mRNA_E_fasciculatus_S2_contig833.16472.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig833.16472.1 vs.
Match: Ammonium (transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL37_ECTSI) HSP 1 Score: 242 bits (617), Expect = 3.170e-75 Identity = 134/190 (70.53%), Postives = 140/190 (73.68%), Query Frame = 1
Query: 1 TVCEGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSGGESDALLNCGLVDFAGSGVVHMLGGGIGLVMSIMVENRSDRFIDANPELVEKNKSTTLERRLFKACTCCFKETKSVLRNYTSVLQLNEYHFRPSDPSWMTLGCLLLWLGWYGFNCGSTLQISSEENRNAAGRAALNTTIGA 570
T+ GAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTS GES ALLNCG VDFAGSGVVHMLGGGIGLV+SIMVENRSDRFIDA+PELVEKN S TL+RRLFK ++ P D YGFNCGSTLQISSEE RNAAGRAALNTTIGA
Sbjct: 123 TIVSGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSEGESAALLNCGFVDFAGSGVVHMLGGGIGLVLSIMVENRSDRFIDADPELVEKNTSATLDRRLFKV----------------------SHNLLPRDR--------------YGFNCGSTLQISSEETRNAAGRAALNTTIGA 276
BLAST of mRNA_E_fasciculatus_S2_contig833.16472.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF7_9PHAE) HSP 1 Score: 233 bits (593), Expect = 5.480e-71 Identity = 128/186 (68.82%), Postives = 138/186 (74.19%), Query Frame = 1
Query: 58 AFLTSAVFYPLLAHAVWADEGWASPFLTSGGESDALLNCGLVDFAGSGVVHMLGGGIGLVMSIMVENRSDRFIDANPELVEKNKSTTLERRLFKACTCCFKETKSVLRNYTSVLQLNEYHFRPSDPSWMTLGCLLLWLGWYGFNCGSTLQISSEENRNAAGRAALNTTIGAGENEHDKYEQCYQRA 615
AFLTSAVFYPLLAHA WADEGWASPFLTS GES A LNCG+VDFAGSGVVHMLGGGIGLV+S++V+NRSDRFIDANP+LVE+NKS TL+RRLFK V N LL G YGFNCGSTLQIS+EE RNAAGRAALNTTIGAGENEHDK+E CYQRA
Sbjct: 142 AFLTSAVFYPLLAHAAWADEGWASPFLTSEGESAAWLNCGVVDFAGSGVVHMLGGGIGLVLSMVVDNRSDRFIDANPQLVERNKSATLDRRLFK-----------VSHN-------------------------LLSRGRYGFNCGSTLQISTEETRNAAGRAALNTTIGAGENEHDKHELCYQRA 291
BLAST of mRNA_E_fasciculatus_S2_contig833.16472.1 vs.
Match: Ammonium_transp (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L500_9PHAE) HSP 1 Score: 199 bits (505), Expect = 3.050e-58 Identity = 108/192 (56.25%), Postives = 125/192 (65.10%), Query Frame = 1
Query: 1 TVCEGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSGGESDALLNCGLVDFAGSGVVHMLGGGIGLVMSIMVENRSDRFIDANPELVEKNKSTTLERRLFKACTCCFKETKSVLRNYTSVLQLNEYHFRPSDPSWMTLGCLLLWLGWYGFNCGSTLQISSEENRNAAGRAALNTTIGAGE 576
TV GAVADRI VKAY VYAFLTSA+FYPLLAHAVWAD+GWASP + L CG++DFAGSG+VHMLGG IGL +S V +R RF K L+N+T QLNE FR +D +WMTLG LLWLGWYGFNCGS +IS+ E++NAAGRAALNT+IGAGE
Sbjct: 101 TVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWADDGWASP-----ARENPLFGCGVIDFAGSGIVHMLGGAIGLFISKKVRSRPGRFFPP-------------------------KHWDGTLKNHTDQPQLNEAGFRSNDATWMTLGTFLLWLGWYGFNCGSVSEISTTESQNAAGRAALNTSIGAGE 262
BLAST of mRNA_E_fasciculatus_S2_contig833.16472.1 vs.
