--NTPTQDGGEPTSEDTTTYIYSCDDLTMDRTLVRGSVALMGNIMCAETKIIEVDQGYGDVYIVAE----TIMWIKGVIFEVPKGTRVDFGAAAFVFESNEDNKDGIFHVDGTLGFLAGDPDYEAPDDATPEDLHRMVRGDPGGTVLTHRDEAMYYTDSAVFVIVEPSTDKNDXXXXXXXXXXEAAGGSQGHSAGLA-EEHLQRELETRGLDLVTHLKSCDDLPNERTPFEGIVSVTADIVCPEPKV 281          
BLAST of mRNA_E_fasciculatus_S2_contig8340.16477.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D9_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 1.890e-94
Identity = 184/310 (59.35%), Postives = 211/310 (68.06%), Query Frame = 1
Query:    7 SAISTPQHGCRARGLFTMVVVKNLLQLLVXXXXXITSSASADHTPAQDGGEPTEEGVTYIYSCDDLVMDRTLVRGAVVFAGDIMCDSTK------------------------VIEVAQGYGDVYIVAKNPLPTTMRTKGVIFDIPEGTRVAFSAAAFILERNEGNKDAIFHVGGILGFAAEVPGYEAPDNATPEDLHRMIRAPPGGTVLAHGDSAIYYTDSAVFVIEEPRTNKXXXXXXXXXXXXEAAGGSQEHSAGLLPQEQLQREFEANGVEFVTYLNSCEDLLNERTPFEGFVAVTADIVCPEPKV 864
            + IS+P+ G    GL T  V K+LL+LLV     ITS+A+  H   QDG EP  E  TYIYSCDDLVMDRT+VRG+VVF GDI+C  TK                        +IEVAQGYGDV I A+    T M TKGVIF+IP+ TRV F AAAF+   NE N D IFHV GILGF A    +EAPD+ATPED HRM+R  PGGTVLA GD A+Y+TDSAVFVIEEP T+K     XX     EAAGGSQ HSAGL  QEQL+RE EA+G++ VTYL SC+DL NERTPFEG V+VTADIVCPEPKV
Sbjct:    4 TVISSPRRGRHPPGLVT--VAKHLLRLLVLLVVLITSAAADTH--GQDGEEPIGEHATYIYSCDDLVMDRTVVRGSVVFMGDIICADTKAQSQLHAVRSIHAPTMHDFAVSERIIEVAQGYGDVLIFAE----TIMWTKGVIFEIPQDTRVDFGAAAFVFVSNEDNMDGIFHVDGILGFHAVGHDFEAPDDATPEDPHRMVRGAPGGTVLALGDEAMYFTDSAVFVIEEPSTDKNDNSNXXS----EAAGGSQGHSAGLA-QEQLERELEASGLDLVTYLTSCDDLPNERTPFEGMVSVTADIVCPEPKV 300          
BLAST of mRNA_E_fasciculatus_S2_contig8340.16477.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L206_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 1.260e-88
Identity = 162/288 (56.25%), Postives = 186/288 (64.58%), Query Frame = 1
Query:    1 MASAISTPQHGCRARGLFTMVVVKNLLQLLVXXXXXITSSASADHTPAQDGGEPTEEGVTYIYSCDDLVMDRTLVRGAVVFAGDIMCDSTKVIEVAQGYGDVYIVAKNPLPTTMRTKGVIFDIPEGTRVAFSAAAFILERNEGNKDAIFHVGGILGFAAEVPGYEAPDNATPEDLHRMIRAPPGGTVLAHGDSAIYYTDSAVFVIEEPRTNKXXXXXXXXXXXXEAAGGSQEHSAGLLPQEQLQREFEANGVEFVTYLNSCEDLLNERTPFEGFVAVTADIVCPEPKV 864
            M +AIS P+ GC   GL T  V  NLL+LLV     ITS+A+   TP QDGGE T E  TYIYSCDDLVMDRT+VRG+V   G+I C  TK+IEVAQGYGDVYIVA+    T M TKGVIF+IP+GTRV F AAAF+ E NE                              EDLHRM+R  PGGTV+ H D A+YYTDSAV VI EP T+K            EAA GSQ HSA L  QE+LQRE EA+G++ VT+L SC+DL  ERTP EG V+VTADIVCPEPKV
Sbjct:    1 MTTAISYPRRGCHPPGLVT--VANNLLRLLVVLVVLITSAAA--DTPGQDGGELTAEDATYIYSCDDLVMDRTVVRGSVALMGNITCAETKIIEVAQGYGDVYIVAE----TVMWTKGVIFEIPKGTRVDFGAAAFVFESNE------------------------------EDLHRMVRGDPGGTVVTHRDEAVYYTDSAVLVIVEPSTDKNGNSNSNS----EAAVGSQRHSADLA-QEKLQRESEASGLDLVTFLKSCDDLPYERTPVEGIVSVTADIVCPEPKV 245          
BLAST of mRNA_E_fasciculatus_S2_contig8340.16477.1 vs.
