|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8274.16423.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI) HSP 1 Score: 672 bits (1735), Expect = 9.750e-237 Identity = 380/520 (73.08%), Postives = 389/520 (74.81%), Query Frame = 1
Query: 1 EGEQRGAVDVAQ-ATATQPAHTPGAAAGPADETASPLPREGSNSTSPKTSEMDSTPPEGAIAEQSHEKTSETETGQSDKTSDANREIRRRKTMELMSQGGLHLKDILADPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLETGSTEEKIPFDHFQRGLRILGLTIPEEDEREIFKTFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSG------DGEIGIDEAAARMAGEVAQAQLPTEQPRYPLGNLIYEGSKLFWRTGESLRIAMHENKEKHCVAISTMLEGESDPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQSLPEDARAKLFDKARASVLSDYLLARLKLIDGGDADGSVTDTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQETPAGPVEPPGEESLPVTKSDSIFPRGTPTPVVVKLPEDDGGGSGSFLLEDELVFSEVHTFSKHVSYKDFKRVENEVSEGLKDGHERIANAEKAQRRAHGSLENPYHRTSA 1539
EGEQ GA DVAQ A ATQP T GAAAGPADETA P PR+GSNSTS K RE RKTMELMSQGGLHLKDIL DPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLET FDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSG DGEIGIDEAAARMAGEVAQAQLP EQPR+PLG LIYEGSKLFWRTGESLRIAMHENKEKHC+AISTMLEGES+PFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQ LPEDARAKLFDKARASVLSDYLLARLKLIDG DADG+ TDTQA ETPA PVEPPGE SLPVTKSDSIFP GTPTPVVVKLPEDDGG SGSFLLEDELVFSE+HTFSKHVSYKDFKRVENEVSEGLKDGH+RI NA+KAQRRAHGSLENP+HRTSA
Sbjct: 28 EGEQCGAADVAQPAMATQPTTTQGAAAGPADETAPPSPRQGSNSTSRKV-----------------------------------REAPARKTMELMSQGGLHLKDILGDPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLET----------------------------------FDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGGHGKRGDGEIGIDEAAARMAGEVAQAQLPPEQPRFPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQRLPEDARAKLFDKARASVLSDYLLARLKLIDGRDADGNATDTQASAAAISAAARLGLGGVGPGTAPESASTARAPETPAEPVEPPGEVSLPVTKSDSIFPIGTPTPVVVKLPEDDGGESGSFLLEDELVFSELHTFSKHVSYKDFKRVENEVSEGLKDGHDRIENADKAQRRAHGSLENPHHRTSA 478
BLAST of mRNA_E_fasciculatus_S2_contig8274.16423.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI) HSP 1 Score: 120 bits (301), Expect = 2.330e-26 Identity = 77/260 (29.62%), Postives = 132/260 (50.77%), Query Frame = 1
Query: 322 DPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLETGSTEEKIPFDHFQRGLRILGLTIPEEDEREI---FKTFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGDGEIGIDEAAARMAGEVAQAQLPTEQPRYPLGNLIYEGSKLFWRTGESLRIAMHENKEKHCVAISTMLEGESDPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQSLPEDARAKLFDKARASVLSDYLLARLKLIDGGDADG 1092
