mRNA_E_fasciculatus_S2_contig8255.16405.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8255.16405.1
Unique NamemRNA_E_fasciculatus_S2_contig8255.16405.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8255.16405.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP62_9PHAE)

HSP 1 Score: 811 bits (2094), Expect = 2.960e-292
Identity = 432/458 (94.32%), Postives = 436/458 (95.20%), Query Frame = 2
Query:   65 MISSLSWVPRGASKSKPLRYEVSQRELEEMMREQGIEEDEEVADDNDILGDGAEGVAGXXXXXXXXX-ELPPELRMDDYDNEPGLTVSGPRDGGEGGDNGSXXXXXXXXD-LDAMEEXXXXXXXXXX-GEGEAMGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKPGKKPRKRQTVPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVTKHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQV 1429
            MISSLSWVPRGASKSKPLRYEVSQRELEEMMREQ I  DEEV DDNDILGDGAEGVAG          ELPPELRMDDYDNEPGLT+SGPRDG EGGD   XXXXXXXX  LDAMEEXXXXXXXXXX GEG+AMGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKPGKKPRKRQT+PGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVT+H IQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQV
Sbjct:    1 MISSLSWVPRGASKSKPLRYEVSQRELEEMMREQRIAVDEEVTDDNDILGDGAEGVAGGAAARGDGDDELPPELRMDDYDNEPGLTLSGPRDGREGGDGXXXXXXXXXXXXLDAMEEXXXXXXXXXXXGEGDAMGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKPGKKPRKRQTIPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVTRHKIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQV 458          
BLAST of mRNA_E_fasciculatus_S2_contig8255.16405.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS73_ECTSI)

HSP 1 Score: 667 bits (1720), Expect = 1.920e-237
Identity = 323/325 (99.38%), Postives = 325/325 (100.00%), Query Frame = 2
Query:  455 MGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKPGKKPRKRQTVPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVTKHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQV 1429
            MGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKPGKKPRKRQT+PGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVT+HTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQV
Sbjct:    1 MGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKPGKKPRKRQTIPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVTRHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQV 325          
BLAST of mRNA_E_fasciculatus_S2_contig8255.16405.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LXX8_9STRA)

HSP 1 Score: 301 bits (771), Expect = 1.490e-92
Identity = 200/475 (42.11%), Postives = 269/475 (56.63%), Query Frame = 2
Query:   65 MISSLSWVPRGASKSKPLRYEVSQRELEEMMREQGIEEDEEVADDNDILGDGAEGVAGXXXXXXXXXEL--------PPELRMDDYDNEPGLTVSGPRDGGEGGDNGSXXXXXXXXDLDAMEEXXXXXXXXXXGEGEAMGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPP-RTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKPGKKPRKRQT--VPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVTKHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVR--------------RPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAE 1414
            MI+SL+W+P+GA++++P+R+E+S  E   + +E   +E E++ + ND   +GAE    XXXXXXXXX          PPELRM++YD+E    V G                    + D ++E                 ++++E+ +    +A E E +  D EDN IK  D +L+ A TE DE S LEVQ++SEE GNL+VHHDI LP  PL LAWMD PP +T+  S+ S        VG+Y AVGTF P IEIWNLDVLDPLEPTA LGG   +  K  KK + + +  +PGSH  AV+ LSWN  +R  LASGS D TVK+WDVTTQ CS T THH+DKVQ V                     +DAR  T  +  ++ AD E L W+P NP  +    EDG + C DVR              + ++  ++F AHE+  S +SF+  +PGM+AT S DKTVKVWDV+A+
Sbjct:    1 MITSLTWIPKGAARTRPVRFELSASEFARV-KEMAKDEQEQI-ESNDAAREGAEXXXXXXXXXXXXXXXXXXXXXXXPPELRMNEYDDEDDNEVHG-----------------FTNNHDVIDEVEDD-------------IAVMEQGNV--AYADEDEWDAEDLEDNEIKASDALLVVAMTE-DEFSHLEVQLFSEE-GNLFVHHDITLPDFPLSLAWMDCPPFQTSDGSQSS--------VGNYIAVGTFSPAIEIWNLDVLDPLEPTAILGGENPELNKKSKKNKNKVSAFLPGSHEAAVMGLSWNSTYRQALASGSADTTVKIWDVTTQACSHTFTHHTDKVQSVXXXXXXXXXXXXXXXXXXXXXIDARTATTTSACSLTADIESLTWDPFNPFHLYCALEDGAIVCIDVRNCANNAGSTDKLKGKNKAINFTFQAHEQTTSGISFSSRIPGMMATASIDKTVKVWDVNAK 431          
BLAST of mRNA_E_fasciculatus_S2_contig8255.16405.1 vs.
