prot_E_fasciculatus_S2_contig8247.16394.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8247.16394.1
Unique Nameprot_E_fasciculatus_S2_contig8247.16394.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length131
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8247.16394.1 vs. uniprot
Match: D1J716_ECTSI (50S ribosomal protein L12, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=D1J716_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 3.470e-61
Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 0
Query:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXDNGSGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130
            MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXX N SGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK
Sbjct:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXXNASGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130          
BLAST of mRNA_E_fasciculatus_S2_contig8247.16394.1 vs. uniprot
Match: A0A6G6D787_ECTSI (50S ribosomal protein L12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A6G6D787_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 9.940e-61
Identity = 127/130 (97.69%), Postives = 128/130 (98.46%), Query Frame = 0
Query:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXDNGSGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130
            MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDAS+GXXXXXXXXXXXXXX N SGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK
Sbjct:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASSGXXXXXXXXXXXXXXXNASGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130          
BLAST of mRNA_E_fasciculatus_S2_contig8247.16394.1 vs. uniprot
Match: A0A1I9LVX1_9PHAE (50S ribosomal protein L12, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVX1_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 4.440e-55
Identity = 106/131 (80.92%), Postives = 113/131 (86.26%), Query Frame = 0
Query:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDAS-AGXXXXXXXXXXXXXXDNGSGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130
            MT+KISTLIDELKTLTLLEAAELVKAIEETFDVDAS AG              DN S EEKTEFDVSLDEVPKDKKISILKI+RS+TELGLKEAKEVVENTPKVI+EGL+K+AAEE KK+LEEAGAVVTLK
Sbjct:    1 MTKKISTLIDELKTLTLLEAAELVKAIEETFDVDASPAGGGVMMMNAGATISEDNVSDEEKTEFDVSLDEVPKDKKISILKIIRSITELGLKEAKEVVENTPKVIKEGLSKTAAEETKKLLEEAGAVVTLK 131          
BLAST of mRNA_E_fasciculatus_S2_contig8247.16394.1 vs. uniprot
Match: A0A8F0FB01_9PHAE (Ribosomal protein L12 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB01_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 1.230e-54
Identity = 117/130 (90.00%), Postives = 123/130 (94.62%), Query Frame = 0
Query:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXDNGSGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130
            MTEKISTLI+ELKTLTLLEAAELVKAIEETFDVDASAG XXXXXXXXXXXXX     EEKTEFDVSLDEVPKDKKISILK+VRS+TELGLKEAKEVVENTPKVI+ GLTKSAAEEAKK+LE+AGAVVTLK
Sbjct:    1 MTEKISTLIEELKTLTLLEAAELVKAIEETFDVDASAGGXXXXXXXXXXXXXXXXXAEEKTEFDVSLDEVPKDKKISILKVVRSVTELGLKEAKEVVENTPKVIKAGLTKSAAEEAKKLLEDAGAVVTLK 130          
BLAST of mRNA_E_fasciculatus_S2_contig8247.16394.1 vs. uniprot
Match: A0A5B9RE57_9PHAE (50S ribosomal protein L12, chloroplastic n=28 Tax=Laminariales TaxID=2886 RepID=A0A5B9RE57_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 5.000e-54
Identity = 116/130 (89.23%), Postives = 123/130 (94.62%), Query Frame = 0
Query:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXDNGSGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130
            MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXX   + EEKTEFDVSLDEVPKDKKI ILK+VRS+TELGLKEAKE+VENTPKVI+EGLTK+AAEE KK LE+AGAVVTLK
Sbjct:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXXGEAAEEKTEFDVSLDEVPKDKKIPILKVVRSVTELGLKEAKELVENTPKVIKEGLTKAAAEETKKTLEDAGAVVTLK 130          
BLAST of mRNA_E_fasciculatus_S2_contig8247.16394.1 vs. uniprot
Match: A0A6B7EZL5_9PHAE (50S ribosomal protein L12 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EZL5_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 1.480e-53
Identity = 118/131 (90.08%), Postives = 125/131 (95.42%), Query Frame = 0
Query:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXDNGS-GEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130
            MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXX     GEEKTEF+VSLDEVPKDKKISILK+VR++TELGLKEAKEVVENTPKVIQEGLTK+AAEE KK+LE+AGAVVTLK
Sbjct:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXXXXXXGEEKTEFNVSLDEVPKDKKISILKVVRAVTELGLKEAKEVVENTPKVIQEGLTKAAAEETKKLLEDAGAVVTLK 131          
BLAST of mRNA_E_fasciculatus_S2_contig8247.16394.1 vs. uniprot
Match: A0A8F0F840_9PHAE (Ribosomal protein L12 n=1 Tax=Postelsia palmaeformis TaxID=105414 RepID=A0A8F0F840_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 4.100e-53
Identity = 101/130 (77.69%), Postives = 108/130 (83.08%), Query Frame = 0
Query:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXDNGSGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130
            MTEKISTLID LKTLTLLEAAELVKAIEETFDVDAS G              +  + EEKTEFD+SLDEVPKDKKI ILKIVRSLTELGLKEAKE+VENTPKVI+EGLTK+AAEE KK LE+AGAVVTLK
Sbjct:    1 MTEKISTLIDGLKTLTLLEAAELVKAIEETFDVDASTGGGVMMMSQGGSVSDNGETAEEKTEFDISLDEVPKDKKIPILKIVRSLTELGLKEAKELVENTPKVIKEGLTKAAAEETKKTLEDAGAVVTLK 130          
BLAST of mRNA_E_fasciculatus_S2_contig8247.16394.1 vs. uniprot
Match: D1GJP6_FUCVE (50S ribosomal protein L12, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJP6_FUCVE)

HSP 1 Score: 164 bits (416), Expect = 4.840e-50
Identity = 99/132 (75.00%), Postives = 109/132 (82.58%), Query Frame = 0
Query:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXX--DNGSGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130
            MTEKISTLI+ELKTLTLLEAAELVK+IEETFDVDA  G                DN + EEKTEFDVSL+EVPKDKKI+ILK+VRS+TELGLKEAKEVVENTPKVI+EGL K AAEEAKK+LE+AGAVV LK
Sbjct:    1 MTEKISTLIEELKTLTLLEAAELVKSIEETFDVDAPTGGASGVMMMNPGAISTEDNNTVEEKTEFDVSLEEVPKDKKIAILKVVRSVTELGLKEAKEVVENTPKVIKEGLPKVAAEEAKKLLEDAGAVVILK 132          
BLAST of mRNA_E_fasciculatus_S2_contig8247.16394.1 vs. uniprot
Match: A0A8E5XRI1_9PHAE (50S ribosomal protein L12, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRI1_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 4.330e-48
Identity = 93/130 (71.54%), Postives = 105/130 (80.77%), Query Frame = 0
Query:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXDNGSGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130
            M EKIS LI+ELK LTLLEAA+LV AIEETF+VDASAG              D    EEKTEFD+SLDEVPKDKKISILK+VR++T+LGLKEAKEVVENTPK+++EGL K AAEEAK +LEEAGAVVTLK
Sbjct:    1 MNEKISPLIEELKNLTLLEAADLVTAIEETFNVDASAGGGVMMMGTTTSPSEDAKPTEEKTEFDISLDEVPKDKKISILKVVRTVTQLGLKEAKEVVENTPKIVKEGLLKEAAEEAKTLLEEAGAVVTLK 130          
BLAST of mRNA_E_fasciculatus_S2_contig8247.16394.1 vs. uniprot
Match: A0A141BSK5_9PHAE (50S ribosomal protein L12, chloroplastic n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSK5_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 9.580e-48
