mRNA_E_fasciculatus_S2_contig83.16445.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig83.16445.1 vs.
Match: Flagellar (outer dynein arm light chain 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU73_ECTSI) HSP 1 Score: 263 bits (672), Expect = 5.050e-89 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 1
Query: 1 MAEEPRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLNIPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 396
MAEEPRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLN+PRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE
Sbjct: 1 MAEEPRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 132
BLAST of mRNA_E_fasciculatus_S2_contig83.16445.1 vs.
Match: Flagellar (outer dynein arm light chain 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA97_9STRA) HSP 1 Score: 196 bits (497), Expect = 2.420e-62 Identity = 92/132 (69.70%), Postives = 111/132 (84.09%), Query Frame = 1
Query: 1 MAEEPRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLNIPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 396
M E +G V+++VLPTY+ KP+EDE FYP++ KA++EK V+ EL KEYD +EAKEWSLNIAD IRE +K L+IPRYK+VVQVT+GQMKDQGVRVASRCLWDTATDNYASV +K QSLWC+ M FG+YTE
Sbjct: 1 MEESQPKGRQVIDVVLPTYVMKPAEDEVFYPAKAKAMSEKIVKAELGGKEYDEQEAKEWSLNIADAIREQIKQLSIPRYKVVVQVTVGQMKDQGVRVASRCLWDTATDNYASVNYKTQSLWCNVMCFGIYTE 132
BLAST of mRNA_E_fasciculatus_S2_contig83.16445.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C1_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.960e-59 Identity = 91/133 (68.42%), Postives = 109/133 (81.95%), Query Frame = 1
Query: 1 MAEEPRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKT-LNIPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 396
M EEP G P+VE+VLPTYI P+EDEKFY S+VKA+AE+ ++ EL+ KEY+ EAK WS+ I D +RE VK NIPRYK+VVQV++GQMKDQGVRVASRCLWDT TDNYASV +KN +LWCS MVFG+YTE
Sbjct: 1 MNEEPMPGQPIVEVVLPTYIMNPAEDEKFYQSQVKAIAERILKEELEGKEYEENEAKLWSITICDRVREHVKEECNIPRYKVVVQVSLGQMKDQGVRVASRCLWDTNTDNYASVSYKNHTLWCSCMVFGIYTE 133
BLAST of mRNA_E_fasciculatus_S2_contig83.16445.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVI1_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.150e-52 Identity = 80/128 (62.50%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLNIPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 396
PR G V+E++LPTY KP EDEKFYPS+ KA+ E ++ L +EYD E AKEW NI + I++ VKTLNIPRYK++ Q+TIGQ++DQGV +ASRCLWD A DNYASV F N SLW +AMVFGVYT+
Sbjct: 11 PRPGQRVIEVILPTYAMKPGEDEKFYPSKAKAICEDILRTTLAGQEYDEELAKEWVTNIGNDIKDKVKTLNIPRYKVICQITIGQVRDQGVSIASRCLWDVAHDNYASVNFSNDSLWANAMVFGVYTD 138
BLAST of mRNA_E_fasciculatus_S2_contig83.16445.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FB08_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.780e-51 Identity = 86/130 (66.15%), Postives = 101/130 (77.69%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEE-AKEWSLNIADTIREGVKT-LNIPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 396
PR G ++E+VLPTYI KP E E FYPS VK +A ++ EL K YD EE AK+W+ I + I+ VK +IPRYKI+VQVT+GQMKDQGVRVASRCLWDTATDNYASV++ NQ LWCSAMVFGVYTE
Sbjct: 18 PRPGQSIIEVVLPTYIMKPEETEIFYPSHVKRIAGAILEEELAGKMYDDEEEAKKWNTTICEKIKAQVKAECDIPRYKIIVQVTLGQMKDQGVRVASRCLWDTATDNYASVEYANQHLWCSAMVFGVYTE 147
BLAST of mRNA_E_fasciculatus_S2_contig83.16445.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3X956_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.870e-51 Identity = 82/129 (63.57%), Postives = 104/129 (80.62%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKT-LNIPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 396
PR G PVV++VLPTYI KP+E+E FYPSE+K +AE V+ EL K YD +++KE ++ I I+E +K N+PRYKIV+QVTIG+MK+QGVRVASRCLWD TDNYASVQ+ NQ LWC+AMVFG++TE