Match: Periodic (tryptophan protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDW4_9STRA)

HSP 1 Score: 293 bits (749), Expect = 6.820e-90
Identity = 191/453 (42.16%), Postives = 252/453 (55.63%), Query Frame = 2
Query:   65 MISSLSWVPRGASKSKPLRYEVSQRELEEMMREQGIEEDEEVADDNDILGDGAEGVAGXXXXXXXXXELPPELRMDDYDN-EPGLTVSGPRDGGEGGDNGSXXXXXXXXDLDAMEEXXXXXXXXXXGEGEAMGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKPG----KKPRKRQTVPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVTKHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPES-PVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDV 1405
            MIS+L+WVP+GASK  P +++++  E+  MM++  +E   E A+D D+                   +LP   RM+ YD  E  + +             +        D +  +E XXXXXXXXX       + L EE                D ED  I+P D V+L A+TE+D  S LEVQ+Y EETG+LYVHH+I LP  PLCL+WMD+ P  A  ++ S S       GS+ AVGTF+PGIEIWNLDVL+ LEP+A LGG +E   K G    KK R+ +  PGSHTDAV++L WN  HR++L SGS D+TVKVWD+TTQ C  T+ HH +KVQ V                  L +LD R P   +  ++ AD E + W P+ P  ++  +EDGVV C DVR   S P+  F AH   VSAVSF   +PGM AT   DKTVK+WD+
Sbjct:    1 MISALAWVPKGASKRIPDKHKLTDEEIA-MMQDTAMENSVEKANDEDL----------EDIPEEETSDLPASFRMERYDEVEDDIAIK------------NYIGGTLEDDEEVSDEEXXXXXXXXXXXXXVSRLKLEEEVEKDLEL---------DQEDLEIRPNDIVILVANTEDD-FSNLEVQIYDEETGSLYVHHEINLPDFPLCLSWMDVAPMAADPAKGSES-------GSFVAVGTFKPGIEIWNLDVLNVLEPSAILGGEEESMLKNGAPKAKKDRQIRLRPGSHTDAVMSLDWNHTHRNMLVSGSADHTVKVWDITTQNCLHTMHHHKNKVQCVXXXXXXXXXXXXXXXXXRLLVLDGRHPDAFSSFSLSADVESIAWAPYQPNNVVAATEDGVVVCYDVRMNASEPLIRFQAHAGSVSAVSFAAQIPGMFATAGIDKTVKIWDM 413          
BLAST of mRNA_E_fasciculatus_S2_contig8255.16405.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNX1_9STRA)

HSP 1 Score: 289 bits (740), Expect = 1.410e-88
Identity = 193/460 (41.96%), Postives = 253/460 (55.00%), Query Frame = 2
Query:   65 MISSLSWVPRGASKSKPLRYEVSQRELEEMMR-EQGIEEDEEVADDNDILGDGAEGVAGXXXXXXXXXELPPELRMDDYDNEPGLTVSGPRDGGEGGDNGSXXXXXXXXDLDAMEEXXXXXXXXXXGEGEAMGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGG-----FKEKD-KKPGKKPRKRQTVPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVTKHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPES-PVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVP 1420
            MIS+L+WVPRGASK  P ++ +S+ E+E M +  Q +EED E  +++    DGA+    XXXXXXXXXE   E  MD YD E                             DA  +          G G  + V   EE     +       +D+D  D  I+P D V+L  +TEED  S LEV VY E++GNLYVHH+I LP+ PL LAWMD+ P    +  V+G+       GS+ AVGTF+ GIEIWNLDVLD LEPTATLGG     F++    K  +K  K    PGSH D+VL L WN  HR++LAS S D TVK+WDVTTQQC  T+THH                         L +LD RAP   +K  + AD E ++W+PH+P+ ++  +EDG+V   DVR+  S P+Y F AH+  VSA+SF+  +PG+ AT   DK VK+WD+    P
Sbjct:    1 MISALAWVPRGASKRVPEKFVLSKEEVEMMSQLAQEVEEDNEEVEEDXPEEDGADXXXXXXXXXXXXXEALKEFNMDQYDEEX---------------------------XDAAVKDYLQ------GNGAEIPVDDDEEDIPDDL-------DDADKADMEIRPTDSVVLVCNTEED-FSNLEVHVYEEDSGNLYVHHEINLPAFPLALAWMDIAP----VPPVNGAPVN----GSFVAVGTFKAGIEIWNLDVLDVLEPTATLGGEVNATFRDVAISKAMRKKHKAALKPGSHQDSVLGLDWNAGHRNMLASASADATVKIWDVTTQQCMHTMTHHXXXXXXXXXXXXXXXXXXXXXXXXSLVVLDGRAPHAYSKFALSADVESMVWHPHSPSTLVASTEDGIVVAYDVRKGNSAPLYRFQAHDTAVSAISFSQAIPGLFATAGTDKHVKIWDLAGPTP 411          
BLAST of mRNA_E_fasciculatus_S2_contig8255.16405.1 vs.