Match: Integrase (catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.480e-60
Identity = 136/286 (47.55%), Postives = 167/286 (58.39%), Query Frame = 1
Query:    7 SAISTPQHGCRARGLFTMVVVKNLLQLLVXXXXXITSSASADHTPAQDGGEPT-EEGVTYIYSCDDLVMDRTLVRGAVVFAGDIMCDSTKVIEVAQGYGDVYIVAKNPLPTTMRTKGVIFDIPEGTRVAFSAAAFILERNEGNKDAIFHVGGILGFAAEVPGYEAPDNATPEDLHRMIRAPPGGTVLAHGDSAIYYTDSAVFVIEEPRTNKXXXXXXXXXXXXEAAGGSQEHSAGLLPQEQLQREFEANGVEFVTYLNSCEDLLNERTPFEGFVAVTADIVCPEPK 861
            + IS+P+ GC   GL T  V KNLL+ LV     + +SA+ D T AQD GEPT E+ +TYIYS DDL MDRT++RG+V F GDI+C  TK                                                    NKD IFHV GIL F AE   YE+PD+ATPED HR++R  PGGTV     + +Y TDSA+FV++E  ++K            EAAGGSQ HSAGL  QEQL+RE EA+G++F TYLNS ED+LNERTPFEG V+ TADIVCP+PK
Sbjct: 1587 TVISSPRRGCHPPGLVT--VAKNLLRPLVV----VITSAATD-TRAQDRGEPTAEDTITYIYSRDDLAMDRTIIRGSVAFMGDIICAETK---------------------------------------------------DNKDGIFHVDGILEFHAEDLDYESPDDATPEDPHRIVRDDPGGTVEVFNGATMYSTDSAMFVVKESISDKNDNRNSNS----EAAGGSQGHSAGLA-QEQLERELEASGLDFATYLNSWEDVLNERTPFEGVVSDTADIVCPQPK 1809          
BLAST of mRNA_E_fasciculatus_S2_contig8340.16477.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ01_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 8.360e-53
Identity = 95/143 (66.43%), Postives = 107/143 (74.83%), Query Frame = 1
Query:  436 DAIFHVGGILGFAAEVPGYEAPDNATPEDLHRMIRAPPGGTVLAHGDSAIYYTDSAVFVIEEPRTNKXXXXXXXXXXXXEAAGGSQEHSAGLLPQEQLQREFEANGVEFVTYLNSCEDLLNERTPFEGFVAVTADIVCPEPKV 864
            D IFHV GI GF AE P YEAPD+ATPE+LHRM+R  PGGTVL   D A+YYTD AVFVI EP T+K            EAAGGSQ HSAGL  QEQ+QRE EA+G++ VT+L SC+DL NERTP EG V+VTADIVCPEPKV
Sbjct:    2 DGIFHVNGISGFLAEDPDYEAPDDATPENLHRMVRGDPGGTVLTRRDEAMYYTDFAVFVIVEPSTDKNNNSNS------EAAGGSQGHSAGLA-QEQVQRELEASGLDLVTFLKSCDDLPNERTPVEGIVSVTADIVCPEPKV 137          
BLAST of mRNA_E_fasciculatus_S2_contig8340.16477.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ2_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 3.660e-44
Identity = 87/142 (61.27%), Postives = 101/142 (71.13%), Query Frame = 1
Query:    1 MASAISTPQHGCRARGLFTMVVVKNLLQLLVXXXXXITSSASADHTPAQDGGEPTEEGVTYIYSCDDLVMDRTLVRGAVVFAGDIMCDSTKVIEVAQGYGDVYIVAKNPLPTTMRTKGVIFDIPEGTRVAFSAAAFILERNE 426
            MASAIS+P+   R  GL T  V KNL++LLV     ITS+     TPAQDGG+PT E   YIYSCDDLVMDRTLVRG+V   GDI+C  TK+IEVAQGYGDV+I A+    T M  KGVIF+IP+GTRV F AA F+ E NE
Sbjct:    1 MASAISSPRRDRRPPGLVT--VAKNLVRLLVVLVVLITSA----DTPAQDGGDPTAEDAKYIYSCDDLVMDRTLVRGSVAIMGDIVCAETKIIEVAQGYGDVFIFAE----TIMWIKGVIFEIPKGTRVNFGAAGFVFESNE 132          
BLAST of mRNA_E_fasciculatus_S2_contig8340.16477.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ1_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.570e-38
Identity = 88/148 (59.46%), Postives = 101/148 (68.24%), Query Frame = 1
