mRNA_E_fasciculatus_S2_contig8252.16402.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: PKD (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M0_9PHAE) HSP 1 Score: 483 bits (1244), Expect = 4.690e-165 Identity = 230/279 (82.44%), Postives = 249/279 (89.25%), Query Frame = 1
Query: 106 ATSDAITFRSSNDYPPVTGS-KWDNIAEPYRRTTFTASSTVGNPDVDVFQWSFEDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTNG 939
ATSDAITF+ +N YPP T S KWD+IAEP+R TT TASSTVG+PD DVFQWSF DGTVLEGR V+ T S+G H+V+L QIDV+TG V+RM SHVMVKYVRREIRQL DEDREAFFDAMETLYRLPT+EG A+YGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIES++GLT+YGES IFAADWFG+ASPDNSLHTVD GRWAYLP ATD+VHNPYGLLRSPWNVDGTPFVTR+NLTNG
Sbjct: 87 ATSDAITFQCTNGYPPATTSTKWDHIAEPHRSTTLTASSTVGDPDADVFQWSFGDGTVLEGRTVEYTFTSVGLHDVALRQIDVSTGNVYRMSSHVMVKYVRREIRQLKDEDREAFFDAMETLYRLPTSEGNAVYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESAQGLTEYGESTIFAADWFGEASPDNSLHTVDKGRWAYLP--------GATDYVHNPYGLLRSPWNVDGTPFVTRFNLTNG 357
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: PKD (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSP4_ECTSI) HSP 1 Score: 430 bits (1106), Expect = 6.890e-144 Identity = 200/275 (72.73%), Postives = 230/275 (83.64%), Query Frame = 1
Query: 112 SDAITFRSSNDYPPVTGSKWDNIAEPYRRTTFTASSTVGNPDVDVFQWSFEDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
++ ++F SSN+Y P TGS W ++AEP+R TTFTASST+G PD DVF+WSFEDGTVLEGR VK K+LG+ VSL QI V+TG H VMVKYVRREIR L+D+DREAFFDAMETLYRLPT EGR LYG+EYKGINFFVQMHL+GAGV DCDHWHDDAGIMTHHVGYTL FEQALQVVDP+V+IPYWEYTIE++ GL DY S +FA+DWFG+ASPDN LHTVD GRWA+LPVM+ DA +VHNPYGLLRSPWN D TP+VTR+N+TN
Sbjct: 105 TEGLSFVSSNEYLPTTGSPWTHLAEPFRDTTFTASSTLGRPDEDVFKWSFEDGTVLEGREVKHNFKTLGRQRVSLSQIVVSTGNTHETVGSVMVKYVRREIRSLTDKDREAFFDAMETLYRLPTVEGRELYGEEYKGINFFVQMHLNGAGVSDCDHWHDDAGIMTHHVGYTLLFEQALQVVDPAVTIPYWEYTIEAAAGLEDYDSSEVFASDWFGEASPDNELHTVDKGRWAFLPVME-----DAWHYVHNPYGLLRSPWNTDPTPYVTRHNVTN 374
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: PKD (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J9_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 7.910e-141 Identity = 199/277 (71.84%), Postives = 227/277 (81.95%), Query Frame = 1
Query: 106 ATSDAITFRSSNDYPPVTGSKWDNIAEPYRRTTFTASSTVGNPDVDVFQWSFEDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
AT+D + +SN YP + S W N+AEP+R TT TA S+VG+PD DVF+WSFEDGTVLEGR V K +G VSL Q V+TG + ++ VMVKYVRRE+RQL EDREAF DAME LYRLPT EG ALYGD+YKGI+FFVQMHLDGAGV DCDHWHDDAGIMTHHVGYT+ FEQALQVVDPSV+IPYWEYTIE S+GLTDYGES IFA DWFGDASP+N++HTVDNGRWAYLPVMQ DA D+VHNPYGLLR+PWN D TP+VTR+N+TN
