prot_E_fasciculatus_S2_contig826.16408.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig826.16408.1
Unique Nameprot_E_fasciculatus_S2_contig826.16408.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length155
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig826.16408.1 vs. uniprot
Match: D8LRB1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRB1_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 4.360e-29
Identity = 77/166 (46.39%), Postives = 104/166 (62.65%), Query Frame = 0 
Query:    1 MLFKRQAIFTDNVGALGGCALAYRG----DEGAN----KITFEDKASFRDNYC--DGEHPAIVEYLDENNIDRNDENKGGGALLAFGPTTVEFQSTAVFKRNLSPSGGAILTGTDATVSFVSDDELITEDNVASATCPDILVNEGSVVQIDGETSSG--EDLCQRS 154
            +LF   AIF+DNVG   G ALA +G    D+ A+    K+TFEDKA F+DNY        +  EY+        DE+KGGGAL A G T+V+FQ+TAVFKRN +  GGAIL     ++SF+S+ +L+T DNVAS+ C DIL ++  V+ I   T SG  + LC+R+
Sbjct:  680 VLFSGLAIFSDNVGGTAGAALASKGSDPDDDDASDVDSKVTFEDKAKFKDNYIIPPRRPTSSSEYV-------VDEDKGGGALAALGVTSVDFQNTAVFKRNEAVKGGAILNS--GSISFLSEAKLVTADNVASSACADILNDDSGVINIGTTTLSGGSDSLCERT 836
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig826.16408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRB1_ECTSI4.360e-2946.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 86..108
e-value: 0.0025
score: 15.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig826contigE_fasciculatus_S2_contig826:22153..24541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig826.16408.1mRNA_E_fasciculatus_S2_contig826.16408.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig826 21639..24575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig826.16408.1 ID=prot_E_fasciculatus_S2_contig826.16408.1|Name=mRNA_E_fasciculatus_S2_contig826.16408.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=155bp
MLFKRQAIFTDNVGALGGCALAYRGDEGANKITFEDKASFRDNYCDGEHP
AIVEYLDENNIDRNDENKGGGALLAFGPTTVEFQSTAVFKRNLSPSGGAI
LTGTDATVSFVSDDELITEDNVASATCPDILVNEGSVVQIDGETSSGEDL
CQRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat