mRNA_E_fasciculatus_S2_contig8327.16468.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8327.16468.1
Unique NamemRNA_E_fasciculatus_S2_contig8327.16468.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8327.16468.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G473_ECTSI)

HSP 1 Score: 491 bits (1264), Expect = 9.540e-169
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1 
Query:  151 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 888
            AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD
Sbjct:    5 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 250
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8327.16468.1 vs.
Match: Fibrillarin (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z838_9STRA)

HSP 1 Score: 433 bits (1113), Expect = 5.660e-146
Identity = 212/243 (87.24%), Postives = 229/243 (94.24%), Query Frame = 1 
Query:  151 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSK 879
            AKVVVEPHRHEGVFIAR KEDALCTLNS+PGKAVYGEKLISV+ PP+ DG T+KIEYRVWNPFRSK+AAAILGG + I + PG+KVLYLGAAAGT+VSHV+DIVGP+GCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNSHYFLKNGGHCVIS+KASCVDSTA+PEAVFAQEVSKL++E FKP EQ+TLEPYERDHAVV+A YR  KKSK
Sbjct:    5 AKVVVEPHRHEGVFIARSKEDALCTLNSTPGKAVYGEKLISVDGPPTADGATTKIEYRVWNPFRSKIAAAILGGTENIWMAPGSKVLYLGAAAGTSVSHVSDIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDCVFADVAQPDQARIVALNSHYFLKNGGHCVISVKASCVDSTAAPEAVFAQEVSKLRSEGFKPLEQLTLEPYERDHAVVVAEYRAAKKSK 247
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8327.16468.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWV2_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 1.100e-139
Identity = 204/245 (83.27%), Postives = 221/245 (90.20%), Query Frame = 1 
Query:  154 KVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 888
            KVV+EPHRHEGVFIAR KEDAL TLNS+PGK VYGEK I V+ PP  DG T+KIEYRVWNPFRSKLAAA+LGGVD I + PGAKVLYLGAAAGTTVSHV+DIVGP G VYAVEFAHRPGRDLINMAK+RTNVIPIIEDARHPLKYRMLV MVDT+FADVAQPDQARIVALN+HYFLKNGGH VISIKASC+DSTA PEAVFA+EV KL+TE FKP EQ+TLEPYERDHAVV+  YRPPKK+K  +
Sbjct:   28 KVVIEPHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVDGPPGPDGNTTKIEYRVWNPFRSKLAAAVLGGVDNIWMAPGAKVLYLGAAAGTTVSHVSDIVGPQGAVYAVEFAHRPGRDLINMAKARTNVIPIIEDARHPLKYRMLVPMVDTIFADVAQPDQARIVALNAHYFLKNGGHFVISIKASCIDSTAPPEAVFAREVKKLQTEQFKPAEQLTLEPYERDHAVVVGAYRPPKKAKKSE 272
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8327.16468.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GIT5_HETAK)

HSP 1 Score: 416 bits (1069), Expect = 2.640e-139
Identity = 202/244 (82.79%), Postives = 223/244 (91.39%), Query Frame = 1 
Query:  151 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKS 882
            AKV++EPHRHEGVFIARGKEDAL TLNS+PGK VYGEK + V+ PP  DG T+K+EYRVWNPFRSKLAAAILGGVD I + PG+KV+YLGAAAGTTVSHV+DIVGP+G VYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNSHYFLKNGGH V+SIKASC+DSTAS EAVFA+EV KL+ E F+P+EQ+TLEPYERDHAVV+A YR PKK K+
Sbjct:    5 AKVIIEPHRHEGVFIARGKEDALVTLNSTPGKDVYGEKRVQVDGPPGPDGNTTKLEYRVWNPFRSKLAAAILGGVDNIWMKPGSKVMYLGAAAGTTVSHVSDIVGPTGAVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDCVFADVAQPDQARIVALNSHYFLKNGGHAVVSIKASCIDSTASAEAVFAREVKKLQDEQFRPQEQLTLEPYERDHAVVVATYRQPKKKKA 248
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8327.16468.1 vs.