Sbjct: 90 ATADDLWLDTSNAYPRLANSAWANLAEPFRDTTLTAGSSVGDPDRDVFKWSFEDGTVLEGREVTYMFKGVGAQTVSLAQTMVSTGRIVQIEDSVMVKYVRREVRQLKAEDREAFLDAMEKLYRLPTEEGVALYGDDYKGISFFVQMHLDGAGVSDCDHWHDDAGIMTHHVGYTMLFEQALQVVDPSVTIPYWEYTIEYSQGLTDYGESQIFAPDWFGDASPNNAMHTVDNGRWAYLPVMQ-----DAWDYVHNPYGLLRTPWNTDPTPYVTRHNMTN 361
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: TYR (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ6_9PHAE) HSP 1 Score: 385 bits (988), Expect = 1.920e-128 Identity = 192/308 (62.34%), Postives = 221/308 (71.75%), Query Frame = 1
Query: 106 ATSDAITFRSSNDYPPVTGSKWDNIAEPYRRTTFTASSTVGNPDVDVFQWSFEDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIES---SEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTA----------------------------NDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
AT++ + +SN YP + S W +AEP+R TT TA S+VG+PD DVF+WSFEDGTVLEGR V K +G V L Q V+TG + ++ VMVKYVRRE+RQL EDREAF DAMETLYRLPT EG ALYGD+YK MHLDGAGV DCDHWHDDAGIMTHHVGYT+ FEQALQVVDP+V+IPYWEYTIE S+GLTDYGES IF DWFGDASP+N++HTVDNGRWAYLPVMQAS A DA D+VHNPYGLLR+PWN D TP+VTR+N+TN
Sbjct: 7 ATANDLWLDTSNAYPRLANSAWAKLAEPFRETTLTAGSSVGDPDKDVFKWSFEDGTVLEGREVTYIFKGVGAQTVFLAQTIVSTGRIVQIEDTVMVKYVRREVRQLRAEDREAFLDAMETLYRLPTEEGVALYGDDYK-------MHLDGAGVSDCDHWHDDAGIMTHHVGYTMLFEQALQVVDPAVTIPYWEYTIECGCHSQGLTDYGESQIFDPDWFGDASPNNAMHTVDNGRWAYLPVMQASPAIAVLHCTLTGLIIYIHPTVDTIYRVAQDGDAWDYVHNPYGLLRTPWNTDPTPYVTRHNMTN 307
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: TYR (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKB4_9PHAE) HSP 1 Score: 356 bits (913), Expect = 2.670e-115 Identity = 162/277 (58.48%), Postives = 210/277 (75.81%), Query Frame = 1
Query: 112 SDAITFRSSNDYPPVTGSKWDNIAEPYRRTTFTASSTVGNPDVDVFQWSF--EDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
+ ++ S+N YP ++ S W ++AEP+R + A S VGNPD DVF W+ E+G +GR ++ T G+ ++ L Q +TGE H + +H+MVKYVRREIR L + DR AFFDA+ETLYRLPT+EG +G +YKGI++FVQ+HLDGAGVKDCDHWHDDAGIMTHHVG+TLQFEQA+Q+VDPSV+IPYWEY+IE+++ L YG+S++F DWFG+ SP+N HT+ GRWA+L V + DA D VHNPYGLLRSPWNVD TPFVTR+N T+
Sbjct: 89 TSVLSLTSTNGYPDISWSPWAHLAEPHRASVLRAESQVGNPDDDVFLWTLPNENGASFQGREIEYTFTEPGRKDIVLTQTVTSTGERHTLHTHIMVKYVRREIRTLHNSDRVAFFDALETLYRLPTSEGVQQFGSDYKGIDYFVQLHLDGAGVKDCDHWHDDAGIMTHHVGFTLQFEQAMQLVDPSVTIPYWEYSIEATDDLDSYGDSIVFDHDWFGEFSPNNDFHTMTKGRWAFLRVQR-----DAWDSVHNPYGLLRSPWNVDDTPFVTRHNTTS 360
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: Tyrosinase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K0_ECTSI) HSP 1 Score: 349 bits (895), Expect = 6.240e-115 Identity = 164/218 (75.23%), Postives = 188/218 (86.24%), Query Frame = 1
Query: 286 RVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTNG 939
