prot_E_fasciculatus_S2_contig8302.16450.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8302.16450.1
Unique Nameprot_E_fasciculatus_S2_contig8302.16450.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length86
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8302.16450.1 vs. uniprot
Match: D7G3W7_ECTSI (Vps54_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W7_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 1.900e-7
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:   26 RDVPWAVIKVRSETEIIRCLDPRFFVEDFDPITKI 60
            + VPWAVIKVRSETEIIRCLDPRFFVE    + ++
Sbjct:   22 KQVPWAVIKVRSETEIIRCLDPRFFVEGEKDVARL 56
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8302.16450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3W7_ECTSI1.900e-771.43Vps54_N domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8302contigE_fasciculatus_S2_contig8302:4411..5741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8302.16450.1mRNA_E_fasciculatus_S2_contig8302.16450.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8302 4411..5742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8302.16450.1 ID=prot_E_fasciculatus_S2_contig8302.16450.1|Name=mRNA_E_fasciculatus_S2_contig8302.16450.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=86bp
AVSAPLQQLARVSTDAGDGDDSDSDRDVPWAVIKVRSETEIIRCLDPRFF
VEDFDPITKILDDLPDLGHSSLSLSAAGEAGGLGGK
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