mRNA_E_fasciculatus_S2_contig8229.16377.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8229.16377.1
Unique NamemRNA_E_fasciculatus_S2_contig8229.16377.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8229.16377.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG26_ECTSI)

HSP 1 Score: 714 bits (1842), Expect = 2.950e-253
Identity = 366/419 (87.35%), Postives = 388/419 (92.60%), Query Frame = 1 
Query:    1 TPLDEEAAIGGIGGAVPKGVKELAPSATVPMPNHEVSVMPTVVEGRQGAGILAAESLEEAAETKTESEGATMSRELPNGSLVESTFSSLRFRGGTADAPPPASPYPSSSCGANAAKSGSMRGSLTSESSGRGSILAMFRKASQSFSHNNAMSRSQRGNHHQNTSDLEGLQPRMPARGKLTEADEAMLSDSEADYDAFDNNSERVVKKLFSPNFRFLRWHATFMLVALLAFVFYMPIRIAFFPAERGGWYGTDLAWNLVFAIDVLVHLNTGFVDGTTGKVVYSRIAIFQRYAKSSLIVDLLAAFPFTFVPGLGPGSADGNHQIAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVTAHLFGCGWYMLATLLSTECEDLYFEGLPEGEFLFANGLEYTAGDYIASECPWIYR 1257
            T LDEEAAIGGIGGA PKG  ELA SA VP+PNH+VSVMPTVVEGRQGAGI AAE++E  AETKTE EGA MS++LPNGS+VES FSS+RFRGGTADAPP  SPYPSSS GANAAK GSMRGSLT ESSGRGS+LAMFRKAS SFS N+AMSRS RG+H +NTSDL+GLQ RMPARGKLTEADEAMLSDSEADYDAFDNNSERV KKLFSPNFRFLRW+ATFMLVALL FVFY PIRIAFFP+ERG WYG DL W+LVFAIDVLVHLNTGFVDGT GKVVYSR+AI +RYAK +LIVDLLAAFPFTF+PGLGPGSADGNH+IAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVTAHLFGCGWYMLATLLSTECEDLYFEGLPEGEF+FANGLEYTAGDYIASECPWIYR
Sbjct:   26 TLLDEEAAIGGIGGAAPKGGAELAQSAMVPVPNHDVSVMPTVVEGRQGAGIRAAEAVEAVAETKTELEGAAMSKDLPNGSVVESLFSSIRFRGGTADAPPSPSPYPSSSGGANAAKGGSMRGSLTDESSGRGSMLAMFRKASHSFSSNSAMSRSHRGHHQRNTSDLQGLQRRMPARGKLTEADEAMLSDSEADYDAFDNNSERVDKKLFSPNFRFLRWYATFMLVALLTFVFYNPIRIAFFPSERGAWYGIDLVWHLVFAIDVLVHLNTGFVDGTDGKVVYSRMAICRRYAKHALIVDLLAAFPFTFIPGLGPGSADGNHEIAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVTAHLFGCGWYMLATLLSTECEDLYFEGLPEGEFVFANGLEYTAGDYIASECPWIYR 444
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8229.16377.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6P9_9PHAE)

HSP 1 Score: 410 bits (1055), Expect = 9.790e-135
Identity = 197/234 (84.19%), Postives = 214/234 (91.45%), Query Frame = 1 
Query:  556 MLSDSEADYDAFDNNSERVVKKLFSPNFRFLRWHATFMLVALLAFVFYMPIRIAFFPAERGGWYGTDLAWNLVFAIDVLVHLNTGFVDGTTGKVVYSRIAIFQRYAKSSLIVDLLAAFPFTFVPGLGPGSADGNHQIAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVTAHLFGCGWYMLATLLSTECEDLYFEGLPEGEFLFANGLEYTAGDYIASECPWIYR 1257
            MLSDSEADYDAFDN+SERV  KLFSPNFRFLRW+ATFMLVALL FVFYMPIRIAFFP+ERG W+G DLAW+++FAIDVLVHLNTGFVDGTTGKVVYSR+AI QRYAK +LIVDLLAA PFTFVPGLGPGSADGNH+IAYLLSLPKMFQVYWLMTMVYENHRLHEG FLAVRTLL VV+TAHLFGCGWYMLATLL TEC+DLYF+GL E + +F    +Y  G+YIASECPWIYR
Sbjct:    1 MLSDSEADYDAFDNDSERVGTKLFSPNFRFLRWYATFMLVALLTFVFYMPIRIAFFPSERGAWFGIDLAWHVLFAIDVLVHLNTGFVDGTTGKVVYSRMAIGQRYAKGALIVDLLAALPFTFVPGLGPGSADGNHEIAYLLSLPKMFQVYWLMTMVYENHRLHEGMFLAVRTLLCVVMTAHLFGCGWYMLATLLRTECDDLYFDGLAEEDLIF----DYDVGEYIASECPWIYR 230
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8229.16377.1 vs.
Match: Potassium (channel n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VSV5_COLES)