R VK K++G+HEVSLMQI V+TGEV+ M S VMVKYVRREIRQL+D+DREAFFDAMETLYRLPT EG ALYG++YKGI FFVQMHLDGA VK+CDHWHDDAGI+THHVG+TL FEQALQVVDPSVSIPYWEYTIE++ GL +YGES +F WFGDASPDNSLHTV +GRWA+L +M+ +A D+VHNPYGLLR+PWN DGTPFVTRY+ NG
Sbjct: 3 RRVKHKFKAVGRHEVSLMQIVVSTGEVYHMSSSVMVKYVRREIRQLTDKDREAFFDAMETLYRLPTGEGVALYGEDYKGIEFFVQMHLDGAAVKECDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYGESQVFHPGWFGDASPDNSLHTVTDGRWAFLSIMK-----EAWDYVHNPYGLLRAPWNTDGTPFVTRYDKING 215
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: Putative (scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J8_ECTSI) HSP 1 Score: 352 bits (904), Expect = 2.330e-113 Identity = 163/277 (58.84%), Postives = 208/277 (75.09%), Query Frame = 1
Query: 112 SDAITFRSSNDYPPVTGSKWDNIAEPYRRTTFTASSTVGNPDVDVFQWSF--EDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
+ ++ ++N YP + S W ++AEP+R T A S VGNP+ DVF W+ E+G EGR ++ G+ ++ L Q +TGE + + +++MVKYVRREIR L++ DR AFFD +ETLYRLPT++G +G +YKGI++FVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQA+Q+V+PSVSIPYWEYTIE++EGL YGES +F DWFG+ SP N LHTV GRWA+LP+ DA D VHNPYGLLRSPWN++ TPFVTR+N T+
Sbjct: 89 TSVLSLTATNGYPDIVWSPWVHLAEPHRATVLRAESQVGNPNDDVFLWTIPNENGASFEGREIEYIFTDPGRKDIVLTQTVTSTGERYSLHTYIMVKYVRREIRALNNADRVAFFDTLETLYRLPTSQGVEEFGTDYKGIDYFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQAMQLVNPSVSIPYWEYTIEATEGLPSYGESTVFNDDWFGEFSPRNELHTVTKGRWAFLPIQP-----DAWDSVHNPYGLLRSPWNLNPTPFVTRHNATS 360
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4W0_HETAK) HSP 1 Score: 242 bits (617), Expect = 6.400e-73 Identity = 127/281 (45.20%), Postives = 169/281 (60.14%), Query Frame = 1
Query: 115 DAITFRSSNDYPPVT--GSKWDNIAEPYRRTTFTASSTVG--NPDVDVFQWSFEDGTVLEGR--VVKRTLKSLGQHEVSLMQIDVAT-GEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
D ++F + N Y T S W ++AEPYR TTF A + D+++ W DG VL + + T S G V++ + GE RS V+VKYVRREIR L+ +DRE +AME +YRL +G ALYG ++ I F HLDGAG +CDHWHDDAG+ HH G+T+QFE+ +Q++DP VS+PYWEYT+++ E L + S IF DWFG SP N H VD GRW +L + ++ D V N YGLLR+PWN D TP++TRY N
Sbjct: 74 DGLSFATYNSYTKDTPIDSMWTHVAEPYRETTFRAKVPTEWLSADLEIV-WEI-DGQVLPDKDTTIVHTFTSTGPTSVAVTIANPERFGEKETYRSDVVVKYVRREIRSLTADDRERTLNAMEAIYRLSQTDGEALYGPNFRSIGSFQVQHLDGAGRMECDHWHDDAGLAAHHFGFTIQFEEVMQLIDPLVSLPYWEYTLDA-ENLDELEHSPIFRDDWFGKMSPTNEKHIVDTGRWKFLEIGYSA---DFDFDVQNAYGLLRAPWNTDSTPYLTRYKYVN 348
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCA4_HETAK) HSP 1 Score: 243 bits (620), Expect = 1.610e-71 Identity = 128/281 (45.55%), Postives = 169/281 (60.14%), Query Frame = 1
Query: 115 DAITFRSSNDYPPVT--GSKWDNIAEPYRRTTFTASSTVG--NPDVDVFQWSFEDGTVLEGR--VVKRTLKSLGQHEVSLMQIDVAT-GEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
