prot_E_fasciculatus_S2_contig8261.16409.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8261.16409.1
Unique Name	prot_E_fasciculatus_S2_contig8261.16409.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	190

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot
Match: D7FT02_ECTSI (Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT02_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 1.340e-116
Identity = 181/189 (95.77%), Postives = 189/189 (100.00%), Query Frame = 0

Query:    1 MPLDINMFRREPDLIRESQRRRFEPVEIVDEVIDLDTKWRESRSRIDFLNKDKNRFQKEVTKAKKAGGEDPENAAKIKEVAKEVKVVEAKMVELSQKVSKLLPKIGNIVADDVPVSDDEDKDNKVVSTFGPTPTGEKFMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR 189
            MPLDINMFRREPDLIRESQRRRF+PVEIVDEVIDLDTKWRESRSRIDFLNKD+NR+QKEVTKAKKAGGEDPENAAKIKEVAKEVK+VEAKMVELSQ+VSKLLPKIGNIVADDVPVS+DE+KDNKVVSTFGPTPTGEK+MHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR
Sbjct:    1 MPLDINMFRREPDLIRESQRRRFQPVEIVDEVIDLDTKWRESRSRIDFLNKDRNRYQKEVTKAKKAGGEDPENAAKIKEVAKEVKIVEAKMVELSQQVSKLLPKIGNIVADDVPVSNDEEKDNKVVSTFGPTPTGEKYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR 189

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BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot
Match: A0A836CAY7_9STRA (Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY7_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.590e-65
Identity = 114/193 (59.07%), Postives = 148/193 (76.68%), Query Frame = 0

Query:    1 MPLDINMFRRE----PDLIRESQRRRFEPVEIVDEVIDLDTKWRESRSRIDFLNKDKNRFQKEVTKAKKAGGEDPENAAKIKEVAKEVKVVEAKMVELSQKVSKLLPKIGNIVADDVPVSDDEDKDNKVVSTFGPTPTGEKFMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR 189
            MP+DI  FR +    P+L+RESQRRRF  V +VDE+I +D+ WR  R ++D L K++NR QK+V  ++K G  D E  A+IK + +E+K  EA++  L ++ ++LLPKIGNIVA DVP S+DE+KDN+V    GP PTGE++ HHHEVL+RIGGYEPERGV VAGHRAYFLRDAGLLLNQALI +G+AFL +R
Sbjct:    1 MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQR 193

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BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot
Match: A0A4D9CLN9_9STRA (Serine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLN9_9STRA)

HSP 1 Score: 187 bits (476), Expect = 2.470e-52
Identity = 104/193 (53.89%), Postives = 133/193 (68.91%), Query Frame = 0

Query:    1 MPLDINMFR----REPDLIRESQRRRFEPVEIVDEVIDLDTKWRESRSRIDFLNKDKNRFQKEVTKAKKAGGEDPENAAKIKEVAKEVKVVEAKMVELSQKVSKLLPKIGNIVADDVPVSDDEDKDNKVVSTFGPTPTGEKFMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR 189
            MP+DIN+ R     +P L+RESQRRRF  VE+VDEV+  D  WR+  +  D   K +N  Q EV+K  KA  E  +  AKI+E  K+V  ++  +    ++V KLLPKIGNIV D VPVS DE+ D +VV T+G   TG+  +HHH++L RIGG+EPERG  VAGHR YFLRDAGLLLN AL+NYG++FLR R
Sbjct:    1 MPIDINLLRVDRGGDPALVRESQRRRFASVELVDEVLARDASWRKLVNDSDATRKARNAVQAEVSKKMKAKEECRDLVAKIQEFDKQVLEMDRAVKAAKEEVDKLLPKIGNIVDDSVPVSQDEEADTEVVRTWGTPVTGDDLLHHHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALVNYGVSFLRAR 193

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BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot
Match: A0A7S3MDB3_9STRA (Serine--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDB3_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.490e-51
Identity = 106/193 (54.92%), Postives = 127/193 (65.80%), Query Frame = 0