+ + D +PVE ++ ++ + KE G + +LF F G E + F+ LR LG + DE E+ FDTDG+GT+EL EF+ +CL I ++ W+AE+ RR ++ + + + A R + A P+G L+++GS+ FWR+ E++ +A+H N ++ + IST +P + VD I V+ +AV A G+ +S+ +D R + DKA ++ +YL R + G + G
Sbjct: 103 EAAGDVSPVEKLQVLLTKAKERGMSAERLFEHFAPGG--EASVTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRLNNAESKDELNVAARKIARRRSSLRA----------VPIGELVHQGSRFFWRSKETIDVALHLNADEGLMTISTRCPERGYNYPAIFVDVSKIPVHKTEAVARANAV------GQFESMSKDERREATDKAMTALRVEYLQHRWRKSGGYNFHG 344
BLAST of mRNA_E_fasciculatus_S2_contig8274.16423.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BJX7_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.200e-23 Identity = 82/275 (29.82%), Postives = 128/275 (46.55%), Query Frame = 1
Query: 322 DPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLETGSTEEKIPFDHFQRGLRILG----LTIPEEDEREIFKTFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGDGEIGIDEAAARM-----AGEVAQAQLPTEQPRYPLGN----------LIYEGSKLFWRTGESLRIAMHENKEKHCVAISTMLEGESDPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEI--------QSLPEDARAKLFDKARASVLSDYLLARLK 1065
D +D T ++ M ++M + KE G + Q+F F + E P D FQ GL LG TI E++ EIF+ D DG GTI++ EF C +I +AWKAE++R S + + E A +G E R+ + +IYEG+KLFWRT E + I MHE HC+ + + + P + ++ +I +D E + E A + E + L +D A++ + R +LS+Y+L RL+
Sbjct: 13 DFKDDDTGIKKMWTVMTKAKESGMSVDQIFTFFKSSSGGSEIGPLD-FQEGLAALGPAITKTITEDELSEIFQDLDDDGGGTIDVDEFKAHCYNIPRLAWKAEKIRFEREKTKSIEDAAKMAEREATNLPLTPSGSTGAIMHALEDHRHQKDSAAAANMQSKEVIYEGTKLFWRTHEKIDIVMHEYSALHCIVMCSYNATTDEAHPNIIINKTMIEDTIED---EAVQEQLSAQRQEYCLRKQIVGRKLTDDEEAEVEESVRRGILSNYILLRLQ 283
BLAST of mRNA_E_fasciculatus_S2_contig8274.16423.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI) HSP 1 Score: 106 bits (265), Expect = 1.150e-20 Identity = 67/216 (31.02%), Postives = 109/216 (50.46%), Query Frame = 1
Query: 463 FQRGLRILGLTIPEEDEREIFKTFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSG-DGEIGIDEAAARMAGEVAQA----------QLPTEQPRYPLGNLIYEGSKLFWRTGESLRIAMHENKEKHCVAISTMLEGESDPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQSLPEDARAKLFDKARASVLSDYLLARLKLIDG 1077
FQ GL LG I E+ ++F D +G G+I+L+EF R+CL+I +M WKAER RR G +G DG+ +++AA MA E A +L +P LG + Y G K FWRT + + + + N+ K +AI E++ LK + ++A+K + ++ +A L +KA + ++DY++ R+ + DG
Sbjct: 302 FQHGLATLGFNISTEETAKMFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEDGDRELEKAARDMANETVSANDAAEGGLGGELAKLEPLVHLGKIFYRGEKFFWRTKDLIEVVVQLNEAKGFLAIPASAAAEAEILNDLKAKRLAAKTEHAMGGSGSRGGESDANKEQAGDQQQEDQA-LSEKAHMAYIADYIVHRITMPDG 516
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8274.16423.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