Match: Ammonium (transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G436_ECTSI) HSP 1 Score: 191 bits (485), Expect = 7.570e-54 Identity = 106/190 (55.79%), Postives = 122/190 (64.21%), Query Frame = 1
Query: 1 TVCEGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSGGESDALLNCGLVDFAGSGVVHMLGGGIGLVMSIMVENRSDRFIDANPELVEKNKSTTLERRLFKACTCCFKETKSVLRNYTSVLQLNEYHFRPSDPSWMTLGCLLLWLGWYGFNCGSTLQISSEENRNAAGRAALNTTIGA 570
TV GAVADRI VKAY VYAFLTSA+FYPLLAHAVW D+GWASP L CG++DFAGSG+VHM GG IGL +S V +R RF A N S L+N+T QLNE FR +DP+WMTLG LLWLGWYGFNCGS +IS+ ++NAAGRAALNT+IGA
Sbjct: 125 TVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASP-----AREYPLFGCGVIDFAGSGIVHMFGGAIGLFVSRKVRSRGGRFFPAKHWDGGANGSK--------------------LKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA 289
BLAST of mRNA_E_fasciculatus_S2_contig833.16472.1 vs.
Match: Ammonium (transporter n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G8J5_9EUGL) HSP 1 Score: 109 bits (272), Expect = 3.160e-24 Identity = 72/191 (37.70%), Postives = 96/191 (50.26%), Query Frame = 1
Query: 1 TVCEGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSGGESDALLNCGLVDFAGSGVVHMLGGGIGLVMSIMVENRSDRFIDANPELVEKNKSTTLERRLFKACTCCFKETKSVLRNYTSVLQLNEYHFRPSDPSWMTLGCLLLWLGWYGFNCGSTLQISSEENRNAAGRAALNTTIGAG 573
T+ GAVA+RI V +Y +++FL S V YP++ H +W+ GW S F S L G++DFAGSGVVH+ GG LV + ++ R R+ L EK + E FRP + + LG L+LW GWYGFNCGSTL SS + AA R A+ TT+ AG
Sbjct: 135 TIVSGAVAERITVLSYTIFSFLMSTVIYPVVVHWIWSVHGWLSAFNAS--PVGRLGTNGMLDFAGSGVVHLTGGMASLVGAAILGPRKGRYGPKGEHLDEK--------------------------------KAREEIFRPHNRALCCLGTLVLWFGWYGFNCGSTLAASSGASYIAA-RVAVTTTLSAG 290
BLAST of mRNA_E_fasciculatus_S2_contig833.16472.1 vs.
Match: Ammonium (transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE) HSP 1 Score: 108 bits (271), Expect = 5.910e-24 Identity = 67/189 (35.45%), Postives = 92/189 (48.68%), Query Frame = 1
Query: 1 TVCEGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSGGESDALLNCGLVDFAGSGVVHMLGGGIGLVMSIMVENRSDRFIDANPELVEKNKSTTLERRLFKACTCCFKETKSVLRNYTSVLQLNEYHFRPSDPSWMTLGCLLLWLGWYGFNCGSTLQISSEENRNAAGRAALNTTIG 567
T+ GA+A+R+ + +Y YA ++ YP++ H W +GWASP+ T+ + L CG DFAGSGVVHM+GG LV +I V+ R RF + AC P+ TLG L+LW+GWY FN GST+ IS + AA RA ++TTIG
Sbjct: 140 TIVSGAIAERVKIVSYVTYAIALTSFIYPVVVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVGGIAALVAAIAVKPRKSRFRHGH------------------AC-----------------------RLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAA-RAVVSTTIG 286
BLAST of mRNA_E_fasciculatus_S2_contig833.16472.1 vs.
Match: Ammonium (transporter n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4G932_9CHLO) HSP 1 Score: 105 bits (262), Expect = 6.190e-23 Identity = 71/188 (37.77%), Postives = 93/188 (49.47%), Query Frame = 1
Query: 1 TVCEGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSGGESDALLNCGLVDFAGSGVVHMLGGGIGLVMSIMVENRSDRFIDANPELVEKNKSTTLERRLFKACTCCFKETKSVLRNYTSVLQLNEYHFRPSDPSWMTLGCLLLWLGWYGFNCGSTLQISSEENRNAAGRAALNTTI 564
T+ GAVA+R+ AY +Y+F SA YP++ H VW EGW + E L G++DFAGSGVVHM GG GL +MV R RF D+N VE + +++ L + LG +LLW GWYGFN GS L ISS +N + GRAA+ TT+
Sbjct: 155 TIPAGAVAERLNFNAYLIYSFFISAFVYPVVVHWVWGWEGWLG--MLRNPELTHLFRSGMIDFAGSGVVHMTGGLAGLAGCLMVGPRMGRF-DSNGNPVE-------------------------MPGHSATL--------------VVLGTVLLWFGWYGFNPGSQLLISSLDNASVVGRAAVTTTL 300
BLAST of mRNA_E_fasciculatus_S2_contig833.16472.1 vs.