Query:    1 MPLDINMFRRE----PDLIRESQRRRFEPVEIVDEVIDLDTKWRESRSRIDFLNKDKNRFQKEVTKAKKAGGEDPENAAKIKEVAKEVKVVEAKMVELSQKVSKLLPKIGNIVADDVPVSDDEDKDNKVVSTFGPTPTGEKFMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR 189
            MPLDIN+FR      P+LIRESQRRRF  VE+VDEVI  D KWR     ID L K +N  QKEV    KA        A+IK + +E+   EA+   L  +V +L+  IGN+V   VPVS DEDKDN VV  +G        ++HH++L RIGGYEPERG  +AGHR YFL+DAG+LLNQA INYGIAFLRKR
Sbjct:    1 MPLDINLFRANAGGNPELIRESQRRRFASVEVVDEVIAKDEKWRILTGTIDDLRKKRNAVQKEVAVKMKAKEAADAQVAEIKAIGEEILAAEAEQKALKIEVDRLVGTIGNLVESGVPVSQDEDKDNLVVRKWGVPRDPAGMLNHHDLLWRIGGYEPERGAQIAGHRGYFLKDAGVLLNQAFINYGIAFLRKR 193

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BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot
Match: F0Y3J7_AURAN (Serine--tRNA ligase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3J7_AURAN)

HSP 1 Score: 172 bits (437), Expect = 1.230e-48
Identity = 103/195 (52.82%), Postives = 134/195 (68.72%), Query Frame = 0

Query:    1 MPLDINMFRR----EPDLIRESQRRRFEPVEIVDEVIDLDTKWRESRSRIDFLNKDKNRFQKEVTKAKKAGGEDP-ENAAKIKEVAKEVKVVEAKMVELSQKVSKLLPKIGNIVADDVPVSDDEDKDNKVVSTFGP-TPTGEKFMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR 189
            MPLDI++ R     +P+ +RESQRRRF  V +VD+VI  D  WR+    +D +  +KN+ QKE+T  KKA  + P +  A +K +  +   VEA++   +QKV KL   IGN+VADDV VS DE+KDN+VVS +G   PT      HHE+L+ IGGYEPERGV VAGHRAYF  D G++LNQA+INYGI+FLRKR
Sbjct:    1 MPLDISILRAYRGGDPEKVRESQRRRFADVGLVDKVIAEDEAWRKLTQDVDDIKAEKNKKQKEITTLKKAKADVPAQMLADLKALDAKRAAVEARVEPQAQKVKKLFSGIGNLVADDVVVSQDEEKDNEVVSRWGECAPTA--AHSHHELLYMIGGYEPERGVRVAGHRAYFFTDVGVMLNQAVINYGISFLRKR 193

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BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot
Match: A0A7S3ZR42_9STRA (Serine--tRNA ligase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR42_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.160e-47
Identity = 105/194 (54.12%), Postives = 129/194 (66.49%), Query Frame = 0

Query:    1 MPLDINMFRR----EPDLIRESQRRRFEPVEIVDEVIDLDTKWRESRSRIDFLNKDKNRFQKEVTKAKKAGGE-DPENAAKIKEVAKEVKVVEAKMVELSQKVSKLLPKIGNIVADDVPVSDDEDKDNKVVSTFGPTPTGEKFMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR 189
            MPLDIN  R     +P+ +RESQRRRF  V +VD+VI  D +WR   +  D    +KN  QKE+T  KKA  E DP+    +K +  +VK  EA      QKV KL   IGN+V D VPVS+DEDKDN+VV+ +G      K+ HH E+L+ IGGYEPERGV VAGHRAYF  D G+LLNQA+INYGIAFLRK+
Sbjct:   60 MPLDINTIRAYKGGDPEKVRESQRRRFADVALVDKVIAEDEEWRRLVALADDKRGEKNAKQKEITALKKAKKEVDPQMLKDLKALDAKVKEAEAATEPQLQKVLKLFNTIGNLVEDSVPVSNDEDKDNEVVNKWGTCKQDAKYSHH-ELLYMIGGYEPERGVRVAGHRAYFFTDYGVLLNQAVINYGIAFLRKK 252

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BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot
Match: A0A7S3Y3E5_HETAK (Serine--tRNA ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3E5_HETAK)

HSP 1 Score: 169 bits (428), Expect = 8.370e-47
Identity = 100/194 (51.55%), Postives = 129/194 (66.49%), Query Frame = 0