| Match Name | E-value | Identity | Description | |
| EF-hand | 9.750e-237 | 73.08 | domain-containing protein n=1 Tax=Ectocarpus silic... | [more] |
| EF-hand | 2.330e-26 | 29.62 | domain-containing protein n=1 Tax=Ectocarpus silic... | [more] |
| Hypothetical | 1.200e-23 | 29.82 | protein n=1 Tax=Florenciella parvula TaxID=236787 ... | [more] |
| EF-hand | 1.150e-20 | 31.02 | domain-containing protein n=1 Tax=Ectocarpus silic... | [more] |
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 0 |
| Seed ortholog score | 679.5 |
| Seed ortholog evalue | 1.2e-192 |
| Seed eggNOG ortholog | 2880.D8LCP2 |
| Model size | 1539 |
| Hectar predicted targeting category | other localisation |
| Exons | 11 |
| EggNOG OGs | 2E61A@1,2SCSX@2759 |
| Cds size | 1539 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842487.6147313-CDS-E_fasciculatus_S2_contig8274:371..512 | 1696842487.6147313-CDS-E_fasciculatus_S2_contig8274:371..512 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8274 372..512 - |
| 1696842487.6321778-CDS-E_fasciculatus_S2_contig8274:991..1313 | 1696842487.6321778-CDS-E_fasciculatus_S2_contig8274:991..1313 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8274 992..1313 - |
| 1696842487.6490037-CDS-E_fasciculatus_S2_contig8274:1597..1713 | 1696842487.6490037-CDS-E_fasciculatus_S2_contig8274:1597..1713 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8274 1598..1713 - |
| 1696842487.6576576-CDS-E_fasciculatus_S2_contig8274:2214..2355 | 1696842487.6576576-CDS-E_fasciculatus_S2_contig8274:2214..2355 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8274 2215..2355 - |
| 1696842487.6668932-CDS-E_fasciculatus_S2_contig8274:2655..2763 | 1696842487.6668932-CDS-E_fasciculatus_S2_contig8274:2655..2763 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8274 2656..2763 - |
| 1696842487.676562-CDS-E_fasciculatus_S2_contig8274:3358..3433 | 1696842487.676562-CDS-E_fasciculatus_S2_contig8274:3358..3433 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8274 3359..3433 - |
| 1696842487.687955-CDS-E_fasciculatus_S2_contig8274:3605..3713 | 1696842487.687955-CDS-E_fasciculatus_S2_contig8274:3605..3713 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8274 3606..3713 - |
| 1696842487.6969268-CDS-E_fasciculatus_S2_contig8274:4164..4266 | 1696842487.6969268-CDS-E_fasciculatus_S2_contig8274:4164..4266 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8274 4165..4266 - |