HSP 1 Score: 68.9 bits (167), Expect = 8.340e-9
Identity = 53/200 (26.50%), Postives = 92/200 (46.00%), Query Frame = 1 
Query:  622 LFSPNFRFLRWHATFMLVALLAFVFYMPIRIAFFPAERGGWYGTDLAWNLVFAIDVLVHLNTGFVDGTTGKVVYSRIAIFQRYAKSSLIVDLLAAFPFTFVPGLGPGSADGNHQIAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVT---AHLFGCGWYMLATLLSTECEDLYFEG-LPEGEFLFANGLE 1209
            +  P  RF +    F+L+  +   F+ P+   FF          D+A  + F +D++VH    + D  T ++VY    I +RYAKS L++DLL   P+ ++      +  G  ++ YLL + ++ +V  +    +   +     +L  R +  +VV     H   C +Y LAT L +  E   + G L  GE+ + N  E
Sbjct:   74 IIHPEKRFYQVWTQFILLWAVYSSFFTPLEFGFFRGLPEKLMLLDVAGQIAFLLDIVVHFLLAYRDAQTYRMVYEPTRIAKRYAKSGLVMDLLGCLPWDYIYK----ACGGKEEVRYLLWI-RLSRVRKVTDFFHRLEKDIRVNYLFTRIVKLIVVELYCTHTAACIFYYLATTLPSSMEGYTWIGSLQLGEYSYKNFRE 268
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8229.16377.1 vs.
Match: Potassium (channel n=4 Tax=Gossypium TaxID=3633 RepID=A0A0D2T9M1_GOSRA)

HSP 1 Score: 68.6 bits (166), Expect = 9.430e-9
Identity = 56/212 (26.42%), Postives = 97/212 (45.75%), Query Frame = 1 
Query:  631 PNFRFLRWHATFMLVALLAFVFYMPIRIAFFPAERGGWYGTDLAWNLVFAIDVLVHLNTGFVDGTTGKVVYSRIAIFQRYAKSSLIVDLLAAFPFTFVPGLGPGSADGN-HQIAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVT---AHLFGCGWYMLATLLSTECEDLYFEG-LPEGEFLFANGLE------YTAGDYIA 1233
            P+ R+ R    F+L+  L   F+ P    FF       +  D+A  + F +D+++H    + D  T ++VY R +I  RY KSS ++DLL   P+  +       A G   ++ YLL + ++++V+ +     +  +     +L  R +  + V     H   C +Y LAT L  E E   + G L  G++ +++  E      YT   Y A
Sbjct:  104 PDNRWYRAWTKFILIWALYSSFFTPFEFGFFRGLPENLFVLDIAGQIAFLLDIILHFFLAYRDPQTYRMVYKRTSIAIRYLKSSFLIDLLGCMPWDIIY-----KASGRKEEVRYLLWI-RLYRVHKVTDFFRKMEKDIRINYLFTRIIKLIFVELYCTHTAACIFYYLATTLPREKEGYTWIGSLKLGDYSYSSFREIDLWKRYTTSMYFA 309
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8229.16377.1 vs.
Match: Potassium (channel n=20 Tax=Gossypium TaxID=3633 RepID=A0A5J5RB84_GOSBA)