Query:    1 MPLDINMFR----REPDLIRESQRRRFEPVEIVDEVIDLDTKWRESRSRIDFLNKDKNRFQKEVTKAKKAGGEDPENAAKIKE-VAKEVKVVEAKMVELSQKVSKLLPKIGNIVADDVPVSDDEDKDNKVVSTFGPTPTGEKFMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR 189
            M +DIN  R     +P+ ++E QR+RF  VEIVDE ++ D  WR   S ID L K+KN  QKE+ K  KA  + P    + K  V  E+   EA+ ++L   V KLL +IGN+V DDVPVS DE  +N  V T GPTP+G ++ +HH +LH+IGGYEPERG  VAG+R YFLRDAG+ LNQALINYG+ F R+R
Sbjct:    1 MGIDINNLRVDRGGDPEKVKEWQRKRFAKVEIVDECVEKDNLWRTVVSTIDNLKKEKNAVQKEIGKHMKAKEQPPPELLERKAAVEAEILQKEAEKIDLEAVVQKLLNQIGNMVDDDVPVSQDE-AENGTVRTHGPTPSGPQYNNHHNLLHKIGGYEPERGSKVAGNRCYFLRDAGVRLNQALINYGMDFCRER 193

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BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot
Match: A0A7S2V1X7_9STRA (Serine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1X7_9STRA)

HSP 1 Score: 161 bits (408), Expect = 4.090e-44
Identity = 92/180 (51.11%), Postives = 118/180 (65.56%), Query Frame = 0

Query:   11 EPDLIRESQRRRFEPVEIVDEVIDLDTKWRESRSRIDFLNKDKNRFQKEVTKAKKAGGEDPENAAKIKEVAKEVKVVEAKMVELSQKVSKLLPKIGNIVADDVPVSDDEDKDNKVVSTFGPTPTGEKF-MHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR 189
            +P+ ++E QR+R+  VE+VDEV++ D  WR+    +D L K +N  QKEV K KKA     +  A+IK   +E+K                    GN+V + VPVS DE++ N  V T GPTP+ +K+ +HHHE L RIGGYEPERGVGVAGHRAYFLRDAG+LLNQALINYG+ FLR R
Sbjct:    9 DPEKVKEFQRKRYAKVEVVDEVVEKDQAWRDLVKTVDELGKRRNAVQKEVGKKKKAKEPCDDLVAQIKGFDEEIKXXXXXXXXXXXXXXXXXXXXGNMVDESVPVSQDEEE-NITVCTVGPTPSNDKYPLHHHEALWRIGGYEPERGVGVAGHRAYFLRDAGVLLNQALINYGMQFLRAR 187

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BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot
Match: A0A7R9U3G3_9STRA (Serine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3G3_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.370e-43
Identity = 97/201 (48.26%), Postives = 128/201 (63.68%), Query Frame = 0

Query:    1 MPLDINMFRRE-----PDLIRESQRRRFEPVEIVDEVIDLDTKWRESRSRIDFLNKDKNRFQKEVTKAKKAGGEDPENAAKIKE-VAKEVKVVEAKMVELSQKVSKLLPKIGNIVADDVPVSDDEDKDNKVVSTFGPTPTGE------KFMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR 189
            MPLDIN+FR +     PD IRESQRRR+   E+VD+VI+ D  WR ++  +D   KDK   QKE+TK  KA  +  E     KE + ++V  +E  +  L++   KLL ++GNIVA+DVP S+DED DN     + P P G+      K + HH++L+ IGGYEP RG  VAGH+ YFL DAG+LLNQA+INY IA  R R
Sbjct:    1 MPLDINLFRADRPGGDPDKIRESQRRRYASEELVDQVIEADNAWRAAQGAVDSRRKDKGDLQKELTKIYKAKQKPSEEMMAQKEAIDRDVAELEKAVAPLAEVRDKLLAQVGNIVAEDVPTSNDEDADNDAFIHW-PAPPGQGWTPPSKPIPHHQLLYMIGGYEPSRGAKVAGHKGYFLSDAGVLLNQAIINYAIALARAR 200

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BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot
Match: A0A7S3LP31_9STRA (Serine--tRNA ligase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LP31_9STRA)

HSP 1 Score: 158 bits (399), Expect = 5.630e-43
Identity = 85/189 (44.97%), Postives = 123/189 (65.08%), Query Frame = 0