Query:  430 NKDAIFHVGGILGFAAEVPGYEAPDNATPEDLHRMIRAPPGGTVLAHGDSAIYYTDSAVFVIEEPRTNKXXXXXXXXXXXXEAAGGSQEHSAGLLPQEQLQREFEANGVEFVTYLNSCEDLLNERTPFEGFVAVTA---DIVCPEPKV 864
            NKD IFHV GILGF AE P +EAPD+ATPEDLH M R    G VLAHGD A+YYTDSAVFV+ EP T+K    XXXX    EAAGGSQ HSAGL  QEQLQRE EA+G++      SC +L  ERTP EG   V     D++C E ++
Sbjct:    3 NKDGIFHVDGILGFLAEYPDFEAPDDATPEDLHGMARLARDGIVLAHGDEAMYYTDSAVFVVVEPSTDKNDNSXXXX----EAAGGSQGHSAGLA-QEQLQRELEASGLDL-----SCNELRFERTPVEGMSGVLLLDDDVMCKEKRI 140          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8340.16477.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
Uncharacterized2.160e-10666.44protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized7.130e-10565.63protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.950e-10368.86protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized8.030e-10368.17protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.890e-9459.35protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.260e-8856.25protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Integrase1.480e-6047.55catalytic domain-containing protein n=1 Tax=Ectoca... [more]
Uncharacterized8.360e-5366.43protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.660e-4461.27protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.570e-3859.46protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8340contigE_fasciculatus_S2_contig8340:3102..6368 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop0
Start1
Model size864
Hectar predicted targeting categorysignal peptide
Exons4
Cds size864
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842493.6149087-CDS-E_fasciculatus_S2_contig8340:3101..33741696842493.6149087-CDS-E_fasciculatus_S2_contig8340:3101..3374Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8340 3102..3374 +
1696842493.6332867-CDS-E_fasciculatus_S2_contig8340:4532..46851696842493.6332867-CDS-E_fasciculatus_S2_contig8340:4532..4685Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8340 4533..4685 +
1696842493.6490567-CDS-E_fasciculatus_S2_contig8340:5123..52131696842493.6490567-CDS-E_fasciculatus_S2_contig8340:5123..5213Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8340 5124..5213 +
1696842493.6632702-CDS-E_fasciculatus_S2_contig8340:6020..63681696842493.6632702-CDS-E_fasciculatus_S2_contig8340:6020..6368Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8340 6021..6368 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8340.16477.1prot_E_fasciculatus_S2_contig8340.16477.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8340 3102..6368 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8340.16477.1

