mRNA_E_fasciculatus_S2_contig823.16378.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig823.16378.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H6_ECTSI) HSP 1 Score: 762 bits (1967), Expect = 1.500e-268 Identity = 425/471 (90.23%), Postives = 438/471 (92.99%), Query Frame = 1
Query: 1 MMVGAGEQQGAGEEVGGFGPPEYGIPAQPGVELVRLDMAEVPVDRAQSFVRNWAKRRVGPEVDPGWKGTVRLAQAGPKYGVPPTDMPVSDSRSNLGATLSFDGSPSDVINIEVFYLRRGGSCVMVTRGVDGLARLGGMGPQIASLVRHSEDVIKDKLQDDLASFADDYHDRVLRGLAPAAEPYDEE--ERGEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPWMDGSAPPPMERMEDSPERVDLPPWAPAEEQEDQVPSIDTLFDEVDKPKLDAEVFELFKTMEKGEKGEETVIGAEAKGGADSFFADMRADNGTSEAELVTLFEAGKNASRRGGVDESSREERDAMIAANKAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVEV 1407
M+VGAGEQQG GEE G FGPPEY IPAQPG ELVRLDMAEVPVDRAQ FV NWAKRRVGPEVDPGWKGTVRLAQA PKYGVPPTDMPVSDSR+NLGATLSFDGSPSDVINIEVFYLRRGGSCVMVTRG+DGLARLGGMGPQIASLVRHSEDVIKDKLQDDLASF DDYHDRVL+GLAPAAEPYDEE XXXXXXXXXXX XXXXXXXXXXXXAPWMDGSAPPPMERMEDSPERVD PPWAPAE+QED+VPS+DTLFDEVDKPKLDA+VFELFKTMEKGEKGEETVIGAEAKGGADSFFADMRADNGT+EAELVTLFEAGKNASRRGGVDESSREERDAMIAAN+AAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREA++KRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVE+
Sbjct: 1 MVVGAGEQQGGGEETGAFGPPEYEIPAQPGAELVRLDMAEVPVDRAQRFVWNWAKRRVGPEVDPGWKGTVRLAQARPKYGVPPTDMPVSDSRTNLGATLSFDGSPSDVINIEVFYLRRGGSCVMVTRGLDGLARLGGMGPQIASLVRHSEDVIKDKLQDDLASFPDDYHDRVLKGLAPAAEPYDEEGXXXXXXXXXXXXXXXXXXATVLPDGVIDVTPTEXXXXXXXXXXXXAPWMDGSAPPPMERMEDSPERVDFPPWAPAEQQEDEVPSMDTLFDEVDKPKLDAQVFELFKTMEKGEKGEETVIGAEAKGGADSFFADMRADNGTTEAELVTLFEAGKNASRRGGVDESSREERDAMIAANQAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAVDKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVEL 471
BLAST of mRNA_E_fasciculatus_S2_contig823.16378.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR11_9PHAE) HSP 1 Score: 701 bits (1808), Expect = 4.710e-241 Identity = 430/622 (69.13%), Postives = 439/622 (70.58%), Query Frame = 1
Query: 1 MMVGAGEQQGAGEEVGGFGPPEYGIPAQPGVELVRLDMAEVPVDRAQSFVRNWAKRRVGPEVDPGWKGTVRLAQAGPKYGVPPTDMPVSDSRSNLGATLSFDGSPSDVINIEVFYLRRGGSCVMVTRGVDGLARLGGMGPQIASLVRHSEDVIKDKLQDDLASFADDYHDRVLRGLAPAAEPYDEEERGEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----APWMDGSAPPPMERMEDSPERVDLPPWAPAEEQEDQVPSIDTLFDEVDKPKLDAEVFELFKTMEKGEKGEETVIGAEAKGGADSFFADMRADNGTSEAELVTLFEAGKNASRRGGVDE----------------------------------------------------------------------------------------------------------------------------------------------------SSREERDAMIAANKAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVEV 1407
M+VGAGEQQG GEE G FGPPEY IPAQPG ELVRLDMAEVPVDRAQSFVRNWAKRRVGPEVDPGWKGTVRLAQA PKYGVPPTDMPVSDSR+NLGATLSFDGSPSDVINIEVFYLRRGGSCVMVTRG+DGLARLGGMGPQIASLVRHSEDVIKDKLQDDLASFAD YHDRVL+GLAPAAEPYDEE GE +XXXXXXXXXXXXXXXX XXXXXXX APWMDGSAPPPMERMEDSPERVDLPPW PAE+QE +VPSIDTLFDEVDKPKLDAEVFELFKTMEKGEKGEETVIGAEAKGGADSFFADMRA NGT EAELVTLFEAGKNASRRGGVDE SSREERDAMIAAN+AAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMG AIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVE+