Query:    1 MPLDINMFRREPDLIRESQRRRFEPVEIVDEVIDLDTKWRESRSRIDFLNKDKNRFQKEVTKAKKAGGEDPENAAKIKEVAKEVKVVEAKMVELSQKVSKLLPKIGNIVADDVPVSDDEDKDNKVVSTFGPTPTGEKFMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR 189
            MP+DI++ +  PD++RES+++R+    +VD V+     W E + ++D + K+KN   KE+ K KKA        AK K + + +KV+EA +      +     KIGNIV + VPVSDDE  +N+V+ST+G    G+++  HH++L RI GYEPERGV VAGHR YFL+  G++LNQALINY + FL KR
Sbjct:    1 MPIDISILKDTPDVVRESEQKRYGEAGLVDRVVAKYAFWVEQKGKLDSMRKEKNDINKEIGKKKKAKENADAEVAKSKAMTEAIKVIEAVVATAEVDMKNEFNKIGNIVHESVPVSDDE-ANNEVISTWGEFKEGDQYQSHHQLLWRIDGYEPERGVKVAGHRGYFLKGPGVMLNQALINYALQFLIKR 188

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8261.16409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FT02_ECTSI	1.340e-116	95.77	Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ...	[more]
A0A836CAY7_9STRA	2.590e-65	59.07	Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=...	[more]
A0A4D9CLN9_9STRA	2.470e-52	53.89	Serine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=...	[more]
A0A7S3MDB3_9STRA	1.490e-51	54.92	Serine--tRNA ligase n=1 Tax=Spumella elongata TaxI...	[more]
F0Y3J7_AURAN	1.230e-48	52.82	Serine--tRNA ligase (Fragment) n=1 Tax=Aureococcus...	[more]
A0A7S3ZR42_9STRA	2.160e-47	54.12	Serine--tRNA ligase n=2 Tax=Pelagomonas calceolata...	[more]
A0A7S3Y3E5_HETAK	8.370e-47	51.55	Serine--tRNA ligase (Fragment) n=1 Tax=Heterosigma...	[more]
A0A7S2V1X7_9STRA	4.090e-44	51.11	Serine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa ...	[more]
A0A7R9U3G3_9STRA	2.370e-43	48.26	Serine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoid...	[more]
A0A7S3LP31_9STRA	5.630e-43	44.97	Serine--tRNA ligase n=1 Tax=Aplanochytrium stocchi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 46..66
None	No IPR available	COILS	Coil	Coil	coord: 77..97
None	No IPR available	GENE3D	3.30.930.10		coord: 107..189 e-value: 6.5E-19 score: 70.0
None	No IPR available	PANTHER	PTHR11778:SF7	SERINE--TRNA LIGASE, CYTOPLASMIC	coord: 1..189
IPR042103	Serine-tRNA synthetase, type1, N-terminal domain superfamily	GENE3D	1.10.287.40		coord: 2..106 e-value: 9.7E-27 score: 95.4
IPR015866	Serine-tRNA synthetase, type1, N-terminal	PFAM	PF02403	Seryl_tRNA_N	coord: 3..109 e-value: 7.4E-25 score: 87.3
IPR002317	Serine-tRNA ligase, type1	PANTHER	PTHR11778	SERYL-TRNA SYNTHETASE	coord: 1..189
IPR010978	Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm	SUPERFAMILY	46589	tRNA-binding arm	coord: 3..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8261	contig	E_fasciculatus_S2_contig8261:247..4165 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8261.16409.1	mRNA_E_fasciculatus_S2_contig8261.16409.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8261 247..4165 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8261.16409.1 ID=prot_E_fasciculatus_S2_contig8261.16409.1|Name=mRNA_E_fasciculatus_S2_contig8261.16409.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=190bp
MPLDINMFRREPDLIRESQRRRFEPVEIVDEVIDLDTKWRESRSRIDFLN
KDKNRFQKEVTKAKKAGGEDPENAAKIKEVAKEVKVVEAKMVELSQKVSK
LLPKIGNIVADDVPVSDDEDKDNKVVSTFGPTPTGEKFMHHHEVLHRIGG
YEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010978	tRNA-bd_arm
IPR002317	Ser-tRNA-ligase_type_1
IPR015866	Ser-tRNA-synth_1_N
IPR042103	SerRS_1_N_sf