Match: Uncharacterized (protein n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8CBC2_THAPS)

HSP 1 Score: 414 bits (1065), Expect = 7.500e-138
Identity = 202/244 (82.79%), Postives = 224/244 (91.80%), Query Frame = 1 
Query:  151 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKS 882
            +KVV+EPHRHEGVFIARGKEDAL TLNS+PG AVYGEK ISVE PP  DG T+K+EYRVWNPFRSK+AAAILGGVD I I PG+KVLYLGAAAGT+VSHV+DIVGP G VYAVEF+HRPGRDL+N+AK+RTNVIPIIEDARHPLKYRMLVGMVD VFAD+AQPDQARIVALNSHYFLKNGGH VI+IKASC+DSTA+PEAVF +EVSKL++ENFKP EQ+TLEPYERDH V+IA YRP KK KS
Sbjct:   59 SKVVIEPHRHEGVFIARGKEDALVTLNSTPGVAVYGEKRISVETPPGPDGNTTKVEYRVWNPFRSKIAAAILGGVDNIWIKPGSKVLYLGAAAGTSVSHVSDIVGPKGAVYAVEFSHRPGRDLLNVAKARTNVIPIIEDARHPLKYRMLVGMVDCVFADIAQPDQARIVALNSHYFLKNGGHSVIAIKASCIDSTAAPEAVFRREVSKLQSENFKPLEQLTLEPYERDHCVLIAQYRPSKKKKS 302
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8327.16468.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0A1_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 4.370e-137
Identity = 202/241 (83.82%), Postives = 220/241 (91.29%), Query Frame = 1 
Query:  151 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKK 873
            AKVVVEPHRHEGVFIARGKED + TLNS+PGK VYGEK ISV+ P +EDGTT+KIEYRVWNPFRSKL AAILGGVD IH+ PG+KVLYLG AAGTTVSHV+D+VGP GCVYAVEF+HRPGRDLINMAK RTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNS YFLK GG  V+SIKASC+DSTA+PEAVFA EV+KL+ + FKPKEQ+TLEPYERDHAVV+ LYRPPKK
Sbjct:   55 AKVVVEPHRHEGVFIARGKEDVIVTLNSTPGKDVYGEKRISVDGPANEDGTTTKIEYRVWNPFRSKLCAAILGGVDTIHMKPGSKVLYLGGAAGTTVSHVSDLVGPQGCVYAVEFSHRPGRDLINMAKHRTNVIPIIEDARHPLKYRMLVGMVDCVFADVAQPDQARIVALNSQYFLKAGGGFVVSIKASCIDSTATPEAVFAAEVAKLQKDQFKPKEQLTLEPYERDHAVVVGLYRPPKK 295
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8327.16468.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDH6_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 5.120e-137
Identity = 201/243 (82.72%), Postives = 222/243 (91.36%), Query Frame = 1 
Query:  151 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSK 879
            AKV+VEPHRHEG+F+ARGKEDAL TLNS+PG AVYGEK ISV+ PP  DG  +K+EYRVWNPFRSKLAAA+LGGVD I I PG KVLYLGAAAGT+VSHV+DIVGP+G VYAVEF+HRPGRDLINMAKSRTNVIPIIEDARHPLKYRML+GMVDTVFADVAQPDQARIVALNS YFLKN GHCVIS+KASC+DSTA+PEAVF +EVSKL+ ENF+P EQ+TLEPYERDHAVVIA +RP KK K
Sbjct:   82 AKVIVEPHRHEGIFVARGKEDALVTLNSTPGAAVYGEKRISVDGPPGADGNATKVEYRVWNPFRSKLAAAVLGGVDNIWIKPGYKVLYLGAAAGTSVSHVSDIVGPTGSVYAVEFSHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLIGMVDTVFADVAQPDQARIVALNSSYFLKNKGHCVISVKASCIDSTAAPEAVFRREVSKLQAENFRPLEQLTLEPYERDHAVVIAQFRPDKKKK 324
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8327.16468.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KUE1_9STRA)

HSP 1 Score: 412 bits (1060), Expect = 9.550e-137
Identity = 203/246 (82.52%), Postives = 223/246 (90.65%), Query Frame = 1 
Query:  151 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 888
            AKVV+EPHRHEGVFIARGKEDAL TLNS+PG AVYGEK ISVE+PP  DG + K+EYRVWNPFRSK+AAAILGGVD I I PG+KVLYLGAAAGT+VSHV+DIVGP G VYAVEF+HRPGRDL+N+AK RTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNSHYFLKNGGH VISIKASC+DSTA+PEAVF +EVSKL +ENFKP EQ+TLEPYERDH V+I+ YRP KK KS +
Sbjct:   82 AKVVIEPHRHEGVFIARGKEDALVTLNSTPGVAVYGEKRISVESPPGPDGNSVKVEYRVWNPFRSKIAAAILGGVDNIWIKPGSKVLYLGAAAGTSVSHVSDIVGPKGNVYAVEFSHRPGRDLLNVAKGRTNVIPIIEDARHPLKYRMLVGMVDVVFADVAQPDQARIVALNSHYFLKNGGHSVISIKASCIDSTAAPEAVFRREVSKLTSENFKPLEQLTLEPYERDHCVLISQYRPTKKKKSSE 327
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8327.16468.1 vs.