D ++F + N Y T S W ++AEPYR TTF A + D+++ W DG VL + + T S G V++ + GE RS V+VKYVRREIR L+ +DRE +AME +YRL +G ALYG ++ I F HLDGAG +CDHWHDDAG+ HH G+T+QFE+ +Q++DP VS+PYWEYT+++ E L + S IF DWFG SP N H VD GRW +L + ++ D V N YGLLR+PWN D TPF+TRY N
Sbjct: 74 DGLSFATYNSYTKDTPIDSMWTHVAEPYRETTFRAKVPTEWLSADLEIV-WEI-DGQVLPDKDTTIVHTFTSTGPTSVAVTIANPERFGEKETYRSDVVVKYVRREIRSLTADDRERTLNAMEAIYRLSQTDGEALYGPNFRSIGSFQVQHLDGAGRMECDHWHDDAGLAAHHFGFTIQFEEVMQLIDPLVSLPYWEYTLDA-ENLDELEHSPIFRDDWFGKMSPTNEKHIVDTGRWKFLEIGYSA---DFDFDVQNAYGLLRAPWNTDSTPFLTRYKYVN 348
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGQ1_9STRA) HSP 1 Score: 236 bits (602), Expect = 3.580e-69 Identity = 126/284 (44.37%), Postives = 177/284 (62.32%), Query Frame = 1
Query: 109 TSDAITFRSSNDY-PPVTGSKWDNIAEPYRRTTFTASSTVGNPDVD-VFQWSFEDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIES---SEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDF--VHNPYGLLRSPWNVDGTPFVTRYNLTNG 939
+++ + F SN+Y V G KWD+I EPYR TT TA + + D + + W D TV +V T + +G + V++ + S V KYVRRE+R ++ DRE F D + LY L T +G+A YG++YK I++FV+ HL GA DCDHWHD+AGIMTHH+ +TL+ EQ LQ VDP++S+PYWEYT +S ++G D+ S +F +WFG ASP ++ H V GRWAY P+M +DA+D+ + N YGLLRSPWN + T + TRY+ G
Sbjct: 76 SANELKFSVSNEYGQSVKGYKWDHIVEPYRLTTLTA--ILNDDDQEGTYIWVVGD-TVSSTKVAYYTFQDVGFNLVNVSWTSLDGETKLSASSQVACKYVRREMRAMTVSDRERFLDTLRLLYDLKTKDGQASYGEKYKDIHYFVKKHLHGAAALDCDHWHDNAGIMTHHLAFTLELEQTLQAVDPAISVPYWEYTKDSILHADG--DWESSEVFLDEWFGVASPTSNDHVVTEGRWAYAPIM-----SDASDYSNITNSYGLLRSPWNTNPTAYFTRYDKVLG 349 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8252.16402.1 >prot_E_fasciculatus_S2_contig8252.16402.1 ID=prot_E_fasciculatus_S2_contig8252.16402.1|Name=mRNA_E_fasciculatus_S2_contig8252.16402.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=308bp MSTPSPRFVLDGRTAVRAPKKEEQQQQQQQATSDAITFRSSNDYPPVTGSback to top mRNA from alignment at E_fasciculatus_S2_contig8252:358..5822- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8252.16402.1 ID=mRNA_E_fasciculatus_S2_contig8252.16402.1|Name=mRNA_E_fasciculatus_S2_contig8252.16402.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5465bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8252:358..5822- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8252:358..5822- >mRNA_E_fasciculatus_S2_contig8252.16402.1 ID=mRNA_E_fasciculatus_S2_contig8252.16402.1|Name=mRNA_E_fasciculatus_S2_contig8252.16402.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=924bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8252:358..5822- (Ectocarpus fasciculatus EfasUO2)back to top |