mRNA_E_fasciculatus_S2_contig8324.16466.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8324.16466.1 vs.
Match: Importin (N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD5_ECTSI) HSP 1 Score: 177 bits (448), Expect = 6.930e-54 Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 1
Query: 37 MEQLGPALSEFYAPTTSNERKQQLEQGLHAFQTQPNAHLTSLDILASIGQRREQEDLFVLYFCGTTIEGGIRRRWSAIPKEERLHVRKTLFQ 312
MEQLGPALSEFYAPTTSNERKQQLEQGLHAFQ QPNAHLTSLDILASIGQRREQE+LFVLYFCGTTIEGGI +RW+AIPKEERLHVRKTLFQ
Sbjct: 1 MEQLGPALSEFYAPTTSNERKQQLEQGLHAFQAQPNAHLTSLDILASIGQRREQENLFVLYFCGTTIEGGIPKRWNAIPKEERLHVRKTLFQ 92
BLAST of mRNA_E_fasciculatus_S2_contig8324.16466.1 vs.
Match: exportin-6-like (n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015ADE4D6) HSP 1 Score: 121 bits (303), Expect = 1.310e-30 Identity = 63/188 (33.51%), Postives = 104/188 (55.32%), Query Frame = 1
Query: 34 AMEQLGPALSEFYAPTTSNERKQQLEQGLHAFQTQPNAHLTSLDILASIGQRREQEDLFVLYFCGTTIEGGIRRRWSAIPKEERLHVRKTLFQYLATSHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHEATRLVGLALLSLVSEEFVRPDSPLPDVRKKELRASLVWAMPSILHVLA 597
++ L L+EF+ P T+NERK+Q+E+ L+ F QP +L+ L+S +VL +C T +E I + W +P ++ +R L +++ + H +P ++ KLGK +VD+G++ WP PDF + QLA T +GL L+ EEF P L RK+EL ++ +P +L++LA
Sbjct: 7 SLSTLEALLTEFFNPNTTNERKRQIEEVLNGFSNQPECWRHALNFLSSTSNE------YVLMYCLTVLEHIINKVWIRMPGPDKAELRTRLHRFMISHHLKVPNFICNKLGKLVVDIGRLDWPHFFPDFFMNIHQLAQAPETAPLGLMLIQTAFEEFTSPREDLAVTRKEELHRLMLEQVPVVLNILA 188
BLAST of mRNA_E_fasciculatus_S2_contig8324.16466.1 vs.
Match: exportin-6-like (n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F078E3) HSP 1 Score: 124 bits (310), Expect = 3.960e-29 Identity = 69/189 (36.51%), Postives = 103/189 (54.50%), Query Frame = 1
Query: 37 MEQLGPALSEFYAPTTSNERKQQLEQGLHAFQTQPNAHLTSLDILASIGQRREQEDLFVLYFCGTTIEGGIRRRWSAIPKEERLHVRKTLFQYLATSHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHEATRLVGLALLSLVSEEFVRPDSPLPDVRKKELRASLVWAMPSILHVLAEV 603
+ L +SEF+A +T+NERK+Q+E+ L+ F Q A L+ +V+ +C T E I R W IP E++L +R +L + L T H S+P ++ KL K LVD+G++ WP P+F TE+ QL T +GL +L SEE P L RK+EL + L+ +P+IL +L V
Sbjct: 9 LRSLEALMSEFFASSTTNERKRQIEELLNNFSAQSGAWRHCFFFLSHTCNE------YVMMYCLTVFENVINRTWIGIPMEDKLEIRNSLSKLLLTRHKSVPPFIRNKLVKVLVDIGRLDWPHYYPEFFTEIFQLIQQNGTSALGLIILQTTSEELACPREDLSVARKEELHSLLLQQVPTILSLLTGV 191
BLAST of mRNA_E_fasciculatus_S2_contig8324.16466.1 vs.
Match: Exportin-6 (n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2H3X4_ARAVE) HSP 1 Score: 122 bits (307), Expect = 9.330e-29 Identity = 64/188 (34.04%), Postives = 106/188 (56.38%), Query Frame = 1
Query: 34 AMEQLGPALSEFYAPTTSNERKQQLEQGLHAFQTQPNAHLTSLDILASIGQRREQEDLFVLYFCGTTIEGGIRRRWSAIPKEERLHVRKTLFQYLATSHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHEATRLVGLALLSLVSEEFVRPDSPLPDVRKKELRASLVWAMPSILHVLA 597
++ L ++EF++ TSNERK+Q+EQ L +F+ QP L+ L++ + FV+ +C T +E I + W +P ++ +R TL ++ T+H +P ++ KLGK +VD+G++ WP PDF + QLA T +GL L+ EEF P L RK+EL ++ +P +L++LA
Sbjct: 7 SLSALEALMTEFFSHNTSNERKRQIEQILDSFKNQPECWRHCLNFLSNTSNQ------FVMMYCLTVVEHIINQMWIRMPAPDKAELRTTLRIFMTTNHQKVPTFICNKLGKLIVDIGRLDWPHFYPDFFMNIHQLAQAPETAPLGLMLIQTAFEEFTSPREDLAVTRKEELHRLMLEQVPIVLNILA 188
BLAST of mRNA_E_fasciculatus_S2_contig8324.16466.1 vs.