Match: WD40 (repeat-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XM95_9FUNG)

HSP 1 Score: 288 bits (737), Expect = 2.750e-88
Identity = 148/305 (48.52%), Postives = 195/305 (63.93%), Query Frame = 2
Query:  518 EDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKPGKKPRKRQTVPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVTKHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPE-SPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQV 1429
            EDS+ E+  I P D++LL A TE+D  S +E+ VY E   NLYVHHDI LPS PLCL W+D         +V   A EG   G++ AVGTF+P IEIW+LD +D + P   LG   +K K+ GKK +K    P  HTDAV++LSWN+ HR++LAS S D TVK+WD+ T  C  +  HH DKVQ V WHPVE+TVM T GYD+V+A  D+R+P  ++  TI++D EC+ W+P  P Q    +E G V C DVR P  S +++  AH+  VSA+   P++PG+L T S DK VKVWD+    P  V
Sbjct:  119 EDSEKEELQILPTDNLLLAAKTEDDI-SHMEIYVYEENEDNLYVHHDIMLPSFPLCLEWLDF--------KVGKQAGEGS--GNFVAVGTFDPDIEIWDLDTVDSMYPDLILGNPDKKAKR-GKKAKK--VNPNYHTDAVMSLSWNKNHRNLLASSSADTTVKIWDLATASCVRSFDHHKDKVQTVMWHPVESTVMLTGGYDKVIAAFDSRSPESISTWTIESDVECIRWDPFQPQQFYVSTESGTVQCFDVRNPNTSALFTLHAHDSPVSAMDVNPVIPGLLVTGSTDKVVKVWDIKENKPSMV 409          
BLAST of mRNA_E_fasciculatus_S2_contig8255.16405.1 vs.
Match: WD40-repeat-containing (domain protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XMS4_9FUNG)

HSP 1 Score: 282 bits (722), Expect = 3.180e-86
Identity = 190/465 (40.86%), Postives = 252/465 (54.19%), Query Frame = 2
Query:   65 MISSLSWVPRGASKSKPLRYEVSQRELE---EMMREQGIEEDEEVADDNDILGDGAEGVAGXXXXXXXXXELPPELRMDDYDNEPGLTVSGPRDGGEGGDNGSXXXXXXXXDLDAMEEXXXXXXXXXXGEG---EAMGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKPGKKPRKRQTVPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDK-----VQGVAWHPVEATVMATVGYDRVLALLDARAPTKVTKHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPES--PVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVP 1420
            MIS+L+WV +GA+K  P +YE+++ E +   EM  E+    DE V  D ++  D   G A           + PEL   +YD E                           D  A  E XXXXXXXX G     +  G+S                  DSD ED  ++  D++L+ A TE+D  S LEV V+ E   NLYVHHD+ LPS PLCL W+D         R    A EG   G+Y AVGTFEP IEIW+LD +D + P A LG   +KDKK  KK  K       HTDAV++L+WN+ HR++LAS S D TVK+WD+ T +C+ +  HH+DK     VQ V WHPVEATVMAT  YD+ +   D+RAP  +T+ ++ AD E L+W+ H P Q    +E+G V C DVR+  S  PV++  AH+   S+V   P +PG L T S DKTVK+WD+ +  P
Sbjct:    1 MISALAWVRKGAAKELPDKYELTEEEFQRVSEMANERIRAPDEGV--DAEMAIDDEAGTAKNGNAAAPEAAIDPELA--EYDLE-------------------------HYDDPAPGEEXXXXXXXXGGMSLFSKIKGLSYHASNEDDPYIVMNENDADSDVEDVHVRANDNMLVAAKTEDDI-SHLEVYVFEEAEDNLYVHHDVMLPSFPLCLEWLDF--------RAGRRAQEGGQ-GNYIAVGTFEPEIEIWDLDTMDAMYPDAILGAEAKKDKKAKKKRGK------FHTDAVMSLAWNKTHRNILASASADTTVKLWDLNTLKCAHSFEHHTDKASDNEVQVVTWHPVEATVMATGSYDQTVTAFDSRAPGNLTRWSVPADVESLVWDVHAPQQFYVSAENGAVYCFDVRQGSSSTPVFTLQAHDDACSSVDIHPTIPGCLVTSSVDKTVKIWDLHSGKP 420          
BLAST of mRNA_E_fasciculatus_S2_contig8255.16405.1 vs.
Match: WD40-repeat-containing (domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB86_9STRA)

HSP 1 Score: 280 bits (715), Expect = 1.840e-85
Identity = 156/347 (44.96%), Postives = 199/347 (57.35%), Query Frame = 2
Query:  440 GEGEAMGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKPGKK------------PRKRQTVPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVTKHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPESP-VYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQVRVLL 1441
            G     G+S +E P      + + +G+D+  ED++I+P D VLL A+TEEDEH+ L V VY    G+LYVHHD+ LP+LPLC+AWMD+ PR        GSA     + SY AVGTFEPGIEIWNLDVLDPLEP+A LGG+      PG                    V GSH+DAV+ LSWN  HR VLAS   D  VKVWDVTTQ CSATLTH                                RA        + ADPECL+W+PH+ ++++ G+EDG V C DVR+  +P ++ F AH +GV+ +S +P   G+LAT SEDKTV++WD  A     + VLL
Sbjct:    4 GAAARAGMSFVERPDIADDDSDDGDGDDA--EDHVIQPSDAVLLAAATEEDEHAVLLVHVYDAAAGSLYVHHDVTLPALPLCVAWMDVAPRR----HDGGSAAP---LASYAAVGTFEPGIEIWNLDVLDPLEPSAVLGGWA-----PGTAGGAGXXXXXXXXXXXXXVVEGSHSDAVIGLSWNATHRQVLASAGADEVVKVWDVTTQMCSATLTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAAAAALLPLGADPECLIWDPHDGSRLMAGTEDGAVACWDVRKVGAPPLFRFAAHGEGVAGLSASPHHRGLLATASEDKTVRLWDASAAGGAAMPVLL 336          
BLAST of mRNA_E_fasciculatus_S2_contig8255.16405.1 vs.