>prot_E_fasciculatus_S2_contig8340.16477.1 ID=prot_E_fasciculatus_S2_contig8340.16477.1|Name=mRNA_E_fasciculatus_S2_contig8340.16477.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=288bp
MASAISTPQHGCRARGLFTMVVVKNLLQLLVVIVVLITSSASADHTPAQD
GGEPTEEGVTYIYSCDDLVMDRTLVRGAVVFAGDIMCDSTKVIEVAQGYG
DVYIVAKNPLPTTMRTKGVIFDIPEGTRVAFSAAAFILERNEGNKDAIFH
VGGILGFAAEVPGYEAPDNATPEDLHRMIRAPPGGTVLAHGDSAIYYTDS
AVFVIEEPRTNKNSNSNSNSNSNSEAAGGSQEHSAGLLPQEQLQREFEAN
GVEFVTYLNSCEDLLNERTPFEGFVAVTADIVCPEPKV
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mRNA from alignment at E_fasciculatus_S2_contig8340:3102..6368+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8340.16477.1 ID=mRNA_E_fasciculatus_S2_contig8340.16477.1|Name=mRNA_E_fasciculatus_S2_contig8340.16477.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3267bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8340:3102..6368+ (Ectocarpus fasciculatus EfasUO2)
ATGGCCTCTGCCATCTCCACTCCTCAGCATGGCTGCCGCGCTCGGGGCCT CTTCACGATGGTGGTGGTGAAGAACCTGCTTCAGCTCCTGGTCGTGATCG TGGTGCTCATCACCTCATCAGCCAGCGCTGACCACACGCCTGCCCAAGAC GGGGGGGAGCCAACGGAGGAGGGCGTCACCTACATCTACAGCTGCGACGA CCTCGTGATGGACAGGACGCTCGTTCGCGGCGCCGTTGTCTTTGCGGGCG ACATCATGTGCGATAGTACCAAGGTGTGTGAGAGTCGCAGCAAAGTGTGA TGAACTTCTTCTTTGCAGATGCACGCGCCTGCCTCATCTGTCCCATGTGT AGATGTGTGCGTCTCTCTTTCTCCAGTTGTGCTCTCTGCGTTCGTTGAAA CTTGTCAAGGTGTCGGGCTTCAGCCTCTGGCACCGAACCGGCTCATATCC CCTGTACGTGCGCTCGGCGATCTTTGGCAGGCTCAAAGCCAACCTCCCGC GATGGGATCCACGGCAGAGGTCCACCATGCATGTTTTCCCCAGGATGGGG AAGAACTTTGATCGATTGCCACATGCTTCGCATCCTCTGTACCTTCTCTT CATCTTTCTGATAGATTTGGTGCAAGATAAAAACAAGCAAGCGCAATGCA TGATCCTATCTGGCGCTGCCACACCTTGGAAAATAGGGCTTGGCGCATGA ACCCATCAGTGATGAAATCGTGGCCGCACTCTGTAGACTATGCCGTTGAT TTGTTTCGTTCGTTCAAGCCGTTCTTCAGTTCTCTTCAGTTGTTTATATT CTCCCGTAAGATTGCTGCTTACTATAGACTTTTCGTTACCCTCAGATCAG AAAGTGCTACGGCTTTCTAGCGCCGTAGCAGTATATCCCGTATCTTTGTT GGGAGTAAACTTTATCGACGGACTGCATGTTACACGTGTTGCTGCTGCTG CTGCTGTATCTCGTCTGAACGAAAGCAGTTAGTTGTGTTGGATCGTCAAC TAAGGCCGTGGCAACTGTAGCGCTCAGCCCACTTGCGCGCGTCGAACCCC ACAACAAAGAAAGCCAACAAAGCCACAAGGACGAAGGTTCCAAGCACTCC GTTCTTCGCGCGCCCCTCCTGCCTCGCCTTTGCGCGACGCAACAGCAGTG CATGTTTACGGATTCGGACCAACTCAAGCTGCTGTAAACAACCGTGTACT TGTGTGGTGTCGCAGATTGGAATGAAAATACAGCAGGGAGGAGGTTTTGA TGATTGATGATCCACCGGGCTCCTCCGGGGTCTAGATTGCGCCGCAATTC AATTGCCCCGCTGCAGCGGTGCACCTGCTGCCCACGCCCACGCCATCTCT ACCCAGAGTCCTTAAAAACCAAACTCACTCGACGCTAACAAGGGTAAATG CGAATAATGACTGCTGTGCTGCCAACAACAGGTTATCGAGGTGGCTCAGG GCTACGGCGACGTCTACATCGTTGCCAAGAACCCCTTACCTACCACCATG CGGACCAAGGGGGTCATCTTCGACATCCCCGAGGGAACCAGGGTCGCCTT CAGCGCGGCGGCTTTCATCCTGGAAAGGAACGAGGTGTGTATGGCACACG TACAGCCGGCAGCCACTTGTCTATGAACCACACAGCCTTCAATTTTGCTT GCAATCGAGGCCCAGCCCATCAGAAGTTGAGACTTCCAAACACTCCAACA GCATGTGTGTATGTTGTACTGTAGGGGGGCGGAACAACAAAAAATGGTGA TCTTTGTTTTTCTCCGCGAAAAAAAACACTCCTGTCGCAGCCAGCGAGAA ACGCGGCATGCACATCACCGCACACACTGAATTGTTTTGGCTTATCTTGC