HSP 1 Score: 68.6 bits (166), Expect = 1.060e-8
Identity = 56/212 (26.42%), Postives = 97/212 (45.75%), Query Frame = 1 
Query:  631 PNFRFLRWHATFMLVALLAFVFYMPIRIAFFPAERGGWYGTDLAWNLVFAIDVLVHLNTGFVDGTTGKVVYSRIAIFQRYAKSSLIVDLLAAFPFTFVPGLGPGSADGN-HQIAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVT---AHLFGCGWYMLATLLSTECEDLYFEG-LPEGEFLFANGLE------YTAGDYIA 1233
            P+ R+ R    F+L+  L   F+ P    FF       +  D+A  + F +D+++H    + D  T ++VY R +I  RY KSS ++DLL   P+  +       A G   ++ YLL + ++++V+ +     +  +     +L  R +  + V     H   C +Y LAT L  E E   + G L  G++ +++  E      YT   Y A
Sbjct:   78 PDNRWYRAWTKFILIWALYSSFFTPFEFGFFRGLPENLFVLDIAGQIAFLLDIILHFFLAYRDPQTYRMVYKRTSIAIRYLKSSFLIDLLGCMPWDIIY-----KASGRKEEVRYLLWI-RLYRVHKVTDFFRKMEKDIRINYLFTRIIKLIFVELYCTHTAACIFYYLATTLPREKEGYTWIGSLKLGDYSYSSFREIDLWKRYTTSMYFA 283
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8229.16377.1 vs.
Match: Potassium (channel n=3 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B7J9_HIBSY)

HSP 1 Score: 67.0 bits (162), Expect = 3.420e-8
Identity = 55/212 (25.94%), Postives = 96/212 (45.28%), Query Frame = 1 
Query:  631 PNFRFLRWHATFMLVALLAFVFYMPIRIAFFPAERGGWYGTDLAWNLVFAIDVLVHLNTGFVDGTTGKVVYSRIAIFQRYAKSSLIVDLLAAFPFTFV-PGLGPGSADGNHQIAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVT---AHLFGCGWYMLATLLSTECEDLYFEG-LPEGEFLFANGLE------YTAGDYIA 1233
            P+ R+ R    F+L+  L   F+ P+   FF       +  D+A  + F +D+++H    + D  T ++VY   +I  +Y KSS ++DLL   P+  +  G G        ++ YLL + ++++V+ +        +     +L  R +  + V     H   C +Y LAT L  E E   + G L  G++ ++N  E      YT   Y A
Sbjct:   75 PDNRWYRAWTKFILIWALYSSFFTPLEFGFFRGLPENLFILDIAGQIAFLLDIVLHFFVAYRDSQTYRMVYKPTSIAIQYLKSSFLIDLLGCMPWDMIYKGCGR-----KEEVRYLLWI-RLYRVHKVTDFFRNMEKDIRINYLFARIIKLIFVELYCTHTAACIFYYLATTLPPEQEGYTWIGSLKLGDYSYSNFREIDLWKRYTTSMYFA 280
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8229.16377.1 vs.
Match: Potassium (channel (Fragment) n=4 Tax=Malvaceae TaxID=3629 RepID=A0A7J9A8X0_9ROSI)

HSP 1 Score: 65.5 bits (158), Expect = 9.600e-8
Identity = 53/201 (26.37%), Postives = 92/201 (45.77%), Query Frame = 1 
Query:  664 FMLVALLAFVFYMPIRIAFFPAERGGWYGTDLAWNLVFAIDVLVHLNTGFVDGTTGKVVYSRIAIFQRYAKSSLIVDLLAAFPFTFVPGLGPGSADGN-HQIAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVT---AHLFGCGWYMLATLLSTECEDLYFEG-LPEGEFLFANGLE------YTAGDYIA 1233
            F+L+  L   F+ P    FF       +  D+A  + F +D+++H    + D  T ++VY R +I  RY KSS ++DLL   P+  +       A G   ++ YLL + ++++V+ +     +  +     +L  R +  + V     H   C +Y LAT L  E E   + G L  G++ +++  E      YT   Y A
Sbjct:    8 FILIWALYSSFFTPFEFGFFRGLPENLFVLDIAGQIAFLLDIILHFFLAYRDPQTYRMVYKRTSIAIRYLKSSFLIDLLGCMPWDIIY-----KASGRKEEVRYLLWI-RLYRVHKVTDFFRKMEKDIRINYLFTRIIKLIFVELYCTHTAACIFYYLATTLPREKEGYTWIGSLKLGDYSYSSFREIDLWKRYTTSMYFA 202
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8229.16377.1 vs.
Match: Potassium (channel n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PYZ4_9MAGN)