Match: Predicted (protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YM77_THAPS)

HSP 1 Score: 269 bits (687), Expect = 1.860e-82
Identity = 154/321 (47.98%), Postives = 193/321 (60.12%), Query Frame = 2
Query:  533 EDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKKP------GKKPRKRQTVPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQ---------QCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAP--------TKVTKHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRR-PESPVYSFTAHEKG-VSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVP 1420
            ED  I+ GD +++ A TEED  ++LE+ ++  ++ NLYVHHDI LPS PLCLA  ++       S    S     T G+YCAVG+FE GIEIWNLDV++ LEPT  LGG   K            +        GSHTDAV+ LSWN  H+ VLASGS D TVK+WDVT           + SATLTHHSDKVQ +AWHP E T++AT GYDR + L+DAR+         + V K  + AD E + W+ HN   +   SEDGVV C DVR+    PV+S  AHE G VS +++ PLVPGML TCS DKTV +WD     P
Sbjct:   20 EDVRIREGDALVVVAKTEED-FASLEINIFDTQSSNLYVHHDIPLPSFPLCLALGNV-----VSSYQPNSNKNSITSGNYCAVGSFETGIEIWNLDVMNALEPTIVLGGMDTKGXXXXXXXXGSTQSNNTGLREGSHTDAVMGLSWNTVHQQVLASGSADGTVKLWDVTHTTRGKGGDYVRPSATLTHHSDKVQSLAWHPSEGTLLATGGYDRKVCLVDARSAAAEATANSSSVKKAKLLADCEAIAWDVHNQQYLTAASEDGVVQCWDVRKFGGEPVWSMIAHEYGGVSDIAYNPLVPGMLITCSIDKTVALWDTQNASP 334          
BLAST of mRNA_E_fasciculatus_S2_contig8255.16405.1 vs.
Match: Uncharacterized (protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G180_9STRA)

HSP 1 Score: 273 bits (699), Expect = 1.910e-82
Identity = 177/455 (38.90%), Postives = 239/455 (52.53%), Query Frame = 2
Query:   65 MISSLSWVPRGASKSKPLRYEVSQRELEEMMREQGIEEDEEVADDNDILGDGAEGVAGXXXXXXXXXELPPELRMDDYDNEPG-LTVSGPRDGGEGGDNGSXXXXXXXXDLDAMEEXXXXXXXXXXGEGEAMGVSLLEEPSTGQVFAYESEGEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIALPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWNLDVLDPLEPTATLGGFKEKDKK------PGKKPRKRQTVPGSHTDAVLALSWNREHRHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATVGYDRVLALLDARAPTKVTKHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPES-PVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDV 1405
            MIS+L+WVP+GAS+  P +++++  EL  MM+E  +E +E+ AD N +L D  E             +LP    M+ YD E   + +             S        D    +E           E +   + L EE         + +  + D ED  I+P D V+L A+TE+D  S LEVQ+Y EE G+LYVHH+I LP  PLCL+WMD  P  A  ++   S       GS+ AVGTF+PGIEIWNLD+LD LEP+A LGG +E  +K        KK R+ +   GSHTDAV++L WN  HR++L SGS D+TVKVWD+ TQ C  T+ H                          L +LD R P   +   + AD E + W P+ P +++  +EDGVV C DVR   S P+  F AH   VSAVSF   +PGM AT   DKTVK+WD+
Sbjct:    1 MISALTWVPKGASRQMPEKHKMTDEELT-MMQEMVMENEEQEAD-NKVLEDIPE---------DEISDLPASFHMETYDEEENDIAIK------------SCIGSSLEEDKQLSDEEITDQDMQDDEEIDVSRLKLDEE---------DEKDLELDREDLEIRPNDIVILVANTEDD-FSNLEVQIYDEENGSLYVHHEINLPDFPLCLSWMDFNPVPADPTKELES-------GSFVAVGTFKPGIEIWNLDILDVLEPSAILGGEEESMRKNVMPKVSSKKDRQIRLRHGSHTDAVMSLDWNHTHRNMLVSGSADHTVKVWDILTQNCLHTMQHXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLDGRHPDAFSSFPLSADVESIAWAPYQPNKLVAATEDGVVVCYDVRMNASEPLTRFQAHAGTVSAVSFAAQIPGMFATAGIDKTVKIWDL 415          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8255.16405.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.960e-29294.32protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.920e-23799.38protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical1.490e-9242.11protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Periodic6.820e-9042.16tryptophan protein putative n=1 Tax=Albugo laibach... [more]