ATGGCCCGTGCAACTGCCTCTATGAGAACGCGTCAATAACATAGGAGCCT TCATTGCCCAACGCAACACCCAACCTTTACCCCTTTCGCCTCGCCCCTCT CCCGCCGTTCGGCTCGTCTCTTAATTGGTCTTGTGGCATTGGGTGTTGTT GTTGGTGCCCTTGTGTACTCAGGGCAACAAGGACGCCATCTTCCACGTGG GCGGGATTCTGGGGTTTGCTGCCGAAGTCCCCGGCTACGAAGCCCCTGAC AACGCCACACCGGTAGGGCTGTCCGTTGTCGGCTGCTCTTGGTGCAGCAG TAGTGGTTGCGGCTATTAGTGGTTTACTGTGATTGATGAGTTCGTGTCTG TCGTCGCGTTTTCGTCTTGTTCTTGGTGTTCTTCGTGCCTGCCGTACAGT AGTCGTGGCCTGCGGGATGGATGTCCGTCCGCGTGGTTCGGAGCATTGCA GTCGAGACAATATTTGAGACTGCGCGAAGACGCAACAGGCTTTCGGGGTG TGAGTTGCCGGCAAGGCGATCTTAAGTTCGCGCTACCCATTAAATATCCT GGCCAAGCTTTGTTCCGCCCGGCCTTTCTATGTACGTTTGTTTTTGTTGA TTTCCTCTGCGTGCCCCCCCCCCACTCTCGCTGCGGTTTTGGGGTGAATT CCACCAATGCACAAAACTTGTTCTCCCCGCCGCACCCAATTTGGAGCAAT GATGATGCTCACCGGTGTTGGCTTCAATGACACCCTGGTCTCAATCCAAT CTTGAATACGAGCGCGCTCGAACTCGATGTTACGTCTAACCCGCAGCACC AAAACATTCTTCGTAGTTTAACAAGTCTTTGGTCTACCGTAACGTACAAC TTTTGTTACTTCCAGAGCCGGTGCTTGTAGTCCGACCATTGCATAATCTC GTTCCTGCTAGATTTATTCACAATGGTGTTGCTTCTGGAGAACACGGTTG CATGCAGGTGGAACAGGTCAGCGCCTTCCCTTCCTGATCTATGCCCCTCG CACCCCCTTGCTTGCGTCAAACGATTCCCGCTCGTCATTGCGATACACGA ACCTTTTCCCAACAAACAGGAGGACCTGCACCGGATGATCCGCGCTCCTC CCGGCGGCACCGTACTGGCTCACGGTGATTCCGCCATCTACTACACCGAC TCCGCGGTGTTCGTAATCGAAGAGCCCCGTACGAACAAGAACAGCAACAG CAACAGCAACAGCAACAGCAACAGCGAGGCGGCGGGTGGCTCTCAGGAAC ACTCTGCAGGCCTCCTCCCTCAGGAGCAGCTGCAGCGGGAGTTCGAAGCG AACGGCGTGGAGTTCGTCACGTACCTGAACTCTTGCGAAGACCTCCTGAA CGAGCGTACACCCTTCGAAGGGTTCGTGGCCGTTACGGCGGACATTGTAT GCCCTGAGCCAAAGGTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8340:3102..6368+

>mRNA_E_fasciculatus_S2_contig8340.16477.1 ID=mRNA_E_fasciculatus_S2_contig8340.16477.1|Name=mRNA_E_fasciculatus_S2_contig8340.16477.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=864bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8340:3102..6368+ (Ectocarpus fasciculatus EfasUO2)
ATGGCCTCTGCCATCTCCACTCCTCAGCATGGCTGCCGCGCTCGGGGCCT
CTTCACGATGGTGGTGGTGAAGAACCTGCTTCAGCTCCTGGTCGTGATCG
TGGTGCTCATCACCTCATCAGCCAGCGCTGACCACACGCCTGCCCAAGAC
GGGGGGGAGCCAACGGAGGAGGGCGTCACCTACATCTACAGCTGCGACGA
CCTCGTGATGGACAGGACGCTCGTTCGCGGCGCCGTTGTCTTTGCGGGCG
ACATCATGTGCGATAGTACCAAGGTTATCGAGGTGGCTCAGGGCTACGGC
GACGTCTACATCGTTGCCAAGAACCCCTTACCTACCACCATGCGGACCAA
GGGGGTCATCTTCGACATCCCCGAGGGAACCAGGGTCGCCTTCAGCGCGG
CGGCTTTCATCCTGGAAAGGAACGAGGGCAACAAGGACGCCATCTTCCAC
GTGGGCGGGATTCTGGGGTTTGCTGCCGAAGTCCCCGGCTACGAAGCCCC
TGACAACGCCACACCGGAGGACCTGCACCGGATGATCCGCGCTCCTCCCG
GCGGCACCGTACTGGCTCACGGTGATTCCGCCATCTACTACACCGACTCC
GCGGTGTTCGTAATCGAAGAGCCCCGTACGAACAAGAACAGCAACAGCAA
CAGCAACAGCAACAGCAACAGCGAGGCGGCGGGTGGCTCTCAGGAACACT
CTGCAGGCCTCCTCCCTCAGGAGCAGCTGCAGCGGGAGTTCGAAGCGAAC
GGCGTGGAGTTCGTCACGTACCTGAACTCTTGCGAAGACCTCCTGAACGA
GCGTACACCCTTCGAAGGGTTCGTGGCCGTTACGGCGGACATTGTATGCC
CTGAGCCAAAGGTG
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