HSP 1 Score: 63.9 bits (154), Expect = 3.240e-7
Identity = 46/173 (26.59%), Postives = 81/173 (46.82%), Query Frame = 1 
Query:  694 FYMPIRIAFFPAERGGWYGTDLAWNLVFAIDVLVHLNTGFVDGTTGKVVYSRIAIFQRYAKSSLIVDLLAAFPFTFVPGLGPGSADGNHQIAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVT---AHLFGCGWYMLATLLSTECEDLYFEG-LPEGEFLFAN 1200
            F+ P+   FF       Y  D+A  + F ID++VH    + D  T + VY+   I  RY KS  ++DLL   P+  +      ++    ++ YLL + ++++V  +   + +  +     +L +R +  +VV     H   C +Y LAT L +  E   + G L  G++ F N
Sbjct:   89 FFTPVEFGFFRGLPMNLYFLDIAGQIAFLIDIVVHFFLAYKDSQTYRAVYNHNLIALRYLKSGFLIDLLGCLPWDAIYR----ASGRKEEVRYLLWI-RLWRVRKVTRFLEKMEKDIRINYLFIRIVKLIVVELYCTHTAACIFYYLATTLPSSQEGYTWIGSLRLGDYAFTN 256
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8229.16377.1 vs.
Match: Potassium (channel n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QTV8_9MAGN)

HSP 1 Score: 63.2 bits (152), Expect = 5.500e-7
Identity = 50/185 (27.03%), Postives = 83/185 (44.86%), Query Frame = 1 
Query:  694 FYMPIRIAFFPAERGGWYGTDLAWNLVFAIDVLVHLNTGFVDGTTGKVVYSRIAIFQRYAKSSLIVDLLAAFPFTFVPGLGPGSADGNHQIAYLL--SLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVTAHLFGCGWYMLATLLSTECEDLYFEG-LPEGEFLFANGLEYTAGD-YIAS 1236
            F+ P+   FF       +  D+A  + F ID++VH    + D  T  +V  R  I  RY KS+ I+DLL  FP+  +      +     ++ YLL   L ++ +V      + ++ R++      V+ L   +   H   C +Y LAT L    E   + G L  G++ ++N  E   G  Y+ S
Sbjct:   22 FFTPVEFGFFRGLPRRLFFLDIAGQIAFLIDIIVHFFVTYRDSQTYLMVSKRTTIGLRYLKSNFIIDLLGCFPWDLIYV----ACGRKEEVRYLLWIRLSRVRKVTKFFQKMEKDIRINYLFTRIVKLLAVELYCTHTAACIFYYLATTLPASQEGYTWIGSLKLGDYSYSNFREIDLGKRYLTS 202
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8229.16377.1 vs.
Match: Potassium (channel n=3 Tax=Gossypium TaxID=3633 RepID=A0A7J9FUK8_9ROSI)