Uncharacterized1.410e-8841.96protein n=2 Tax=Aphanomyces invadans TaxID=157072 ... [more]
WD402.750e-8848.52repeat-like protein n=1 Tax=Basidiobolus meristosp... [more]
WD40-repeat-containing3.180e-8640.86domain protein n=1 Tax=Thamnocephalis sphaerospora... [more]
WD40-repeat-containing1.840e-8544.96domain protein n=1 Tax=Tribonema minus TaxID=30337... [more]
Predicted1.860e-8247.98protein (Fragment) n=1 Tax=Thalassiosira pseudonan... [more]
Uncharacterized1.910e-8238.90protein n=2 Tax=Albugo candida TaxID=65357 RepID=A... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8255contigE_fasciculatus_S2_contig8255:1668..6755 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score668.7
Seed ortholog evalue2e-189
Seed eggNOG ortholog2880.D8LS73
Preferred namePWP1
Model size1459
KEGG koko:K14791
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001932,GO:0001933,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005794,GO:0006139,GO:0006325,GO:0006351,GO:0006355,GO:0006356,GO:0006359,GO:0006364,GO:0006396,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007548,GO:0008150,GO:0008152,GO:0008213,GO:0008406,GO:0008584,GO:0009058,GO:0009059,GO:0009653,GO:0009719,GO:0009725,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010646,GO:0012505,GO:0016043,GO:0016070,GO:0016072,GO:0016569,GO:0016570,GO:0016571,GO:0018022,GO:0018023,GO:0018130,GO:0018193,GO:0018205,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019953,GO:0022412,GO:0022414,GO:0022613,GO:0023051,GO:0030154,GO:0030707,GO:0030718,GO:0030723,GO:0030855,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031400,GO:0031490,GO:0031974,GO:0031981,GO:0032259,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032868,GO:0032869,GO:0032870,GO:0033135,GO:0033137,GO:0033139,GO:0033140,GO:0034470,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0034770,GO:0034773,GO:0034968,GO:0035064,GO:0036098,GO:0036211,GO:0042221,GO:0042254,GO:0042325,GO:0042326,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043434,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045137,GO:0045478,GO:0045595,GO:0045597,GO:0045893,GO:0045935,GO:0045936,GO:0045943,GO:0045945,GO:0046425,GO:0046483,GO:0046546,GO:0046661,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048608,GO:0048609,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051276,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0061458,GO:0065007,GO:0070013,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0080090,GO:0090069,GO:0090070,GO:0090304,GO:0097159,GO:0097659,GO:0098727,GO:0140030,GO:0140034,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901836,GO:1901838,GO:1902531,GO:1902680,GO:1903506,GO:1903508,GO:1904892,GO:1990889,GO:2000112,GO:2000736,GO:2000738,GO:2001141
Exons9
EggNOG free text desc.H4K20me3 modified histone binding
EggNOG OGsKOG0270@1,KOG0270@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-12_004590.1
Cds size1395
