mRNA_E_fasciculatus_S2_contig8254.16403.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8254.16403.1 vs.
Match: BTB (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYK4_ECTSI) HSP 1 Score: 257 bits (657), Expect = 1.220e-85 Identity = 138/151 (91.39%), Postives = 139/151 (92.05%), Query Frame = 1
Query: 1 IRGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQLAALEEAKRKEKAKSFACRVTIVEGAADGGVAGQGTGGGVG--TARERYGTGYFTLDEDF 447
+ GKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQL ALEEAKRKEKAKSFACRVTIVEGAADG AGQG TARERYGTGYFTLDEDF
Sbjct: 37 VGGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQLEALEEAKRKEKAKSFACRVTIVEGAADG-TAGQGXXXXXXXXTARERYGTGYFTLDEDF 186
BLAST of mRNA_E_fasciculatus_S2_contig8254.16403.1 vs.
Match: BTB/POZ (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP50_9STRA) HSP 1 Score: 144 bits (363), Expect = 4.080e-41 Identity = 89/163 (54.60%), Postives = 106/163 (65.03%), Query Frame = 1
Query: 1 IRGKKFLTSRSTIMQAGNCMLASMFRGKFNMET-DEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQLAALEEAKRKE--KAKSFACRVTIVEG----------AADGGVAGQGTGGGVGTA-RERYGTGYFTLDEDF 447
+ G++F TS TI GN MLA+MF +T D +GF FIDRDG+RF HVLNFLRC SLPSFDEAWRYE IMEEADF+A+EEL++LC ++ +AK KE +AKS +CRVTIVE AA G G G G RE +GT FTLDEDF
Sbjct: 12 VGGRRFCTSIETIQGHGNSMLAAMFSNPLYKKTEDAQGFVFIDRDGDRFPHVLNFLRCGSLPSFDEAWRYEAIMEEADFFAVEELKQLCAARVEESAQAKEKEEERAKSMSCRVTIVEAPKPLAAPLAVAALTGELDPGPQWGTGVPPREAFGTFEFTLDEDF 174
BLAST of mRNA_E_fasciculatus_S2_contig8254.16403.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0D8_9STRA) HSP 1 Score: 104 bits (259), Expect = 3.480e-25 Identity = 51/119 (42.86%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 1 IRGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQLAALEEAKRKEKAKSF-----ACRVTIV 342
+ G K+ TSR T+MQ + MLA MF G + + DE G+AFIDRDG RFRH+LN+LR ++P+F++ WR++E++EEADF+ + +LR+L E +++ ++ + +E+A+ C+V I+
Sbjct: 34 VGGVKYHTSRGTLMQCPSSMLARMFSGTWTVHEDE-GYAFIDRDGTRFRHILNYLRNRTVPAFEDEWRFQEVLEEADFFGLPDLRDLVEAKISQMKAQRAEERAEDAKSSGQVCQVMIL 151
BLAST of mRNA_E_fasciculatus_S2_contig8254.16403.1 vs.
Match: Potassium (channel tetramerisation domain-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y739_GALSU) HSP 1 Score: 77.0 bits (188), Expect = 6.770e-15 Identity = 33/84 (39.29%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 1 IRGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEEL 252
+ GK F T+ T+ + + ML++ F GK+++ DE G+ F+DRDG+RFRH+LN+LRC ++ ++ EI+EEA+++ ++ L
Sbjct: 13 VGGKYFETTVDTLTKYSDSMLSAWFSGKYSVLKDENGYVFLDRDGDRFRHILNYLRCGTVHIGEDIRLLGEILEEAEYFGLQSL 96
BLAST of mRNA_E_fasciculatus_S2_contig8254.16403.1 vs.
Match: Ofus.G08467 (protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TZ96_OWEFU) HSP 1 Score: 76.3 bits (186), Expect = 5.850e-14 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 1 IRGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAIEELRELCERQLAALEEAKRKE 306
+ G + T+R T+ N M+ +MF G + DE G FIDRDGE F++VLNFLR S+L D Y ++ EADFY I+ L +L + ++E K+KE
Sbjct: 29 VGGVIYTTTRLTLTTYPNTMIGAMFNGNMSNTKDEHGRIFIDRDGELFKYVLNFLRSSTLSLPDGFKDYSSLLAEADFYQIQPLTDLVRNIIQEIDEEKKKE 130
BLAST of mRNA_E_fasciculatus_S2_contig8254.16403.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3THN5_EMIHU) HSP 1 Score: 77.8 bits (190), Expect = 7.150e-14 Identity = 50/107 (46.73%), Postives = 64/107 (59.81%), Query Frame = 1
Query: 1 IRGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSS--LPSFDEAWRYEEIMEEADFYAIEELRELC-----ERQLAALEEAKR 300
I G +F TSR+T+ A MLA+MF G+ + TDE+G+ FIDRDG F H+LNFLR LP + A R E++ EADFY L E+ ER+L AL A R
Sbjct: 86 IGGHRFTTSRTTLC-ARESMLATMFSGRHQIATDEDGYTFIDRDGRNFHHILNFLRTGEIMLPETEAARR--ELLAEADFYQFTALLEIFGRGRFERELGALNVAMR 189
BLAST of mRNA_E_fasciculatus_S2_contig8254.16403.1 vs.