Identity = 110/133 (82.71%), Postives = 121/133 (90.98%), Query Frame = 0
Query:    1 MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXD---NGSGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGAVVTLK 130
            MTEKI TLI+ELKTLTLLEA ELV++IEETF+VDAS GXXXXXXXXXXXXXX    N + EEKTEFD+SLDEVPKDKKI+ILK+VRS+TELGLKEAKEVVENTPKVI+EGL K AAEEAKK LEEAGA+VTLK
Sbjct:    1 MTEKILTLIEELKTLTLLEATELVQSIEETFNVDASTGXXXXXXXXXXXXXXXXXXNKAIEEKTEFDISLDEVPKDKKIAILKVVRSVTELGLKEAKEVVENTPKVIKEGLAKPAAEEAKKSLEEAGAIVTLK 133          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8247.16394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J716_ECTSI3.470e-6198.4650S ribosomal protein L12, chloroplastic n=6 Tax=P... [more]
A0A6G6D787_ECTSI9.940e-6197.6950S ribosomal protein L12 n=1 Tax=Ectocarpus silic... [more]
A0A1I9LVX1_9PHAE4.440e-5580.9250S ribosomal protein L12, chloroplastic n=1 Tax=P... [more]
A0A8F0FB01_9PHAE1.230e-5490.00Ribosomal protein L12 n=1 Tax=Desmarestia aculeata... [more]
A0A5B9RE57_9PHAE5.000e-5489.2350S ribosomal protein L12, chloroplastic n=28 Tax=... [more]
A0A6B7EZL5_9PHAE1.480e-5390.0850S ribosomal protein L12 n=1 Tax=Cladosiphon okam... [more]
A0A8F0F840_9PHAE4.100e-5377.69Ribosomal protein L12 n=1 Tax=Postelsia palmaeform... [more]
D1GJP6_FUCVE4.840e-5075.0050S ribosomal protein L12, chloroplastic n=3 Tax=F... [more]
A0A8E5XRI1_9PHAE4.330e-4871.5450S ribosomal protein L12, chloroplastic n=1 Tax=I... [more]
A0A141BSK5_9PHAE9.580e-4882.7150S ribosomal protein L12, chloroplastic n=15 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036235Ribosomal protein L7/L12, oligomerisation domain superfamilyGENE3D1.20.5.710coord: 4..59
e-value: 3.6E-12
score: 47.9
IPR036235Ribosomal protein L7/L12, oligomerisation domain superfamilySUPERFAMILY48300Ribosomal protein L7/12, oligomerisation (N-terminal) domaincoord: 4..65
IPR008932Ribosomal protein L7/L12, oligomerisationPFAMPF16320Ribosomal_L12_Ncoord: 4..48
e-value: 4.8E-15
score: 55.0
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 60..130
e-value: 7.1E-25
score: 88.8
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 58..130
IPR000206Ribosomal protein L7/L12TIGRFAMTIGR00855TIGR00855coord: 3..130
e-value: 1.7E-35
score: 120.2
IPR000206Ribosomal protein L7/L12HAMAPMF_00368Ribosomal_L7_L12coord: 2..130
score: 22.659
IPR013823Ribosomal protein L7/L12, C-terminalPFAMPF00542Ribosomal_L12coord: 63..130
e-value: 7.3E-24
score: 83.9
NoneNo IPR availablePANTHERPTHR45987:SF439S RIBOSOMAL PROTEIN L12, MITOCHONDRIALcoord: 4..130
NoneNo IPR availablePANTHERPTHR45987FAMILY NOT NAMEDcoord: 4..130
NoneNo IPR availablePRODOMPD001326coord: 64..109
e-value: 2.0E-12
score: 170.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8247contigE_fasciculatus_S2_contig8247:708..1100 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8247.16394.1mRNA_E_fasciculatus_S2_contig8247.16394.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8247 708..1100 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8247.16394.1 ID=prot_E_fasciculatus_S2_contig8247.16394.1|Name=mRNA_E_fasciculatus_S2_contig8247.16394.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=131bp
MTEKISTLIDELKTLTLLEAAELVKAIEETFDVDASAGGGVMMMSGGATT
SEDNGSGEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENT
PKVIQEGLTKSAAEEAKKVLEEAGAVVTLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013823Ribosomal_L7/L12_C
IPR000206Ribosomal_L7/12
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR008932Ribosomal_L7/L12_oligo
IPR036235Ribosomal_L7/L12_oligo_N_sf