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8255.16405.1prot_E_fasciculatus_S2_contig8255.16405.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8255 1732..6755 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842485.9008389-UTR-E_fasciculatus_S2_contig8255:1667..17311696842485.9008389-UTR-E_fasciculatus_S2_contig8255:1667..1731Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8255 1668..1731 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842485.9190335-CDS-E_fasciculatus_S2_contig8255:1731..17521696842485.9190335-CDS-E_fasciculatus_S2_contig8255:1731..1752Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8255 1732..1752 +
1696842485.9332583-CDS-E_fasciculatus_S2_contig8255:1956..20391696842485.9332583-CDS-E_fasciculatus_S2_contig8255:1956..2039Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8255 1957..2039 +
1696842485.9515254-CDS-E_fasciculatus_S2_contig8255:2821..32421696842485.9515254-CDS-E_fasciculatus_S2_contig8255:2821..3242Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8255 2822..3242 +
1696842485.962898-CDS-E_fasciculatus_S2_contig8255:3577..37531696842485.962898-CDS-E_fasciculatus_S2_contig8255:3577..3753Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8255 3578..3753 +
1696842485.9726295-CDS-E_fasciculatus_S2_contig8255:4238..43641696842485.9726295-CDS-E_fasciculatus_S2_contig8255:4238..4364Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8255 4239..4364 +
1696842485.9821465-CDS-E_fasciculatus_S2_contig8255:4709..48241696842485.9821465-CDS-E_fasciculatus_S2_contig8255:4709..4824Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8255 4710..4824 +
1696842486.0002363-CDS-E_fasciculatus_S2_contig8255:5381..54911696842486.0002363-CDS-E_fasciculatus_S2_contig8255:5381..5491Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8255 5382..5491 +
1696842486.0125527-CDS-E_fasciculatus_S2_contig8255:6030..61421696842486.0125527-CDS-E_fasciculatus_S2_contig8255:6030..6142Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8255 6031..6142 +
1696842486.023765-CDS-E_fasciculatus_S2_contig8255:6524..67551696842486.023765-CDS-E_fasciculatus_S2_contig8255:6524..6755Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8255 6525..6755 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8255.16405.1

>prot_E_fasciculatus_S2_contig8255.16405.1 ID=prot_E_fasciculatus_S2_contig8255.16405.1|Name=mRNA_E_fasciculatus_S2_contig8255.16405.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=465bp
MISSLSWVPRGASKSKPLRYEVSQRELEEMMREQGIEEDEEVADDNDILG
DGAEGVAGGAAAGGGDDELPPELRMDDYDNEPGLTVSGPRDGGEGGDNGS
DSDDDGGDDLDAMEEEEEEEEEEDEGEGEAMGVSLLEEPSTGQVFAYESE
GEDSDTEDNIIKPGDHVLLTASTEEDEHSALEVQVYSEETGNLYVHHDIA
LPSLPLCLAWMDMPPRTAAMSRVSGSADEGHTVGSYCAVGTFEPGIEIWN
LDVLDPLEPTATLGGFKEKDKKPGKKPRKRQTVPGSHTDAVLALSWNREH
RHVLASGSGDNTVKVWDVTTQQCSATLTHHSDKVQGVAWHPVEATVMATV
GYDRVLALLDARAPTKVTKHTIQADPECLLWNPHNPAQILTGSEDGVVCC
RDVRRPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAE
VPLQVRVLLPPPAQ*
back to top

mRNA from alignment at E_fasciculatus_S2_contig8255:1668..6755+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8255.16405.1 ID=mRNA_E_fasciculatus_S2_contig8255.16405.1|Name=mRNA_E_fasciculatus_S2_contig8255.16405.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5088bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8255:1668..6755+ (Ectocarpus fasciculatus EfasUO2)