Match: exportin-6-like (n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA81ED7) HSP 1 Score: 121 bits (304), Expect = 2.520e-28 Identity = 65/192 (33.85%), Postives = 114/192 (59.38%), Query Frame = 1
Query: 28 QCAMEQLGPALSEFYAPTTSNERKQQLEQGLHAFQTQPNAHLTSLDILASIGQRREQEDLFVLYFCGTTIEGGIRRRWSAIPKEERLHVRKTLFQYLATSHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHEATRLVGLALLSLVSEEFVRPDSPLPDVRKKELRASLVWAMPSILHVLAEV 603
Q ++ L ++EF++P+T+N RK+++E+ L+ F Q A SL +++ R E +V+ +C T +E I +RW + +++ +R TL+++L + H+S+P ++ KLGK +VD+G++ WP PDF T ++QL T VGL LL SEE P L RK+EL+ L+ +P++L ++ +
Sbjct: 5 QSSLRALESLMTEFFSPSTTNGRKREIEELLNNFSYQEGAWRHSLYFMSNT--RNE----YVIMYCLTMLEQLINKRWVGMLGQDKGEIRSTLYRFLLSHHSSVPPFIRNKLGKLVVDIGRLDWPHFYPDFFTNILQLTQSSETISVGLMLLQTASEELACPREDLSVSRKEELQRLLLEQVPTVLSIITNI 190
BLAST of mRNA_E_fasciculatus_S2_contig8324.16466.1 vs.
Match: exportin-6-like (isoform X1 n=3 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E1CE) HSP 1 Score: 115 bits (288), Expect = 3.480e-26 Identity = 63/184 (34.24%), Postives = 102/184 (55.43%), Query Frame = 1
Query: 34 AMEQLGPALSEFYAPTTSNERKQQLEQGLHAFQTQPNAHLTSLDILASIGQRREQEDLFVLYFCGTTIEGGIRRRWSAIPKEERLHVRKTLFQYLATSHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHEATRLVGLALLSLVSEEFVRPDSPLPDVRKKELRASLVWAMPSIL 585
++ L + EF++PTT+NE+K+Q+E+ L+ F Q + L L + +V+ FC T IE I R+W + E++ +R +L +++ + H +P ++ KL K +VD+G++ WP PDF T +MQL T ++GL L+ SEE + P L RK+ELR L+ M IL
Sbjct: 7 SLRSLEALMEEFFSPTTTNEKKRQIEELLNNFSQQRGSWKHCLYFLTNTSNE------YVMMFCLTVIENIINRQWISFAGPEKMELRGSLSKFMLSHHDHVPSFIRNKLVKLVVDIGRLDWPHFYPDFFTSIMQLVQQPQTMVLGLILIKTTSEEMISPREDLSVSRKEELRKLLLDQMAIIL 184
BLAST of mRNA_E_fasciculatus_S2_contig8324.16466.1 vs.
Match: exportin-6-A (isoform X1 n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P9A2A9_THRPL) HSP 1 Score: 115 bits (287), Expect = 4.690e-26 Identity = 68/182 (37.36%), Postives = 99/182 (54.40%), Query Frame = 1
Query: 58 LSEFYAPTTSNERKQQLEQGLHAFQTQPNAHLTSLDILASIGQRREQEDLFVLYFCGTTIEGGIRRRWSAIPKEERLHVRKTLFQYLATSHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHEATRLVGLALLSLVSEEFVRPDSPLPDVRKKELRASLVWAMPSILHVLAEV 603
+ EF++ TSN RK ++EQ LHAF +Q + L LA D +V +C TTIE I ++WSA+ EER +R L+Q L H S+ +V KL K +VDV ++ WP PDFLT ++QL + T +GL + SEE + L R++ELR L+ +P + +L V
Sbjct: 15 MKEFFSNETSNGRKHEIEQVLHAFSSQHGSWQHCLYFLA------HSADPYVCMYCLTTIETVINKQWSALAWEERAQLRTALYQLLLQRHTSVATFVRNKLVKLVVDVARLDWPHFYPDFLTNIIQLLQNADTVTLGLVFVQTSSEELISSREDLSVSRREELRRLLLQYVPQLFAILTGV 190
BLAST of mRNA_E_fasciculatus_S2_contig8324.16466.1 vs.