| 1696842487.7066314-CDS-E_fasciculatus_S2_contig8274:4727..4887 | 1696842487.7066314-CDS-E_fasciculatus_S2_contig8274:4727..4887 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8274 4728..4887 - |
| 1696842487.7172036-CDS-E_fasciculatus_S2_contig8274:5761..5886 | 1696842487.7172036-CDS-E_fasciculatus_S2_contig8274:5761..5886 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8274 5762..5886 - |
| 1696842487.7261074-CDS-E_fasciculatus_S2_contig8274:6272..6413 | 1696842487.7261074-CDS-E_fasciculatus_S2_contig8274:6272..6413 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8274 6273..6413 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8274.16423.1 >prot_E_fasciculatus_S2_contig8274.16423.1 ID=prot_E_fasciculatus_S2_contig8274.16423.1|Name=mRNA_E_fasciculatus_S2_contig8274.16423.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=513bp
EGEQRGAVDVAQATATQPAHTPGAAAGPADETASPLPREGSNSTSPKTSE MDSTPPEGAIAEQSHEKTSETETGQSDKTSDANREIRRRKTMELMSQGGL HLKDILADPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLETGSTEEKI PFDHFQRGLRILGLTIPEEDEREIFKTFDTDGSGTIELSEFIRWCLDIDT MAWKAERVRRTTGGQTSGDGEIGIDEAAARMAGEVAQAQLPTEQPRYPLG NLIYEGSKLFWRTGESLRIAMHENKEKHCVAISTMLEGESDPFPVLKVDS RLIRVNGKDAVLERIAEMTEADKGEIQSLPEDARAKLFDKARASVLSDYL LARLKLIDGGDADGSVTDTQASAAAVSAAARLGLGGVGPDTDPESASAAQ AQETPAGPVEPPGEESLPVTKSDSIFPRGTPTPVVVKLPEDDGGGSGSFL LEDELVFSEVHTFSKHVSYKDFKRVENEVSEGLKDGHERIANAEKAQRRA HGSLENPYHRTSA back to topmRNA from alignment at E_fasciculatus_S2_contig8274:372..6413- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig8274.16423.1 ID=mRNA_E_fasciculatus_S2_contig8274.16423.1|Name=mRNA_E_fasciculatus_S2_contig8274.16423.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6042bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8274:372..6413- (Ectocarpus fasciculatus EfasUO2) GAAGGAGAGCAGCGCGGAGCGGTAGATGTAGCGCAAGCCACCGCCACACA
ACCAGCACACACACCAGGAGCGGCAGCAGGACCTGCAGACGAAACAGCAT
CGCCGTTACCACGAGAAGGCAGCAACTCCACGTCCCCGAAGGTTCGTGAA
GCTCCGGCAGGGTGAAATTCAGCCTTCTGTTGTTTTGGCTTCGGCATCAA
ACGTCGAAAACGTAGCATGTGAAAGGACCCTTCTCTTTTCCTGTCTTGTG
AATATTCGCTCGGATTTTTTTAGTGTAGAGCACCACTCATGTTTGACGAG
GAGACATTGGTCACGGAATCGATCGCGATGGAGGTAAGGTGACCGACTAT
CCCCAATGTACACTCAGAGCGACCTTCCCCCGTATTCCTTGGCGCCGAAG
TCTTGTTTTGTTCGACCCCAACCCCGCCGGTATGATTCGAATCACGCCGT
AAGACAGGTTAGTCCCGTGGGCAACATCATCAACCTTACCCCTCCTTTTT
CCGCTTTCGGGTTCGTCCAACGTCCAGACCTCGGAGATGGATTCTACGCC
GCCGGAAGGAGCGATTGCGGAACAATCGCACGAGAAGACGTCAGAAACCG
AGACGGGGCAGTCAGACAAGACCAGCGATGCCAATCGCGAGATCAGGAGA
AGGTGCGACAAAGGGGAGGTGACCAAGTACGCTTTATTGTCCCTCATACT