GCTTGAGGCACGTAACACAGCCTCGCTCTCCACACAGCCCACGCGGCGGC ACACAAAGTGAAACATGATCAGCTCGCTGTCATGGGTGAGTAATTATAGT TTGAGTGCTTTCCTGACAAAGAGAGATAAACCTGGGGTATAATACATAGT TCGTTGGAAAGACATTCACCACCAGTCTAGCTGGCTGCGGCATGTTGTGC GCGATTTCTCTGTTTTACTGCTGTCTGTCCTTGCTTCGCACCTCAGCCCG GGCGCCGCTGTTCCCTTTCCGCCGCTCTCCGTTCGGCAGGTTCCCAGGGG GGCTTCGAAAAGCAAGCCTCTGCGCTACGAGGTGTCGCAACGCGAGCTGG AGGAGATGATGCGGGAGCAAGGGTAAGAGAGGGACAGAGAGAGGGCGGAG AATCGTGAGGGATTGAACCCAGGACTGGTTGTGTGTGCACGTGTGCACCA CATGCTGTAGCCACAGGAGTAGTAAACCCGATTGTTCCCGGCACCTGATT GAGGTACACAATAACACTACACACAGCCTCCGGGGTGGCCAACTACATGA CGAGTCGTGTTGAGAGCACTATCTGTACGAGCTCGCAGCATCCACAGCCA AGGCCATGAGACAGGATAGGACCTTCCCGCACTCCTCACTCCCGAAGCAG AGGGTGGGGGTTGGTGGATCTCGACAGTCCAGTGCAACGGTTGTGTTCAT GGACGACTATGTACCTCTTATAGCCGCGGTGGTATGATAGCATGGTACAT CAGACCGCGTGGTTGCAGCCATTTTCTTGTCGCTGGCATGTTTATAATGC TGTATCGTCGGCGTTCTTCTCCTTCTGTGTAGATGGCATGTGAAATACAT GCCGCCGCGGCTACGGGAGGATAGCTGGGGTGTGTTGCTCATGTTTACCA GCGCGCACGGGGTGAAAGTAACACGCTACACGTTCGCCTTGGCATTTTTT TTGTGAGCTTACGTTTTTTGGTGCAGCGATGCAGACCTCTGTGCAAACAA ATTTCCAGCACGACTGGCTGTATGTAGGACATCCAACCTGGTAGATACAC CGAGCCCTCAAACCTCCGCTCCACCACGTTTGCATTCCCCCCCCTCTCTC TCTTCGCCTCCGCTGGCCCTCTCTCTCTATTCTCCCCTCCGCTAACCTCT TCAGGATAGAAGAGGACGAAGAGGTGGCCGACGACAACGATATCCTCGGC GACGGCGCTGAGGGAGTTGCCGGAGGCGCCGCCGCTGGCGGCGGCGATGA CGAGCTGCCTCCCGAACTGCGCATGGACGACTACGACAACGAGCCGGGGC TAACGGTATCGGGGCCCCGGGACGGCGGCGAAGGCGGGGACAACGGGAGT GATTCCGACGACGACGGCGGTGATGACTTGGACGCCATGGAGGAGGAGGA GGAAGAGGAAGAAGAAGAGGATGAGGGCGAGGGTGAGGCGATGGGCGTGA GCTTGCTGGAGGAGCCCAGCACGGGGCAGGTGTTCGCGTACGAGTCGGAG GGGGAGGACTCCGACACCGAGGACAACATCATCAAGCCCGGGGACCACGT GCTGCTCACCGCCAGCACCGAAGAGGTACGTGTTTATGTACGCGGGGTTT ACCTTGCCTCTCGCGAGTGAAATAGTAAAGGTGTTACGCCTCCTAGGCCA CGCGTGTGTGTGCAAGCACAGGCTGCTGGGAGTTTCCCTTTTTCTGAGAG CTGTACACTCGTTTGCTTCACGCACGGCTGCTACACAACAGGAGAGGCGC AAGACTTATCTCCCGCAGAGGTCAATCTACGATTTTCTTGCTGTCTTGTT TACCTCTGTGCTGTGGGTCTCACGCCTTCCGTCGCCTCCACCTCATCCCC TCGTCCCTTGCCCCCTAACGGTACCCTCACGCTATTTTTGTTGTTGACGC GTGGGATCAGGACGAGCACTCGGCTCTCGAGGTTCAGGTGTACTCGGAGG AAACGGGCAACCTGTACGTGCATCACGACATCGCCCTGCCGTCGCTGCCC TTGTGCCTCGCCTGGATGGACATGCCGCCGAGAACGGCGGCGATGTCGAG GGTGTCCGGGAGTGCCGACGAGGGTCACACCGTCGGGTGAGCTGCCTGCA TTTTAAGCTTGCGTTTGGGTTAGGCTCGTCAGCGCTCCGATGTCTGTATG GTGTTGGTTGGTTGGGTACCACGAAGCATGATGTGCGTCGTGCTTGTTTG CGACAGCGGTTGTGATAGTCGGTGGCTTCGCAAGATTAGGAAGACGTTAC CGGTGTTGGTTGGTAGAGAGGCAGGCAGGCGACCTGGCTCCTCTTTTTTG TGCTGGGTTGTCTTCACGTGCTTCGTCCCTCGCCTGCTGTGCCCGCCCCC GTGCCTTTATGTGTCTCTCTGTCCGTCTCACCTTCCCCGTCATTTGGCTC AGCGGTACAATACAAACAATGATGAATTTCAAAACGCCGCTCTTGGTTCC CGTTCTGCACCTCTCCGTCGTGACTTCATGACCGTCGCATAAATATACTA TACGTTACTCTTCGCCGTTGTTCCCCTCGGTTTTGCCCTGCATCTTTTCG TGTCTTGGTTCATATGCACAGGAGCTACTGCGCGGTGGGCACCTTCGAAC CGGGGATCGAGATCTGGAACCTTGACGTGTTGGACCCTTTGGAGCCGACG GCGACGCTAGGCGGCTTCAAGGAAAAGGACAAGAAGCCAGGGAAAAAGTG AGAGAACATGGGCCAGGCCTTTCTCTCGGCCGGTCTTGAGGGATGCCGAA CAGCTGCGGAGGGGGGGCAGGGGATCACAGGGCCGAGGTCTCGTTGTACA CAAGTTAGTTGGGTAGAAGAGTTCCATTCGATGGGCTGGCCACTTCATTG CTGCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTGTCTGGCCTCCCGCTCTTCATGTTTGTTTTGAACGCCTTGCG TGTGTGTGCGTTTGTCTTTACTACTAGCATCGACCGCACCAACCGGCTGA CCAATGAAAAACATGCGTGTGTGCGTGTGTGCGTACGAGCAGGCCCAGAA AACGGCAGACCGTTCCCGGGAGCCACACCGACGCGGTCCTGGCGCTGAGC TGGAACCGGGAGCACAGACACGTGCTAGCGAGCGGTTCGGGGGACAACAC CGTCAAGGTAGGCATAGACACCAGAGAGAGAGAGATGACCGTCCCCGTGC CATGGCTGCTCTTGCTTCCTCCCTCCCTTCCTTGTAGATAGCACAAAGAA GGTGATTTCCAGTGGCCCGTTCTTCTTTTCTGCCGTAGCTCGTCTCAAGA ACGGTCGATCTTGGGGGGTGCTGCCTGCTTGCTGAATACTGTACCATGGC GCAGGCCACGACTGCAGTGCGACTGCTACTGCGCTTTGTATCACGCTTCC GGCAGAACATTGGTCCGAACTTGCCGCACGCTTGATTCCAACGCGTGGCG CCGCCTGCTAAGCGGTACTGCTTCCTTCTAAGGAGGATTGCTTGCTGTGC GTGGATTGTGACTTTGTTTTCAGAGTGCGGTTCGAATCTTGTCATGTGCT GCCCATCCTCGTATTTTTGCGGACAGCCTTCATCCCCCCGCCTCCTCTCT