Sbjct: 23 PRAGQPVVDVVLPTYIMKPAENEIFYPSEIKKIAEAVVKSELDGKLYDEDDSKESNVLICGKIKERIKEKCNLPRYKIVIQVTIGEMKNQGVRVASRCLWDNITDNYASVQYTNQHLWCTAMVFGIFTE 151
BLAST of mRNA_E_fasciculatus_S2_contig83.16445.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ5_AURAN) HSP 1 Score: 163 bits (413), Expect = 1.550e-49 Identity = 77/128 (60.16%), Postives = 98/128 (76.56%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLNIPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 396
PR G V+E+VLPTY P+E EKFYPSE K + E+ + +L++ YD E AKEW L I +TI+ +K+LNIPRYK+VVQVTIGQMKDQGV VASRCLWD + DNYASV + N++LW + MVF +YT+
Sbjct: 6 PRPGQQVIEVVLPTYSMNPTEVEKFYPSEAKQICERVLTGQLENATYDDESAKEWILLIGNTIKSEIKSLNIPRYKVVVQVTIGQMKDQGVSVASRCLWDISNDNYASVNYTNETLWANVMVFVIYTD 133
BLAST of mRNA_E_fasciculatus_S2_contig83.16445.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN77_AURAN) HSP 1 Score: 162 bits (409), Expect = 6.480e-49 Identity = 77/130 (59.23%), Postives = 96/130 (73.85%), Query Frame = 1
Query: 7 EEPRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLNIPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 396
E PR G V+E+VLPTY P+E E+FYPSE K + E+ + EL +KEY + AK+W ++I +TI+ +K L +PRYKI+VQVTIGQMKDQGV VASRCLWD DNY SV F N SLW + MVFGVYT+
Sbjct: 5 EGPRPGQQVIEVVLPTYSMIPAEQERFYPSEAKRICERVLVGELDNKEYFEDSAKDWIISIGNTIKSEIKCLTVPRYKIIVQVTIGQMKDQGVSVASRCLWDITFDNYTSVNFTNSSLWANVMVFGVYTD 134
BLAST of mRNA_E_fasciculatus_S2_contig83.16445.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8SDH5_9STRA) HSP 1 Score: 161 bits (407), Expect = 1.230e-48 Identity = 76/132 (57.58%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 1 MAEEPRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLNIPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 396
M + R G V+EI+LPTY KP+EDEKFYPS+++ + +A++ EL +KEY + AK+W L I + I+ K+LN+PRYK++VQVTIGQMKDQGV VASRCLWD DNY SV + N SLW +AMVFG+YT+
Sbjct: 1 MQDGARPGQQVIEIILPTYSMKPAEDEKFYPSKIRQICTEALKDELDNKEYFEDGAKDWILTIGNKIKAQAKSLNLPRYKVIVQVTIGQMKDQGVSVASRCLWDLLFDNYTSVNYTNSSLWANAMVFGLYTD 132
BLAST of mRNA_E_fasciculatus_S2_contig83.16445.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YER0_9STRA) HSP 1 Score: 149 bits (375), Expect = 9.320e-44 Identity = 74/126 (58.73%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 22 GPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKT-LNIPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 396
GP + PTYI KP EDE+FYPS+V+ +A++ + EL+ K Y+ EE+K+ SL + + I+E VK NIPRYKIVVQVTIG+M+DQGVRVASRCLWDT+TDNY S + N SLW A+VFG YT+
Sbjct: 8 GPREIIDYKPTYILKPEEDERFYPSQVQKIAKEVLLAELEGKTYNEEESKDLSLGLCELIKERVKEGTNIPRYKIVVQVTIGEMRDQGVRVASRCLWDTSTDNYTSATYTNTSLWAVAIVFGCYTD 133 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig83.16445.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig83.16445.1 >prot_E_fasciculatus_S2_contig83.16445.1 ID=prot_E_fasciculatus_S2_contig83.16445.1|Name=mRNA_E_fasciculatus_S2_contig83.16445.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=133bp MAEEPRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEback to top mRNA from alignment at E_fasciculatus_S2_contig83:37366..41708+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig83.16445.1 ID=mRNA_E_fasciculatus_S2_contig83.16445.1|Name=mRNA_E_fasciculatus_S2_contig83.16445.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4343bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig83:37366..41708+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig83:37366..41708+ >mRNA_E_fasciculatus_S2_contig83.16445.1 ID=mRNA_E_fasciculatus_S2_contig83.16445.1|Name=mRNA_E_fasciculatus_S2_contig83.16445.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=399bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig83:37366..41708+ (Ectocarpus fasciculatus EfasUO2)back to top |