GTAGTAATGACCGGCACGGTCGCGTGTTTTTCAGATGATGGTTACTTGCT
CCACGAGCTGCTCGTGCCCTTCCATGGCGTGTAACCTTTGTGCGAGACAA
AAGCCGGTCATTGCTTACCTTTGCATGCAGATACCTTACACCATAGGTCC
GAAACGTTCTTTGGGATTCCAATGCCGTCCGCGTCAACACCGATAGTCGC
TTCTGATAGTCCTCGACTATGACGAGGTAGTGTACTGACAGCTCTTCCAT
AGTGCTTGACCTGCTTTCAAGCTTTTCGCGGAACTTGGACGGTAAACTCC
TTGACAGTCACGATTTGTTTGCTTTACGAAAGTCTTGTGAAAACCAGCAA
AAACTTATTCACGGTGTTTCAGAACCGAGCCTTTGTTCATACTTTCCTAC
CACGTTTCACAGTCGATACACACGCCCCCCAACTACACACCGCTCTTGGA
CATTGCACTGTTCCCAAAGCATTGAGGGTAACCCATGTTTTTGAGAAACA
CTTTCAGCAATATGATTCTCAGCCGCCTACAACGTGTTATTTCAGTAGCG
TTCCGTCAGCAGAAACAGGACAACAGTGCGATATCAATTCCGTATGGTCG
AGGCCTTCGTCATTCTACCCCTCCCCCTCTCCGTCCTTAGCTCGGATGCC
GAAACGGTGTACGACGTAGCTTGGCACTCAAGAACGACGATGTTGGCGGC
ACAAGACGCACCAGTCCAACGCTGCCATCGTCGGCAGCTAGATGGTGGCG
TCGAGCGACAGCACAGCAACGGCAACACTGCCTCTGCCCCGACGTCACCC
CCCCGTCTCGCTGCTCGACGACACAGAAAAACGATGGAGCTCATGAGCCA
AGGCGGACTGCACCTCAAGGATATCCTCGCAGACCCGAGCAACGACAGCA
CTCCGGTGGAGGCGATGAGATCCATTATGGTCCGCGGGAAGGAGCACGGC
TGGACAACGTCTCAGCTCTTCGGCGTCTTTCTCGAGGTATAAAAAAAGAC
GGAAGGTGCTTGTGGATTGTCGCGTTGGCTCTCAAGCGTCGAGGTATGTA
CAGTTGAGGCAACATATATTTGTATAGACATGCACCGTTTGTGGTCAACG
CCTCCTCCAAGGACGTTCCGCCCGCAACAGGAGGGCTAGACAGTACGGCA
TGTGTCTTCGAACACAAAATAATACCCGTTGTACATATGTAGACCATATA
CCTATAAACTTCCCACCTAGTTCGATCTCATGGCGCTCATGGCACGATTT
CGTGCACTACCGTAGTATGGAAGCAAGGCGCTCGTGGAAAAACTTCGTTC
TCACTGCCACACCCAATGTTAGGGTTTCAGCACCGAGCCGGCCGCGACGC
GCACCCCTCAGCTGTAACTCTCGCCTTTCCGCGCCAAATTGTCTCGTCGG
GCAAAACCACAACGACGACGACGACGACACAACAACAATGACGAAAGACT
GGTAGCACGGAAGAGAAGATCCCGTTCGACCACTTTCAGAGGGGGCTTCG
CATACTGGGGCTGACCATCCCCGAGGAAGACGAGCGGGAAATATTCAAGG
TGAAGCGTGTGGGCTTTGTCAATGCAGAGCGCAGGTTAGGGGGGGGAGGG
GGGCGGAGGAGGGGGAGGGGTCGCGTGCGTTCCGATGTTTCATGTGGGGG
GGTCATTCAAAAGGGGGAAATGAGGATACACGCTTGAGGCACGCCATGCG
AGCAGGGGCTCACGCGCGCAGCTGCTTGACTCTTCGGCTCAATCACAGCA
AGCAAACTTCCGACCCCGCTTCCACGCACCGTTCGTTGGGTCCACGTCAC
CCCTCTTCTCGTCCCCACAACCGCGTGCATCTGCCGTAGTCGCCTGATCT
GTCCGTTTCGGAAATATGACAGGCGTTCGAGAGCATCTCCGGAGATTCGC
GTGGTGCTTTGCTCCGCCCTTCTCCAAGCATTAAGCGTTGTTTTCAGGCT
GTTTGTAAACCCTGCCCCCGCCTTTGATCCGCGTTTGCTTGCCGCAAAAG
ACTTTCGATACGGATGGCAGCGGTACGATAGAGCTGAGCGAGTTTATCCG
CTGGTGCCTCGACATCGACACGATGGCCTGGAAGGCCGAACGTGTCCGAA
GGACGACGGTAGGCTGTGTCTCTCGGCTTGGTTGTTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGCCCCTAACCCCGGCGAAATTCGT
CCGATCGAAAGAGGTGCCAGGTTCTATGGCTTCGGTACTCCCTTTACCCC
CGCTTCCCTTCCCGCTCCACCGTGAACTAGGGGGGGCAGACCAGTGGCGA
CGGGGAAATCGGCATCGATGAGGCAGCAGCTAGGATGGCCGGTGAGGTAG
CACAGGTGGGTGGATGGGTGGGTGGATGGGTGGCAAGGAAACTTCAACTA