Match: Hypothetical (protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4V9_9STRA)

HSP 1 Score: 409 bits (1050), Expect = 2.750e-135
Identity = 199/244 (81.56%), Postives = 223/244 (91.39%), Query Frame = 1 
Query:  151 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKS 882
            AKV+VEPHRH+G+F+ARGKEDAL TLNS+PG AVYGEK ISV+ P   DG  +K+EYRVWNPFRSK+AAA+LGGVD I I PG+KVLY+GAAAGT+VSHV+DIVGP+G VYAVEF+HRPGRDLIN+AKSRTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNSHYFLKNGGH VI+IKASC+DSTA+PEAVF +EVSKL +ENFKP EQ+TLEPYERDHAVVIA YRP KK K+
Sbjct:   79 AKVIVEPHRHKGIFVARGKEDALVTLNSTPGVAVYGEKRISVDGPVGSDGNVTKVEYRVWNPFRSKIAAAVLGGVDNIWIEPGSKVLYIGAAAGTSVSHVSDIVGPTGSVYAVEFSHRPGRDLINVAKSRTNVIPIIEDARHPLKYRMLVGMVDVVFADVAQPDQARIVALNSHYFLKNGGHSVIAIKASCIDSTAAPEAVFRREVSKLTSENFKPLEQLTLEPYERDHAVVIAEYRPNKKKKA 322
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8327.16468.1 vs.
Match: rRNA (2'-O-methyltransferase fibrillarin (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CQX8_NANGC)

HSP 1 Score: 405 bits (1042), Expect = 3.440e-135
Identity = 197/243 (81.07%), Postives = 219/243 (90.12%), Query Frame = 1 
Query:  151 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSK 879
            AKV++E HRHEGVFIAR KEDAL TLNS+PGK VYGEK I VE PP  +G  +K+EYRVWNPFRSKLAAAILGGVD I + PG+KVLYLGAA+GTTVSHV+DIVGP+GCVYAVEF+HRPGRDLINMAK RTNVIPI+EDARHPLKYRMLVGMVDT+FADVAQPDQARIV+LNSHYFLKNGGH VISIKASC+DSTA+PEAVF +EV KL+ E FKP EQ+TLEPYERDHAVV+A YRP  K+K
Sbjct:    9 AKVIIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMKPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVISIKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKTK 251
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8327.16468.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized9.540e-169100.00protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G473... [more]
Fibrillarin5.660e-14687.24n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z... [more]
Hypothetical1.100e-13983.27protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical2.640e-13982.79protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized7.500e-13882.79protein n=2 Tax=Thalassiosirales TaxID=33847 RepID... [more]
Hypothetical4.370e-13783.82protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical5.120e-13782.72protein n=1 Tax=Proboscia inermis TaxID=420281 Rep... [more]
Hypothetical9.550e-13782.52protein n=1 Tax=Skeletonema marinoi TaxID=267567 R... [more]
Hypothetical2.750e-13581.56protein n=3 Tax=Ditylum brightwellii TaxID=49249 R... [more]
rRNA3.440e-13581.072'-O-methyltransferase fibrillarin (Fragment) n=3 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8327contigE_fasciculatus_S2_contig8327:294..4165 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score500.4
Seed ortholog evalue5e-139
Seed eggNOG ortholog2880.D7G473
Model size2006
KEGG koko:K14563
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0000494,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005732,GO:0006139,GO:0006325,GO:0006364,GO:0006396,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008213,GO:0008276,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0015030,GO:0016043,GO:0016070,GO:0016072,GO:0016074,GO:0016569,GO:0016570,GO:0016571,GO:0016604,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0022613,GO:0030684,GO:0031123,GO:0031126,GO:0031167,GO:0031428,GO:0031974,GO:0031981,GO:0032040,GO:0032259,GO:0032991,GO:0033967,GO:0034470,GO:0034641,GO:0034660,GO:0034963,GO:0036009,GO:0036211,GO:0042054,GO:0042254,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0046483,GO:0051276,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140096,GO:0140098,GO:0140102,GO:1901360,GO:1901363,GO:1901564,GO:1990258,GO:1990259,GO:1990904
Exons5
EggNOG free text desc.ubiE/COQ5 methyltransferase family
EggNOG OGsCOG1889@1,KOG1596@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-02_001530.1
Cds size753
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8327.16468.1prot_E_fasciculatus_S2_contig8327.16468.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8327 1409..4027 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842492.5433748-UTR-E_fasciculatus_S2_contig8327:293..14081696842492.5433748-UTR-E_fasciculatus_S2_contig8327:293..1408Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8327 294..1408 -
1696842492.6004384-UTR-E_fasciculatus_S2_contig8327:4027..41651696842492.6004384-UTR-E_fasciculatus_S2_contig8327:4027..4165Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8327 4028..4165 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842492.5550466-CDS-E_fasciculatus_S2_contig8327:1408..15341696842492.5550466-CDS-E_fasciculatus_S2_contig8327:1408..1534Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8327 1409..1534 -
1696842492.564266-CDS-E_fasciculatus_S2_contig8327:1805..19251696842492.564266-CDS-E_fasciculatus_S2_contig8327:1805..1925Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8327 1806..1925 -
1696842492.5734305-CDS-E_fasciculatus_S2_contig8327:2629..28691696842492.5734305-CDS-E_fasciculatus_S2_contig8327:2629..2869Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8327 2630..2869 -
1696842492.5825608-CDS-E_fasciculatus_S2_contig8327:3056..32151696842492.5825608-CDS-E_fasciculatus_S2_contig8327:3056..3215Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8327 3057..3215 -
1696842492.5916674-CDS-E_fasciculatus_S2_contig8327:3919..40271696842492.5916674-CDS-E_fasciculatus_S2_contig8327:3919..4027Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8327 3920..4027 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8327.16468.1

>prot_E_fasciculatus_S2_contig8327.16468.1 ID=prot_E_fasciculatus_S2_contig8327.16468.1|Name=mRNA_E_fasciculatus_S2_contig8327.16468.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=251bp
MKGGAKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPP
SEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTT
VSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKY
RMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTA
SPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD
*
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mRNA from alignment at E_fasciculatus_S2_contig8327:294..4165-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8327.16468.1 ID=mRNA_E_fasciculatus_S2_contig8327.16468.1|Name=mRNA_E_fasciculatus_S2_contig8327.16468.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3872bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8327:294..4165- (Ectocarpus fasciculatus EfasUO2)
GGTGGTTTTGGCGGGCGTGATGGTGGGCGCGGTGGACGGGGTGGGGGGAG
GGGAGGAGGGCGAGGAGGTGGTCGAGGGGGTGGTAGGGGAGGCAGAGGTG
GACGTGGTGGAGGGCGAGGAGGTGGCCGTGGCGGAGGCATGAAGGGCGGC
GCCAAGGTGGTTGTGGAGCCTCACAGGCACGAGGGGGTGTTCATCGCTAG
AGGAAAGGAGGATGCGCTGTGTACGCTCAACAGTTCCCCCGGCAAGGTGG
GCTTAGAGATGGGTATTCTATTTGAGCCGCGCCCAGCATGCACCGGATGG
GACATCGAAGCTCATGTTAATGTACAGATTTGGAGGTTTTCCCAGAGGCT
GTTTGCTGGGCGCCCCCGGTATGAAGGTTTCGGCGCTTCTCGCATCCTCC
ACATCATGTTTTTTCGCGGTTTACGTTGCCTTCAATTGTGAACGACTGGG
CAGCTTTATGCCGACGGAACATGGAACTACCAAGCGCTCGTGCAGAGGGT
GCTTGTGAACGCGCGTGCGCCCTGTACGCATTCTAAAGCATGTTTCAGTT
AGTTTTGTCCTCTTGGTTTCCGTGTTGGTCATGGAAGCGACTCAGTTGAA
GATCAGCATTGATGAAATTTCATATGCTCAGCGGGGGTCCTCTACTGGAC
TTGACGCGCGATGGTGCGCATTTATGACATGCTGATGACATGCTGTCGAC
GTTGTGCCGAGAGTAGCCTTGTCAGCCGTATTTGGCAGGCTAGCTAGCGG
GTCTAGCCCGTCATCCATTACATGTATATGTAGGTGTACCTGTTTTGATC
AGTTTTGCCGTCGTGTGGTGTTGCTTAATGCGGCTCCGGGTTCTCTGTTG
GACTACTAGTATTATTTGAATTCGCTGGGTCAAAACCTCGCAAAGATGCA
TGCTTCAACAACCCCTCCTCATCCTTCACCCTGATCTGACCCACGCCCAG
GCAGTGTACGGCGAGAAGCTAATATCGGTGGAGGCACCACCGAGCGAAGA
CGGCACAACATCGAAGATTGAATACCGGGTGTGGAATCCGTTCAGGTCCA
AGCTTGCCGCGGCTATCCTCGGAGGAGTAGACGGCATCCACATCGTCCCG
GGGGCAAAAGTACGTATCACCATGTCATTCGATTAGGTGTGGCAGGGTCA
CTCAAGTTTCGGCGCTTCGTGCGGGAATACTCTTGTCGCGCCTGCGTACT
ACCTCACTTGCTCGTTGTACTTGCTTAAACCTCGCTTACTCTGGGTGGGA
TGGACGAAGCTAACACTGCCCTGCTTGAAAAAACCATGTGCCACAGGTTC
TGTATCTTGGTGCAGCTGCCGGGACCACTGTCTCGCACGTTGCCGACATC
GTGGGGCCATCCGGGTGCGTCTACGCCGTGGAGTTTGCTCACCGTCCCGG
TCGAGACCTCATCAACATGGCAAAGTCGCGCACGAACGTCATCCCCATCA
TCGAGGACGCGCGACACCCGCTGAAGTATCGTATGCTCGTGGGCATGGTC
GACACTGTTTTCGCGGATGTTGCCCAGCCGGATCAGGTGAGAGGTTTTTT
TTTTCCAAACCGCGTTGCTAGATTCGGAATATTTACTGACTTTACATTTT
CTCACGAAAAACAGATCGCGGTTCCCGGCATGTTTCTAATTAAAGCAGGT
TGCATAAGGTACCAACCCCCGATTACGCTGCAGCACAGTGACGGTGCCGA
AATTGGTGTCGTTGATAACGAGACTTTCCCGATAACATACGCATATAATT
TGATTGTGGCATCCTCTTGTTCATGTTGTCGAGTTTGACATCAGTCTAGG
GGGTGGAATATCATATGCAACCTACGGTAGGCACTCCCGCGTCGCTGTTT
GTTTGATTGCAACGTTTGTTTGATTGCAACAACCAATCCGGGTTAAAGAG
CAAGTATGCAAGGTAGCAGTCCGCCAGCGTCATCAGGTAGGTTTTTACTG
GTTTCTTGTCGTCGACGTTCGGACATAACTGGTCGATCGGAACCGCGGCA
GCCTCAGACGAAGCCAGGCGCCCACTCGAGTTGCCGGATAGAAGTGGCCC
ACCAGCTCGTCTTCCGCGAGGGCGAGGTTTTAAGCCGGGCTAATGAATCA
CCTGCCAGGCCGACTATTTTACTAGTCAGACCGCCTTTGTTGATTTCTTC
CTGGACCAGAGGTTTCATGGCTGGAACGGATGTTGGTCATGACTACGTGC