HSP 1 Score: 60.5 bits (145), Expect = 4.010e-6
Identity = 51/200 (25.50%), Postives = 88/200 (44.00%), Query Frame = 1 
Query:  694 FYMPIRIAFFPAERGGWYGTDLAWNLVFAIDVLVHLNTGFVDGTTGKVVYSRIAIFQRYAKSSLIVDLLAAFPFTFVPGL---------GPGSADGN-HQIAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVVT---AHLFGCGWYMLATLLSTECEDLYFEG-LPEGEFLFANGLE------YTAGDYIA 1233
            F  P    FF       +  D+A  + F +D+++H    + D  T ++VY R +I  RY KSS ++DLL   P+  +  +          P  A G   ++ YLL + ++++V+ +     +  +     +L  R +  + V     H   C +Y LAT L  E E   + G L  G++ +++  E      YT   Y A
Sbjct:    9 FVTPSEFGFFRGLPENLFVLDIAGQIAFLLDIILHFFLAYRDPQTYRMVYKRTSIAIRYLKSSFLIDLLGCMPWDIIYKVLLSSSTHASFPQQASGRKEEVRYLLWI-RLYRVHKVTDFFRKMEKDIRINYLFTRIIKLIFVELYCTHTAACIFYYLATTLPREKEGYTWIGSLKLGDYSYSSFREIDLWKRYTTSMYFA 207
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8229.16377.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
Cyclic2.950e-25387.35nucleotide-binding domain-containing protein n=1 T... [more]
Cyclic9.790e-13584.19nucleotide-binding domain-containing protein n=1 T... [more]
Potassium8.340e-926.50channel n=1 Tax=Colocasia esculenta TaxID=4460 Rep... [more]
Potassium9.430e-926.42channel n=4 Tax=Gossypium TaxID=3633 RepID=A0A0D2T... [more]
Potassium1.060e-826.42channel n=20 Tax=Gossypium TaxID=3633 RepID=A0A5J5... [more]
Potassium3.420e-825.94channel n=3 Tax=Hibiscus syriacus TaxID=106335 Rep... [more]
Potassium9.600e-826.37channel (Fragment) n=4 Tax=Malvaceae TaxID=3629 Re... [more]
Potassium3.240e-726.59channel n=1 Tax=Cinnamomum micranthum f. kanehirae... [more]
Potassium5.500e-727.03channel n=1 Tax=Macleaya cordata TaxID=56857 RepID... [more]
Potassium4.010e-625.50channel n=3 Tax=Gossypium TaxID=3633 RepID=A0A7J9F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8229contigE_fasciculatus_S2_contig8229:48..6626 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score715.7
Seed ortholog evalue1.3e-203
Seed eggNOG ortholog2880.D8LG26
Model size1257
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.voltage-gated potassium channel activity
EggNOG OGsKOG0498@1,KOG0498@2759
Cds size1257
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8229.16377.1prot_E_fasciculatus_S2_contig8229.16377.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8229 48..6626 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842483.5414433-CDS-E_fasciculatus_S2_contig8229:47..2691696842483.5414433-CDS-E_fasciculatus_S2_contig8229:47..269Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8229 48..269 +
1696842483.5548646-CDS-E_fasciculatus_S2_contig8229:606..7911696842483.5548646-CDS-E_fasciculatus_S2_contig8229:606..791Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8229 607..791 +
1696842483.565247-CDS-E_fasciculatus_S2_contig8229:1464..15911696842483.565247-CDS-E_fasciculatus_S2_contig8229:1464..1591Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8229 1465..1591 +
1696842483.5762968-CDS-E_fasciculatus_S2_contig8229:3033..32331696842483.5762968-CDS-E_fasciculatus_S2_contig8229:3033..3233Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8229 3034..3233 +
1696842483.5871787-CDS-E_fasciculatus_S2_contig8229:4045..41451696842483.5871787-CDS-E_fasciculatus_S2_contig8229:4045..4145Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8229 4046..4145 +
1696842483.5989199-CDS-E_fasciculatus_S2_contig8229:4471..47261696842483.5989199-CDS-E_fasciculatus_S2_contig8229:4471..4726Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8229 4472..4726 +
1696842483.6107116-CDS-E_fasciculatus_S2_contig8229:6458..66261696842483.6107116-CDS-E_fasciculatus_S2_contig8229:6458..6626Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8229 6459..6626 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8229.16377.1