TACTGGTGGGGCGTGTCCTTGTAGAGGCACCTTTTTATTTCGGCCGCACC
AATTCCATCGGTCTCCGGAGTAGCACCGCTTCCATCTCTCCTCTTCTATC
AACCGTGTGCACCCTTGTTTTCCAATTGGCATCGCCCCCCGCCGTCGTGA
TACAATACCGAACCAGGTGTGGTATTTGACTATGCTCATGCACTCGCCTA
CCGTTCGCAACGAGATTGAATACCTCTCGAGGTACGATGCTCAGATCGCC
GAGTACGTTTGCTTGCACTCACCCCGCACCAAATAAGGGGATTCAAAAAG
CTAAATCCTTACGAGACCGACCCGCGCTCACCCGTAGTTGCAAAGGAAAA
TCCACCGAAGGCAAGACGACCATGATTTCGAAGTTCTAAGCAATCATACG
CTGGGGTTGTCTAGGAATATGCCGGACTACTTTCATTCTTTCCATCGCTG
CAGATGTCGTTACGTCCACCGGGGGGGGCGGGGGGCGTCTTACGTGCTTT
CCTCGGACGGTTTGGGTCCAGCCTCCGATTTTGCACCTATTGCCCCTCAG
GCACAGCTGCCTACGGAGCAGCCCCGATACCCCCTGGGAAACCTAATCTA
CGAGGGATCCAAGCTATTCTGGAGGACCGGAGAGAGTCTACGAATCGCCA
TGCACGAGGTGTGAGATTTCCTCGCTGTCGTTTCTCTTGACATCGCTGTA
GTCGCAGACGTGTACATCGTGTACATCGTGGAGACAAAATATCCGACCCG
TACCGCCCGGCCCCGTGAAACCAAGCGTTGCCAACACGACTGGAATCATC
GAAACCACAGAGCGGATTCTTCACCATGTCCTTTCGAGTCGATTGCCATC
CGCAGGGGACGCTACCCACCATATTGATATCGGATTTTTGCCAACTCGCT
TTTTCGATTCGTGTTTCACCACCAACTTGCCTCGGCTTTCCAACGTGCTG
CGCGTCAGAACAAGGAGAAGCATTGCGTAGCGATCTCCACGATGCTTGAG
GGGGAGTCAGACCCCTTCCCGGTGCTGAAGGTGGACTCTAGGCTGATTCG
TGTCAATGGAAAGGATGCGGTGCTCGAGAGGATTGCCGAGATGACGGAAG
TGAGTTCGGCGGTTGCCACGGTTGAAGTTGTTCGTTGTGGTCGTACGATG
TCTTTGTCAGTTCCCGTCGTGAGATTCGGATGTGATGCAAGCTTGACCTC
ATGGGACAGGAACCAATACTGCGAAATTGGGCTTCTCTAACACTAACCCA
AGCCTGAACAGTCTATGCCCCCAAAACGGCGTCCGAATGAGCAAATGGTG
CAATCTTCTTCGTCCCACCACGTAGACTGCGTAAAGAATCACGAATCGGG
TCAAGATGTCGATCACGCAGATATTATGTTTGTTGCACAAAACATTTCGT
CAACTCATGTCGTAGCCGTACGTGACAAAAAAGAAGGTGCATGCCCCCAA
CAACCCACACCACACCACAATTTTGGCTTCCAGCTTGGTAAGGGTGCCAT
CCCACGTTGTTACAGCGGGAGCGGCCAGAGAAAACATTTGTGGTTCATGG
ATAATATAATAAAACCCCTCTGTCACTTTCCTTGTCTTCGACGATGGAAG
GCGGACAAAGGCGAAATTCAAAGCTTGCCAGAGGACGCCAGGGCAAAGCT
TTTCGACAAAGCCAGGGCTTCCGTTCTCTCGGACTACCTGCTGGCCAGAC
TCAAGCTGATCGATGGGTGAGGTCGGATTTGTACTAGGTTTCTCAATACT
GGTGAACCGGTACGATTCAGGAGATTATCTTAGGTTGATATCAACTTAGA
GGTGATGTAGCTGTTTTCTCCCTGGCTTCGAAGGCGTACTGGACAGTTCG
GAGATTGACGTGGAAAAGCGAGTGGGTGTTGCTCAAGGCCGTACGGCCTC
CCTTCCGTACAGGATTTCTCCGTCACCCTGAGTCATTTGCCCCTTCCCGC
CCTACCCCCCGGTGCTTCTCCCGCATCAAACTCTGCCGTGACAAGGAAAG
AGGCGACGCGGACGGGAGCGTCACAGACACACAGGCCTCTGCTGCGGCGG
TATCGGCCGCAGCGCGCTTGGGCTTAGGTGGAGTGGGCCCAGACACGGAT
CCGGAATCCGCGTCAGCAGCGCAAGCTCAAGAGACGCCAGCGGGGCCTGT
TGAACCCCCCGGGGAGGAGTCGTTACCCGTGACAAAGTCGGACTCGATTT
TCCCCAGAGGAACGCCGACGCCAGTGGTGGTCAAGCTACCTGAGGACGAT
GGCGGCGGATCGGGGTCCTTCCTGCTGGAGGATGAGCTGGTTTTCTCCGA
AGTGCACACTTTCTCCAAGCACGTGAGTTTGCGTCCTCTTTCGTCTCGTA
GCACTAGTCTATGTGCTAGCTTGAACGATGATAGTACTCAAGGTCTTCTC
CAGGAGCCGTATCGGGGTGGAAGCTGTGTACTGGGCCTTTCGGACGAGAG