CCATCATGTTTGCACTGGTGTTTATGTCGGATCCGCGCAGGCGCGTATCG
TGGCGCTGAACTCGCACTACTTCCTCAAGAACGGAGGGCACTGCGTCATT
TCCATCAAGGCATCGTGCGTCGACTCCACCGCGTCACCGGAGGCCGTGTT
TGCTCAGGAGGTATGTTTTTGTATGTGGTGGTTTTGGGACAGGACTATCA
CTACGATGTTGGCTGTTTTGTTCGTCCATGTCACTGCCCGTCCGTCCTTG
GTTGCCACGTCCGTGGATTTTGAAGTACCGTTGGCCAACCTTTTAGTCCC
CCCCGCCCACGGCTTCGAGAGCACATGCACGCTTTGCCCCAGTCAAACAT
TGGTAGCAACTTGGCAGTGTGTTGATAGTCTTGTTTGTTTGAAGTCGTGG
TCGTCGTCGTCTTCTTTTGTCTTCGTTGCAGGTTTCCAAGCTCAAGACGG
AAAACTTCAAGCCAAAGGAGCAGGTTACCCTGGAGCCCTACGAGCGTGAC
CACGCCGTAGTTATTGCGCTCTACCGCCCGCCCAAGAAATCGAAATCGAA
GGACTGAATTGGGCAGTTCACGGGAATGTGGAATTGAACTTTCGCGGCCA
CATGTTCCCTGGAAAAGTCGTTTCAGATTAGCTGTTCGATAGTAATTTTT
TTTGCCACGGAATCATGAGTTTTTTTTTGCCACGAAATAATGCATGCGGG
GTGGCTGCTTGCTGCCTTTCACCCGTGGCCAATCTTTTCGTGGATTGCTT
TGTTGGTTCGATTGGTGGAACAGCTCAAAGTGGACACAGCTATAATAATA
TAATCCCTTATTCAAGCGAAGCGAGATTTCTAATCTCGCCTGAGGTCTCA
CTCAAGGTAGAAACAAATAAAGTGTGCGTGCGTGTGTCTGTTCGCTCAAA
CTCGGTTTTATAGTAGAGCAGTACATGACTTGATTTTAGACTCCTTCCTT
TTTTTGCACTACTTGAGGAGCACACAGCGGATTTTGCACTACACTGCTGC
TCTGCATCAGTGCTGCTCTGCAGCAGAGAACACACACATACGCACTGCGG
GCGACACCACACAGCAGACAGGGTACGCATAACGGGCGGCACACACGCAC
AGTGGGCGACAGGATCTGGGGGCTCGATGCCGCTGGACTGGTAATTCTGT
CGCGCACGGATTTTTGGTTGACCGCCAGTCCAGCGCAACATGAGTTCTCG
CAACCCAGGAGGCCGATCGCCATCGCACCACTTGGAGCGTGTGCTCCATC
ATGGTGTCTCTGGGCGTGACAGTTGTATTGGATATGGGTGCTTTATGTGG
AGAGAGCATCATGCCGATGTGAAATGAGGAAGGTGTGTGTTGCTCTTTCG
CCCGGTGACGATACCGACTGCTGCTACCACATACTGCTTTGCCCGGCGGG
CAAAAAATTGATCGGACTTGGTCCACGCCGCCACGAAGCACACTTCCCAC
ACACAGCACCCTGTTATGGTATCTGGTAGACTTGTGAACATGCTACACCA
TGGTTATTTGGCGCCGTCAGATGATAGGACGTGACGTCATGCAAGATTCG
GGCTTAATGCCGAAGCTTGTGCCCCCTTCTGTTCAGTGTGTGATCCGCCT
GGGATGGTATGCGTTTGGAATCTGTGAGTTGGGTTGGAAAACAATAATCA
AAAGGAGGGAGACCAACGGAGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8327:294..4165-

>mRNA_E_fasciculatus_S2_contig8327.16468.1 ID=mRNA_E_fasciculatus_S2_contig8327.16468.1|Name=mRNA_E_fasciculatus_S2_contig8327.16468.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=753bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8327:294..4165- (Ectocarpus fasciculatus EfasUO2)
ATGAAGGGCGGCGCCAAGGTGGTTGTGGAGCCTCACAGGCACGAGGGGGT
GTTCATCGCTAGAGGAAAGGAGGATGCGCTGTGTACGCTCAACAGTTCCC
CCGGCAAGGCAGTGTACGGCGAGAAGCTAATATCGGTGGAGGCACCACCG
AGCGAAGACGGCACAACATCGAAGATTGAATACCGGGTGTGGAATCCGTT
CAGGTCCAAGCTTGCCGCGGCTATCCTCGGAGGAGTAGACGGCATCCACA
TCGTCCCGGGGGCAAAAGTTCTGTATCTTGGTGCAGCTGCCGGGACCACT
GTCTCGCACGTTGCCGACATCGTGGGGCCATCCGGGTGCGTCTACGCCGT
GGAGTTTGCTCACCGTCCCGGTCGAGACCTCATCAACATGGCAAAGTCGC
GCACGAACGTCATCCCCATCATCGAGGACGCGCGACACCCGCTGAAGTAT
CGTATGCTCGTGGGCATGGTCGACACTGTTTTCGCGGATGTTGCCCAGCC
GGATCAGGCGCGTATCGTGGCGCTGAACTCGCACTACTTCCTCAAGAACG
GAGGGCACTGCGTCATTTCCATCAAGGCATCGTGCGTCGACTCCACCGCG
TCACCGGAGGCCGTGTTTGCTCAGGAGGTTTCCAAGCTCAAGACGGAAAA
CTTCAAGCCAAAGGAGCAGGTTACCCTGGAGCCCTACGAGCGTGACCACG
CCGTAGTTATTGCGCTCTACCGCCCGCCCAAGAAATCGAAATCGAAGGAC
TGA
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