TTCCTGACCCATGATCTCAATCCAAGACATGAACGATTTTTGTTATTGAT ATTTTTATATGTTTCTCGTGGTGGTGGTGGTGATGGCTGTCTTCGCGGTG CCATGCGTTGACAGGTGTGGGACGTGACGACGCAGCAGTGCTCGGCGACG CTCACGCACCACTCCGACAAGGTGCAGGGGGTGGCCTGGCACCCCGTCGA AGCGACCGTCATGGCTACCGTGGGGTGAGAAAAATTCGACGCCCTCTTCT TCCTCCTCCCTGCAGCAGTCTTGCGAGATGTCAAGCGAAAGGAATATACA TGTCAAAATAATTCGTTCGCACGAGTCCAATTTTTGAGAAGAAGTCCCGC GTGCTTTCGATTGGGTACACGCCGCTCAGGGTTCTTGGGGCCTAGGTACT GTCGTGTCGTGTCGTGTTGTTGTTGTATTCACAATAAAAACCGTTCCGAT CGTTTTGCTCTGTGCTTCTTTTTTTTTCCTGTTCCACATCGGGTTTATAT CTATCCACAGATAATTAGTCCGGGACAACATTTGCCCTGAATCCATAGAG TTAGCGGGAGCACTCCCGGTGTGTTTCTACGACTTCCCGAGCAGTCATAT CATACCTGCATTCAAGACATGTTGTTTTCCGACTGAGCCTGTTCCTGGGG CTGTTGAGCGTTTGTCCGTCTACCATCGGCATCTAACATCTCTTTGTTAC ATCCTCCACGTTGCCACCGTCCGTGTAACCGTCTTCTCGTCGATCTCTTG CGGTAATAATAAGTTACGACCGGGTGCTCGCGCTGCTGGACGCGCGTGCG CCGACGAAGGTGACGAAACACACGATACAGGCGGACCCGGAGTGCTTGTT GTGGAATCCCCACAACCCGGCTCAGGTGGGTTGTCGTTCTCGTCGTCGTC GCCGTCGTTGGTTGTTAGGTTGTTAGATTGTTAGATTGTTTACATGCGTC CACAAGGATTTTGCGAAGCTGGCAGCGTTGCATGTTGACCTTGTAACTCT CACGTCGTTCATCTTGCCACAAACTTCGCCAGAATGTAAAACAATATCGA CTCACGCATCGTCGCATTTGCTCACAAACAGAGGTTTGCGCGCGCAGCAC ACACACAAGAGAGAATAAAACAACGTCTGCCAAAAAACTCCCAATTCGAT CTCAAAAACAACTTCAATATCAGCCAACGAAATCCCATATCCCAAAAAAC TACCATCGAACATGACAACATGATCCAAAATGCAACCAACCAACCAACTG TATGTAGATTTTGACGGGATCGGAGGACGGCGTGGTCTGCTGTCGCGACG TCCGCCGGCCGGAGAGCCCGGTGTACTCCTTCACCGCCCACGAGAAGGGC GTCAGCGCCGTCTCCTTCACGCCCCTGGTGCCGGGCATGCTTGCCACGTG CTCGGAGGACAAGACCGTTAAGGTCTGGGACGTGGACGCCGAGGTCCCTC TCCAGGTACGTGTTTTGCTGCCCCCCCCCGCCCAGTAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8255:1668..6755+

>mRNA_E_fasciculatus_S2_contig8255.16405.1 ID=mRNA_E_fasciculatus_S2_contig8255.16405.1|Name=mRNA_E_fasciculatus_S2_contig8255.16405.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1395bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8255:1668..6755+ (Ectocarpus fasciculatus EfasUO2)
ATGATCAGCTCGCTGTCATGGGTTCCCAGGGGGGCTTCGAAAAGCAAGCC
TCTGCGCTACGAGGTGTCGCAACGCGAGCTGGAGGAGATGATGCGGGAGC
AAGGGATAGAAGAGGACGAAGAGGTGGCCGACGACAACGATATCCTCGGC
GACGGCGCTGAGGGAGTTGCCGGAGGCGCCGCCGCTGGCGGCGGCGATGA
CGAGCTGCCTCCCGAACTGCGCATGGACGACTACGACAACGAGCCGGGGC
TAACGGTATCGGGGCCCCGGGACGGCGGCGAAGGCGGGGACAACGGGAGT
GATTCCGACGACGACGGCGGTGATGACTTGGACGCCATGGAGGAGGAGGA
GGAAGAGGAAGAAGAAGAGGATGAGGGCGAGGGTGAGGCGATGGGCGTGA
GCTTGCTGGAGGAGCCCAGCACGGGGCAGGTGTTCGCGTACGAGTCGGAG
GGGGAGGACTCCGACACCGAGGACAACATCATCAAGCCCGGGGACCACGT
GCTGCTCACCGCCAGCACCGAAGAGGACGAGCACTCGGCTCTCGAGGTTC
AGGTGTACTCGGAGGAAACGGGCAACCTGTACGTGCATCACGACATCGCC
CTGCCGTCGCTGCCCTTGTGCCTCGCCTGGATGGACATGCCGCCGAGAAC
GGCGGCGATGTCGAGGGTGTCCGGGAGTGCCGACGAGGGTCACACCGTCG
GGAGCTACTGCGCGGTGGGCACCTTCGAACCGGGGATCGAGATCTGGAAC
CTTGACGTGTTGGACCCTTTGGAGCCGACGGCGACGCTAGGCGGCTTCAA
GGAAAAGGACAAGAAGCCAGGGAAAAAGCCCAGAAAACGGCAGACCGTTC
CCGGGAGCCACACCGACGCGGTCCTGGCGCTGAGCTGGAACCGGGAGCAC
AGACACGTGCTAGCGAGCGGTTCGGGGGACAACACCGTCAAGGTGTGGGA
CGTGACGACGCAGCAGTGCTCGGCGACGCTCACGCACCACTCCGACAAGG
TGCAGGGGGTGGCCTGGCACCCCGTCGAAGCGACCGTCATGGCTACCGTG
GGTTACGACCGGGTGCTCGCGCTGCTGGACGCGCGTGCGCCGACGAAGGT
GACGAAACACACGATACAGGCGGACCCGGAGTGCTTGTTGTGGAATCCCC
ACAACCCGGCTCAGATTTTGACGGGATCGGAGGACGGCGTGGTCTGCTGT
CGCGACGTCCGCCGGCCGGAGAGCCCGGTGTACTCCTTCACCGCCCACGA
GAAGGGCGTCAGCGCCGTCTCCTTCACGCCCCTGGTGCCGGGCATGCTTG
CCACGTGCTCGGAGGACAAGACCGTTAAGGTCTGGGACGTGGACGCCGAG
GTCCCTCTCCAGGTACGTGTTTTGCTGCCCCCCCCCGCCCAGTAG
back to top