Match: Ammonium (transporter n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BV22_9CHLO) HSP 1 Score: 105 bits (261), Expect = 8.860e-23 Identity = 74/191 (38.74%), Postives = 95/191 (49.74%), Query Frame = 1
Query: 1 TVCEGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSGGESDALLNCGLVDFAGSGVVHMLGGGIGLVMSIMVENRSDRFIDANPELVEKNKSTTLERRLFKACTCCFKETKSVLRNYTSVLQLNEYHFRPSDPSWMTLGCLLLWLGWYGFNCGSTLQISSEENRNAAGRAALNTTIGAG 573
T+ GAVA+R+ AY +Y+F SA YP++AH VWA EGW F G S L G++DFAGSGVVHM GG GL IMV R RF D+N VE + +++ L + LG +LLW GWYGFN GS L I+S + GR+A+ TT+ G
Sbjct: 161 TIPAGAVAERLNFNAYLIYSFFISAFVYPVVAHWVWAAEGWLG-FARYAGYSH-LFRSGMIDFAGSGVVHMTGGLAGLAGCIMVGPRMGRF-DSNGNPVE-------------------------MPGHSATL--------------VVLGTVLLWFGWYGFNPGSQLIITSIKASAVVGRSAVTTTLAGG 309
BLAST of mRNA_E_fasciculatus_S2_contig833.16472.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CV80_9EUKA) HSP 1 Score: 101 bits (252), Expect = 1.550e-21 Identity = 69/190 (36.32%), Postives = 97/190 (51.05%), Query Frame = 1
Query: 1 TVCEGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSGGESDALLNCGLVDFAGSGVVHMLGGGIGLVMSIMVENRSDRFIDANPELVEKNKSTTLERRLFKACTCCFKETKSVLRNYTSVLQLNEYHFRPSDPSWMTLGCLLLWLGWYGFNCGSTLQISSEENRNAAGRAALNTTIGA 570
T+ GAVA+R +AY Y F S YP++ H VW+ EG+ S F + G++DFAGSGVVHM GG + LV +I+V R RF+ + + ++ L+ R + ++E K V L+ S+ S LG +LWLGWYGFN GSTL + A R A+ TT+ A
Sbjct: 146 TIVSGAVAERTQFRAYLAYTFFISGFIYPVVVHWVWSGEGFLSQF----NPDSTKVGPGMIDFAGSGVVHMTGGMLALVGAIVVGPRHGRFVHVGQDKSQATFTSYLDFR-----SSFWRERKG---GKWEVRDLSA-----SNSSAAVLGTFILWLGWYGFNPGSTLSFAGGAQL-VAERTAMTTTLAA 317
BLAST of mRNA_E_fasciculatus_S2_contig833.16472.1 vs.
Match: Ammonium (transporter n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CV10_9EUKA) HSP 1 Score: 101 bits (252), Expect = 1.720e-21 Identity = 69/190 (36.32%), Postives = 97/190 (51.05%), Query Frame = 1
Query: 1 TVCEGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSGGESDALLNCGLVDFAGSGVVHMLGGGIGLVMSIMVENRSDRFIDANPELVEKNKSTTLERRLFKACTCCFKETKSVLRNYTSVLQLNEYHFRPSDPSWMTLGCLLLWLGWYGFNCGSTLQISSEENRNAAGRAALNTTIGA 570
T+ GAVA+R +AY Y F S YP++ H VW+ EG+ S F + G++DFAGSGVVHM GG + LV +I+V R RF+ + + ++ L+ R + ++E K V L+ S+ S LG +LWLGWYGFN GSTL + A R A+ TT+ A
Sbjct: 146 TIVSGAVAERTQFRAYLAYTFFISGFIYPVVVHWVWSGEGFLSQF----NPDSTKVGPGMIDFAGSGVVHMTGGMLALVGAIVVGPRHGRFVHVGQDKSQATFTSYLDFR-----SSFWRERKG---GKWEVRDLSA-----SNSSAAVLGTFILWLGWYGFNPGSTLSFAGGAQL-VAERTAMTTTLAA 317 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig833.16472.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig833.16472.1 >prot_E_fasciculatus_S2_contig833.16472.1 ID=prot_E_fasciculatus_S2_contig833.16472.1|Name=mRNA_E_fasciculatus_S2_contig833.16472.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=206bp TVCEGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSGGback to top mRNA from alignment at E_fasciculatus_S2_contig833:24240..26422- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig833.16472.1 ID=mRNA_E_fasciculatus_S2_contig833.16472.1|Name=mRNA_E_fasciculatus_S2_contig833.16472.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2183bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig833:24240..26422- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig833:24240..26422- >mRNA_E_fasciculatus_S2_contig833.16472.1 ID=mRNA_E_fasciculatus_S2_contig833.16472.1|Name=mRNA_E_fasciculatus_S2_contig833.16472.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=618bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig833:24240..26422- (Ectocarpus fasciculatus EfasUO2)back to top |