prot_E_fasciculatus_S2_contig831.16455.1 (polypeptide) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig831.16455.1 vs. uniprot
Match: D7G710_ECTSI (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G710_ECTSI) HSP 1 Score: 140 bits (352), Expect = 3.680e-42 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query: 1 MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRT 70
MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRT
Sbjct: 1 MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRT 70
BLAST of mRNA_E_fasciculatus_S2_contig831.16455.1 vs. uniprot
Match: A0A835ZC95_9STRA (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC95_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.610e-16 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 0
Query: 1 MSTGYRSSKGVLITCDVPTKQFIMSLDARLA--CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVR 67
MS S KGVLITCDVPTKQFI+ L+++ A +++DLD TH+FV+ +V EI+ +LE+L E NVYVR
Sbjct: 1 MSNVRTSRKGVLITCDVPTKQFILHLNSKQAQGFIINDLDETHLFVEASAVHEIREQLERLQEMNVYVR 69
BLAST of mRNA_E_fasciculatus_S2_contig831.16455.1 vs. uniprot
Match: A0A383WPN6_TETOB (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WPN6_TETOB) HSP 1 Score: 57.4 bits (137), Expect = 2.450e-9 Identity = 26/67 (38.81%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFIMSLD-----ARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRP 68
++ G L+TCDVPTK+F++ L+ + A ++ +LD TH+ VK+D V+ +Q +++ + KNVY P
Sbjct: 4 ATSGALLTCDVPTKEFLVWLNNQNKATKRAFIIKELDDTHLLVKEDMVEFVQEQVKAFNNKNVYTPP 70
BLAST of mRNA_E_fasciculatus_S2_contig831.16455.1 vs. uniprot
Match: A0A6T6HXU1_9STRA (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HXU1_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.130e-9 Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFIMSLDARLAC----VVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
+S G LITCDVPTKQ+I L+ A ++ DLDATH+ VKK + EI+R +E ++NV+
Sbjct: 36 ASAGYLITCDVPTKQYIQYLNEMKAVDKKFIIEDLDATHLLVKKKARAEIERRVESWMDENVF 98
BLAST of mRNA_E_fasciculatus_S2_contig831.16455.1 vs. uniprot
Match: A0A2V3IN38_9FLOR (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN38_9FLOR) HSP 1 Score: 57.8 bits (138), Expect = 4.410e-9 Identity = 26/62 (41.94%), Postives = 45/62 (72.58%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFIMSLDARLA--CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYV 66
++ GVLI+CD+P KQF++ +D + ++SDLD THV VK+ ++ I+ +L++L+E+N Y
Sbjct: 50 ATAGVLISCDIPVKQFLLHVDEKDTGKFIISDLDETHVLVKESALDYIKSQLDKLYEENQYT 111
BLAST of mRNA_E_fasciculatus_S2_contig831.16455.1 vs. uniprot
Match: M2VWH3_GALSU (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VWH3_GALSU) HSP 1 Score: 56.2 bits (134), Expect = 6.210e-9 Identity = 27/60 (45.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query: 9 KGVLITCDVPTKQFIMSLDARLA---CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
+GVLITCD+P KQFI+ LD A V+++LD T +F++ ++K +Q +LE+L+E+N +
Sbjct: 6 RGVLITCDIPMKQFILKLDEDQAPNRFVIANLDETSLFIQSWALKLVQEKLEELYEENYF 65
BLAST of mRNA_E_fasciculatus_S2_contig831.16455.1 vs. uniprot
Match: I0Z2U2_COCSC (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z2U2_COCSC) HSP 1 Score: 53.1 bits (126), Expect = 1.070e-7 Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 0
Query: 9 KGVLITCDVPTKQFIMSLD----ARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPR 69
+GVL+ CDVPTK+FI+SL+ V+ DLD T +FV+ V+ +++ L++ +E+N Y PR
Sbjct: 2 RGVLLQCDVPTKEFILSLNDSKPTNERFVILDLDDTRLFVQPTVVEWLEKRLKEFNEENTYQPPR 66
BLAST of mRNA_E_fasciculatus_S2_contig831.16455.1 vs. uniprot
Match: A0A1X6PEZ7_PORUM (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEZ7_PORUM) HSP 1 Score: 51.6 bits (122), Expect = 4.130e-7 Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0
Query: 7 SSKGVLITCDVPTKQFIMSLDARLA---CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
++ GVL+TCDVP KQF++ LD A +V+ LD TH+F+ +V I+ +LE+L +N Y
Sbjct: 4 ATHGVLVTCDVPVKQFLLKLDNDRAPDRFIVAKLDETHLFIHAWAVDMIKDQLERLFAENQY 65
BLAST of mRNA_E_fasciculatus_S2_contig831.16455.1 vs. uniprot
Match: A4S7H4_OSTLU (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7H4_OSTLU) HSP 1 Score: 50.8 bits (120), Expect = 9.550e-7 Identity = 29/63 (46.03%), Postives = 37/63 (58.73%), Query Frame = 0
Query: 10 GVLITCDVPTKQFIMSLD----ARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRP 68
GV+IT DVP KQ+I+ L+ A VV DLDA V V+ D+V I RE+E + YV P
Sbjct: 7 GVMITADVPIKQYILHLNDVAPAERKFVVVDLDARRVLVQPDAVDAIHREIEAFQQSTQYVAP 69
BLAST of mRNA_E_fasciculatus_S2_contig831.16455.1 vs. uniprot
Match: B5Y3U5_PHATC (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3U5_PHATC) HSP 1 Score: 50.8 bits (120), Expect = 2.100e-6 Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0
Query: 8 SKGVLITCDVPTKQFIMSLD----ARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
S G L++CDVPTKQFI L+ ++ DLDATH+ V+ + EI+R++E+ + NV+
Sbjct: 37 SAGYLVSCDVPTKQFIQHLNDLKPVDKKFILQDLDATHLLVELKARDEIRRKVEEWEDSNVF 98 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig831.16455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 16
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E_fasciculatus_S2_contig831.16455.1 ID=prot_E_fasciculatus_S2_contig831.16455.1|Name=mRNA_E_fasciculatus_S2_contig831.16455.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=71bpback to top |