Match: Exportin-6-A,Exportin-6-B,Exportin-6 (n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812CPY1_SEPPH) HSP 1 Score: 113 bits (282), Expect = 2.230e-25 Identity = 60/189 (31.75%), Postives = 105/189 (55.56%), Query Frame = 1
Query: 28 QCAMEQLGPALSEFYAPTTSNERKQQLEQGLHAFQTQPNAHLTSLDILASIGQRREQEDLFVLYFCGTTIEGGIRRRWSAIPKEERLHVRKTLFQYLATSHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHEATRLVGLALLSLVSEEFVRPDSPLPDVRKKELRASLVWAMPSILHVL 594
+ ++ L ++EF+A TT+N RK+++E+ L+ F ++ L +A+ ++ +V+ FC T +E I ++W +++ +R TL QYL H +P ++ KL K +VD+G+ WP PDF + ++QL T +G+ LL SEE P L VRK+EL L+ +P++L++L
Sbjct: 5 EASLRALEALMTEFFAGTTTNGRKREIEELLNNFSQTQDSWKHCLFFMANT------QNEYVMMFCLTVLENVINKQWMGYSGTDKMDIRSTLNQYLYAHHNKVPSFIRNKLVKLVVDIGRSDWPHFYPDFFSSILQLVQESETTALGVILLQTTSEELTAPREDLSMVRKEELHRLLLTQVPTVLNLL 187
BLAST of mRNA_E_fasciculatus_S2_contig8324.16466.1 vs.
Match: exportin-6-B (n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1RR53_FRAOC) HSP 1 Score: 112 bits (281), Expect = 2.980e-25 Identity = 64/179 (35.75%), Postives = 97/179 (54.19%), Query Frame = 1
Query: 58 LSEFYAPTTSNERKQQLEQGLHAFQTQPNAHLTSLDILASIGQRREQEDLFVLYFCGTTIEGGIRRRWSAIPKEERLHVRKTLFQYLATSHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHEATRLVGLALLSLVSEEFVRPDSPLPDVRKKELRASLVWAMPSILHVL 594
+ EF++ TSN RK ++EQ LHAF +Q + L LA D +V +C +TIE I ++WSA+ EER ++ L+Q L H S+P +V KL K +VD+ ++ WP PDF T ++QL T +GL + SEE + L R++ELR L+ +P + +L
Sbjct: 15 MKEFFSNETSNGRKHEIEQVLHAFSSQQGSWQHCLYFLA------HSADPYVSMYCLSTIETVINKQWSALAWEERAQLKSALYQLLIQRHTSVPPFVKNKLVKLVVDIARLDWPHFYPDFFTNIIQLLQSAETISLGLVFVQTSSEELISSREDLSVSRREELRRLLLQHVPQLFAIL 187
BLAST of mRNA_E_fasciculatus_S2_contig8324.16466.1 vs.
Match: Putative (exportin-6 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JWD8_STIJA) HSP 1 Score: 107 bits (266), Expect = 2.820e-23 Identity = 67/190 (35.26%), Postives = 102/190 (53.68%), Query Frame = 1
Query: 58 LSEFYAPTTSNERKQQLEQGLHAFQTQPNAHLTSLDILASIGQRREQEDLFVLYFCGTTIEGGIRRRWSAIPKEERLHVRKTLFQYLATSHASLPRWVVTKLGKALVDVGKVSWPQEDPDFLTELMQLASHEATRLVGLALLSLVSEEFVRPDSPLPDVRKKELRASLVWAMPSIL----HVLAEVTTRI 615
++EF+A +TSN+RK+ +E+ L+ F +Q A L G R + +VL + + E I R+W + E+L +R L ++L T+H S+ + KL K LV +GK+ WP PDF ++QL + T +GL +L SEE V P L RK++LR L +PSI HVL E+ R+
Sbjct: 18 MNEFFAISTSNQRKKDIEELLNNFSSQQGAWHQCFYFL---GHTRNE---YVLMYTLSVFENLINRQWVGLRPAEKLEIRNVLTKFLLTNHKSMQLSIRNKLIKVLVCIGKLDWPHFYPDFFNNIIQLIQQQGTTSMGLQMLLTTSEELVSPREDLSADRKEQLRKLLEEQIPSIFGIITHVLIEIKPRV 201 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8324.16466.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8324.16466.1 >prot_E_fasciculatus_S2_contig8324.16466.1 ID=prot_E_fasciculatus_S2_contig8324.16466.1|Name=mRNA_E_fasciculatus_S2_contig8324.16466.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=205bp SRLSQHPLLQCAMEQLGPALSEFYAPTTSNERKQQLEQGLHAFQTQPNAHback to top mRNA from alignment at E_fasciculatus_S2_contig8324:3713..6661+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8324.16466.1 ID=mRNA_E_fasciculatus_S2_contig8324.16466.1|Name=mRNA_E_fasciculatus_S2_contig8324.16466.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2949bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8324:3713..6661+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8324:3713..6661+ >mRNA_E_fasciculatus_S2_contig8324.16466.1 ID=mRNA_E_fasciculatus_S2_contig8324.16466.1|Name=mRNA_E_fasciculatus_S2_contig8324.16466.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=615bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8324:3713..6661+ (Ectocarpus fasciculatus EfasUO2)back to top |