AAACAACGCAGGGCTTCTGGGTGGCACAAACCCTTCCTCGCACTACTGTA
GTAGCACTCGTTGGCTTCTTGAGCGGCCTTGGCGGATGTTTGGGTTTGTT
CAGAGGAGTGGCAGGCGCAAGCTAAAATGAATCATCAGCTCGACAATTTC
TCCGTCATGTAATATCTTGCCTCTAAGTACATCATATCTCGGCAGGTCAT
ATGATGTGGAATACCGCCCTCGAATTTTGTACGCCCAACGGTATACCGTA
GTCGCGACAGTTAAGCGTTCATTTCATTTTCACCATCTTCGAACGAAACG
TCTCCTTGTCTCCACTGTTTCGGATGCCCTATGGTGGCTGTTTTTTATCA
GGTCTCGTACAAGGATTTCAAGCGTGTCGAGAACGAGGTGTCCGAAGGGC
TCAAAGATGGGCATGAAAGGATTGCAAACGCCGAGAAAGCCCAGCGAAGA
GCGCACGGCTCTCTGGAGAACCCCTATCACAGAACATCGGCC back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig8274:372..6413- >mRNA_E_fasciculatus_S2_contig8274.16423.1 ID=mRNA_E_fasciculatus_S2_contig8274.16423.1|Name=mRNA_E_fasciculatus_S2_contig8274.16423.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1539bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8274:372..6413- (Ectocarpus fasciculatus EfasUO2) GAAGGAGAGCAGCGCGGAGCGGTAGATGTAGCGCAAGCCACCGCCACACA ACCAGCACACACACCAGGAGCGGCAGCAGGACCTGCAGACGAAACAGCAT CGCCGTTACCACGAGAAGGCAGCAACTCCACGTCCCCGAAGACCTCGGAG ATGGATTCTACGCCGCCGGAAGGAGCGATTGCGGAACAATCGCACGAGAA GACGTCAGAAACCGAGACGGGGCAGTCAGACAAGACCAGCGATGCCAATC GCGAGATCAGGAGAAGAAAAACGATGGAGCTCATGAGCCAAGGCGGACTG CACCTCAAGGATATCCTCGCAGACCCGAGCAACGACAGCACTCCGGTGGA GGCGATGAGATCCATTATGGTCCGCGGGAAGGAGCACGGCTGGACAACGT CTCAGCTCTTCGGCGTCTTTCTCGAGACTGGTAGCACGGAAGAGAAGATC CCGTTCGACCACTTTCAGAGGGGGCTTCGCATACTGGGGCTGACCATCCC CGAGGAAGACGAGCGGGAAATATTCAAGACTTTCGATACGGATGGCAGCG GTACGATAGAGCTGAGCGAGTTTATCCGCTGGTGCCTCGACATCGACACG ATGGCCTGGAAGGCCGAACGTGTCCGAAGGACGACGGGGGGGCAGACCAG TGGCGACGGGGAAATCGGCATCGATGAGGCAGCAGCTAGGATGGCCGGTG AGGTAGCACAGGCACAGCTGCCTACGGAGCAGCCCCGATACCCCCTGGGA AACCTAATCTACGAGGGATCCAAGCTATTCTGGAGGACCGGAGAGAGTCT ACGAATCGCCATGCACGAGAACAAGGAGAAGCATTGCGTAGCGATCTCCA CGATGCTTGAGGGGGAGTCAGACCCCTTCCCGGTGCTGAAGGTGGACTCT AGGCTGATTCGTGTCAATGGAAAGGATGCGGTGCTCGAGAGGATTGCCGA GATGACGGAAGCGGACAAAGGCGAAATTCAAAGCTTGCCAGAGGACGCCA GGGCAAAGCTTTTCGACAAAGCCAGGGCTTCCGTTCTCTCGGACTACCTG CTGGCCAGACTCAAGCTGATCGATGGAGGCGACGCGGACGGGAGCGTCAC AGACACACAGGCCTCTGCTGCGGCGGTATCGGCCGCAGCGCGCTTGGGCT TAGGTGGAGTGGGCCCAGACACGGATCCGGAATCCGCGTCAGCAGCGCAA GCTCAAGAGACGCCAGCGGGGCCTGTTGAACCCCCCGGGGAGGAGTCGTT ACCCGTGACAAAGTCGGACTCGATTTTCCCCAGAGGAACGCCGACGCCAG TGGTGGTCAAGCTACCTGAGGACGATGGCGGCGGATCGGGGTCCTTCCTG CTGGAGGATGAGCTGGTTTTCTCCGAAGTGCACACTTTCTCCAAGCACGT CTCGTACAAGGATTTCAAGCGTGTCGAGAACGAGGTGTCCGAAGGGCTCA AAGATGGGCATGAAAGGATTGCAAACGCCGAGAAAGCCCAGCGAAGAGCG CACGGCTCTCTGGAGAACCCCTATCACAGAACATCGGCC back to top
|