Sbjct: 115 MIVGAGEQQGGGEETGAFGPPEYEIPAQPGAELVRLDMAEVPVDRAQSFVRNWAKRRVGPEVDPGWKGTVRLAQARPKYGVPPTDMPVSDSRTNLGATLSFDGSPSDVINIEVFYLRRGGSCVMVTRGLDGLARLGGMGPQIASLVRHSEDVIKDKLQDDLASFADGYHDRVLKGLAPAAEPYDEE--GEQDXXXXXXXXXXXXXXXXATVLPDGVIDVTPTEXXXXXXXXXXXXAPWMDGSAPPPMERMEDSPERVDLPPWVPAEQQEHEVPSIDTLFDEVDKPKLDAEVFELFKTMEKGEKGEETVIGAEAKGGADSFFADMRAGNGTKEAELVTLFEAGKNASRRGGVDEASIPISSDLHQLEVMLGGDTGLRGGIDIFAGPPQPIGGRVGGAAASSSSEAGYRGEGAKACDADGEGGPQRGTYTMFDEYGDPVLELTAEEMDALDEDELLAAMSSVDVLIAELVKSPKDLWNGITASYSDLYLNRCYILAMRARIPKSSREERDAMIAANQAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGDAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVEL 734
BLAST of mRNA_E_fasciculatus_S2_contig823.16378.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC4_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.580e-29 Identity = 67/116 (57.76%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 1057 ERDAMIAANKAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVE 1404
+R + A N A V QLA + Q E+Q+LEKIR ICE A++DM LPDK+R MKPLL+ FVAY+ YAI+ ER A+ +G++PDREPSRWLQVLGVI++GV AEL+K V+ DV+
Sbjct: 79 QRALLQAVNAQATTLVGQLAGLKQAQEVQELEKIRAICETAMDDMARLPDKVRSMKPLLNADFVAYLAYAIEKERGALRAKGMDPDREPSRWLQVLGVIKQGVFAELEKDVYLDVQ 194
BLAST of mRNA_E_fasciculatus_S2_contig823.16378.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL98_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.170e-26 Identity = 60/116 (51.72%), Postives = 79/116 (68.10%), Query Frame = 1
Query: 1057 ERDAMIAANKAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVE 1404
ER + N+ AV V+Q+ + Q E QQLEKIR ICE AL+DM LP ++ M+PLLD F+AY+ YAI ERE I R LNPD EP+ WLQ+LG+I+ GV AEL K + +D++
Sbjct: 5 ERRVLAKINEYAVVCVEQMIEYMQFAEEQQLEKIRSICEVALDDMSKLPAAVKNMRPLLDQDFIAYLDYAIDKEREGIRGRNLNPDLEPTEWLQILGIIKNGVYAELGKGLKEDIK 120
BLAST of mRNA_E_fasciculatus_S2_contig823.16378.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B3W4_9STRA) HSP 1 Score: 118 bits (295), Expect = 8.260e-26 Identity = 62/116 (53.45%), Postives = 84/116 (72.41%), Query Frame = 1
Query: 1057 ERDAMIAANKAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVE 1404
ER + N+ A+ ++LA M Q E QQ++KIR ICEAA+EDMD+LP+K+R MKPLLD FV Y+ YA ER+AIE + L+PDREP+ WLQV+ +IQ+GV AEL + +H +E
Sbjct: 3 ERGVLGRVNQYAIACAEELAAMVQFNEEQQIDKIRLICEAAMEDMDSLPEKVRAMKPLLDRDFVGYLRYAEAKERDAIEAQFLSPDREPTTWLQVISLIQQGVYAELGRDIHIQLE 118
BLAST of mRNA_E_fasciculatus_S2_contig823.16378.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYX0_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.020e-22 Identity = 56/117 (47.86%), Postives = 80/117 (68.38%), Query Frame = 1
Query: 1057 ERDAMIAANKAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVEV 1407
ER A+ N+ A+ V+QL ++ + E QQLEKI +C A EDM LPD++R M+ LLD +F+A++ YAI+ E + +GL+P+REP+ WLQVL VI+KGV+AE V DV+V
Sbjct: 112 ERRALAKVNEYALAMVEQLQELARVAEQQQLEKIARLCRTAQEDMTKLPDEVRKMRSLLDAEFIAFLRYAIEKEAADVASKGLDPEREPTEWLQVLNVIRKGVLAEKAVDVQNDVDV 228
BLAST of mRNA_E_fasciculatus_S2_contig823.16378.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6V5_HETAK) HSP 1 Score: 108 bits (269), Expect = 3.750e-22 Identity = 53/109 (48.62%), Postives = 79/109 (72.48%), Query Frame = 1
Query: 1081 NKAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVEV 1407
N+ AVN +++LA + E QQL+K+ +IC A++DM LP+K+R MK D+ FVAY+ +AI+ ER+ I + L+PDREPS WLQVL +++KG+ ELQK +H+ VE+
Sbjct: 121 NRYAVNLLKELALAMGEHERQQLQKVAEICRVAMDDMRKLPEKVRGMKFFFDEDFVAYLLFAIREERKKIRAQALDPDREPSEWLQVLLILRKGIWRELQKDIHEHVEM 229
BLAST of mRNA_E_fasciculatus_S2_contig823.16378.1 vs.