Match: Putative (FH protein n=1 Tax=Pyrus x bretschneideri TaxID=225117 RepID=W8SZD1_9ROSA) HSP 1 Score: 75.5 bits (184), Expect = 9.520e-14 Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 IRGKKFLTSRSTIMQAG-NCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAI 243
+ GKKF T+ T+ Q + MLA+MF G+ + D++G+ FIDRDGE FRH+LN+LR +P EA +Y E+++EA +Y +
Sbjct: 15 VGGKKFSTTVDTLTQRQPDSMLAAMFSGRHTLRQDKKGYVFIDRDGEHFRHILNWLRDGEIPKL-EASQYAELVKEAKYYQL 95
BLAST of mRNA_E_fasciculatus_S2_contig8254.16403.1 vs.
Match: FH (protein interacting protein FIP2-like n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5GMK0_9ROSA) HSP 1 Score: 75.5 bits (184), Expect = 1.010e-13 Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 IRGKKFLTSRSTIMQAG-NCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAI 243
+ GKKF T+ T+ Q + MLA+MF G+ + D++G+ FIDRDGE FRH+LN+LR +P EA +Y E+++EA +Y +
Sbjct: 15 VGGKKFSTTVDTLTQRQPDSMLAAMFSGRHTLRQDKKGYVFIDRDGEHFRHILNWLRDGEIPKL-EASQYAELVKEAKYYQL 95
BLAST of mRNA_E_fasciculatus_S2_contig8254.16403.1 vs.
Match: FH (protein interacting protein FIP2-like n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0010A9FBA1) HSP 1 Score: 75.1 bits (183), Expect = 1.270e-13 Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 IRGKKFLTSRSTIMQAG-NCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCSSLPSFDEAWRYEEIMEEADFYAI 243
+ GKKF T+ T+ Q + MLA+MF G+ + D++G+ FIDRDGE FRH+LN+LR +P EA +Y E+++EA +Y +
Sbjct: 15 VGGKKFSTTVGTLTQRQPDSMLAAMFSGRHTLRQDKKGYVFIDRDGEHFRHILNWLRDGEVPKL-EASQYAELVKEAKYYQL 95
BLAST of mRNA_E_fasciculatus_S2_contig8254.16403.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SCY6_9CHLO) HSP 1 Score: 72.8 bits (177), Expect = 2.750e-13 Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 1
Query: 1 IRGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLRCS----SLPSFDEAWRYEEIMEEADFYAI 243
+ G KF TS T+ N L S+F G+F + D++G FIDRDG FRH+LNFLR L + +A R EEI+EEA+FY +
Sbjct: 48 VGGHKFTTSLQTLTAMPNTYLESLFSGRFELNLDDDGVYFIDRDGTHFRHILNFLRTYPRRLDLRTMPQAQR-EEILEEAEFYGM 131 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8254.16403.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8254.16403.1 >prot_E_fasciculatus_S2_contig8254.16403.1 ID=prot_E_fasciculatus_S2_contig8254.16403.1|Name=mRNA_E_fasciculatus_S2_contig8254.16403.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=150bp IRGKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHback to top mRNA from alignment at E_fasciculatus_S2_contig8254:554..2284+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8254.16403.1 ID=mRNA_E_fasciculatus_S2_contig8254.16403.1|Name=mRNA_E_fasciculatus_S2_contig8254.16403.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1731bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8254:554..2284+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8254:554..2284+ >mRNA_E_fasciculatus_S2_contig8254.16403.1 ID=mRNA_E_fasciculatus_S2_contig8254.16403.1|Name=mRNA_E_fasciculatus_S2_contig8254.16403.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=450bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8254:554..2284+ (Ectocarpus fasciculatus EfasUO2)back to top |