Match: CS (domain-containing protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M875_9APIC) HSP 1 Score: 95.5 bits (236), Expect = 4.760e-17 Identity = 51/118 (43.22%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 1048 SREERDAMIAANKAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDV 1401
+R+E+D ++ NK V+ + + + + E +QLEKIR +C AL D++ L + MK LL+ F+AY+ +AI ER+ I+K G NPD PSRWL VL +I KGVMA +K + +DV
Sbjct: 1292 TRKEKDILVVINKFVVSLYEDVEALAVQNEKEQLEKIRLLCMQALVDVEKLTEYAESMKQLLNRDFLAYLEFAIHAERKRIQKEGNNPDAAPSRWLMVLMIIHKGVMAIYEKEIWEDV 1409
BLAST of mRNA_E_fasciculatus_S2_contig823.16378.1 vs.
Match: NudC (domain-containing protein 1 (Fragment) n=1 Tax=Hepatocystis sp. ex Piliocolobus tephrosceles TaxID=2600580 RepID=A0A653HFD4_9APIC) HSP 1 Score: 77.0 bits (188), Expect = 3.240e-11 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 1135 EMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDV 1401
E + L+KI+ ICE A+ D L D I MKPLLD F+ Y+ YAIQ E++ ++K+ N PS WL +L +IQKG+ + L+K + QDV
Sbjct: 688 EKEHLKKIQLICEKAIHDEKGLNDFIESMKPLLDYSFLGYIKYAIQMEKKNLQKQKKNFKENPSDWLIILMIIQKGIYSILEKDIWQDV 776
BLAST of mRNA_E_fasciculatus_S2_contig823.16378.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GG33_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 2.400e-10 Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 1129 KLEMQQLEKIRDICEAALE-----DMDT---LPDKIRYMKPLLDDKFVAYMGYAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVH 1392
+LE +QLE IR+IC A++ + D L D +R M+PLL++ F++Y+ YAI E + +RG D E +RW VL ++QKGV AEL +S++
Sbjct: 149 ELEAEQLETIRNICRVAMDPNHATEQDAAFALSDTVRDMRPLLNEDFISYLSYAIAEEEGRLLRRGYLEDPEQNRWWMVLQIVQKGVYAELGRSLN 244 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig823.16378.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig823.16378.1 >prot_E_fasciculatus_S2_contig823.16378.1 ID=prot_E_fasciculatus_S2_contig823.16378.1|Name=mRNA_E_fasciculatus_S2_contig823.16378.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=469bp MMVGAGEQQGAGEEVGGFGPPEYGIPAQPGVELVRLDMAEVPVDRAQSFVback to top mRNA from alignment at E_fasciculatus_S2_contig823:595..9860- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig823.16378.1 ID=mRNA_E_fasciculatus_S2_contig823.16378.1|Name=mRNA_E_fasciculatus_S2_contig823.16378.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=9266bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig823:595..9860- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig823:595..9860- >mRNA_E_fasciculatus_S2_contig823.16378.1 ID=mRNA_E_fasciculatus_S2_contig823.16378.1|Name=mRNA_E_fasciculatus_S2_contig823.16378.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1407bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig823:595..9860- (Ectocarpus fasciculatus EfasUO2)back to top |