>prot_E_fasciculatus_S2_contig8229.16377.1 ID=prot_E_fasciculatus_S2_contig8229.16377.1|Name=mRNA_E_fasciculatus_S2_contig8229.16377.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=419bp
TPLDEEAAIGGIGGAVPKGVKELAPSATVPMPNHEVSVMPTVVEGRQGAG
ILAAESLEEAAETKTESEGATMSRELPNGSLVESTFSSLRFRGGTADAPP
PASPYPSSSCGANAAKSGSMRGSLTSESSGRGSILAMFRKASQSFSHNNA
MSRSQRGNHHQNTSDLEGLQPRMPARGKLTEADEAMLSDSEADYDAFDNN
SERVVKKLFSPNFRFLRWHATFMLVALLAFVFYMPIRIAFFPAERGGWYG
TDLAWNLVFAIDVLVHLNTGFVDGTTGKVVYSRIAIFQRYAKSSLIVDLL
AAFPFTFVPGLGPGSADGNHQIAYLLSLPKMFQVYWLMTMVYENHRLHEG
TFLAVRTLLSVVVTAHLFGCGWYMLATLLSTECEDLYFEGLPEGEFLFAN
GLEYTAGDYIASECPWIYR
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mRNA from alignment at E_fasciculatus_S2_contig8229:48..6626+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8229.16377.1 ID=mRNA_E_fasciculatus_S2_contig8229.16377.1|Name=mRNA_E_fasciculatus_S2_contig8229.16377.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6579bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8229:48..6626+ (Ectocarpus fasciculatus EfasUO2)
ACCCCCCTAGACGAAGAAGCGGCAATAGGAGGGATCGGCGGGGCTGTACC
GAAGGGAGTCAAAGAACTCGCGCCGTCAGCAACGGTGCCCATGCCCAACC
ACGAGGTGTCCGTGATGCCTACGGTTGTAGAGGGCCGGCAGGGGGCGGGA
ATTCTGGCGGCGGAGTCGCTAGAAGAGGCGGCAGAGACCAAGACGGAGTC
GGAGGGGGCGACGATGTCGAGGGTGAGTCCTCTAGAATCATATGGTTTTT
TGATGGGGTGATGATCGGGGGGGTTCTCTGGCATCGACAGCAGTGAAAGC
AGGAGCAGGGTGGCAGCGGCAAACCAAAGTCCAAAGGCGGGGCAGTAGGC
AGCGGCAACCAAATATTAAATATTACAAAAAAATACGACTGTGTTCGACA
AGACAGCATTAAACACCGAATGGCAAGGGACGCTACTCTGTTCCTTCTCC
GTGGTTCATGTCGGTCGCCCTTTTGTGCGTCCGCACACACACACACACAC
ACACACACACCGCCCCCTGCCGTTTTCCCTCTATCTCTCTCCCTCTCTAC
CTGTCGCAGGAATTACCCAACGGGAGTCTTGTCGAGAGCACGTTTTCTTC
GCTCCGTTTTCGCGGTGGTACGGCAGACGCGCCCCCACCCGCCTCCCCTT
ACCCTTCTTCCTCGTGCGGGGCTAACGCGGCGAAGAGCGGCAGCATGCGA
GGATCTCTGACGTCGGAGTCAAGCGGCAGAGGCTCCATTCTTGCGTGAGT
TGTTGGTAATTGTTACAGGCCTCAGTAACGCTGGCACGGTGTGTACCCGG
CTCTATTCAGAGGGACCGGCGCCATTCGAAGTACATAGTGGCTTGGTAAT
TAAGTCTCCCTAGAGATGGCGATGCGCGGATAGATGTCGTATAAGTATTT
CGTTCAGCAGCGTTACCTCGATTCCATGGTCTGAGAAACCTCTTCTTTCC
AACGTATCGCTCGGTTTCACAGGCGGGTGATGTTGACCGCTAGTAGGGCG
GCGTGTGCTTATTGGTTGGGTGCGAGCTGTTTCGTACCCCTCCAGAGCTC
CGGGCACCCTGCCAAGCAGTGTGTATAATTTCACCGGCGCTGTTCAGGGC
CACCGGCGTTTCTCAACCGGCGTTGTTGGGGGCCCATCACTGTGTGTTGT
TGTGGTTGTGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATGCTGTTGGT
GTTCATGGTGACGATGATGATGTTGTTGTTGTCGTCGTTTTCCTCTTGGT
AGCGTGCTCGAAGAAGTCGGCCCAGAGGTTGCCTTCTGTTTTCATGATAC
GTTTTTTTCGTGCCATTTCTTGTCTCTCATCTGGCTTTGTGTATGTCTTC
TGTTTCTCGTTTTGCAGGATGTTCAGGAAGGCCAGCCAAAGCTTCTCGCA
CAACAACGCTATGTCTCGCAGCCAACGCGGCAACCACCATCAAAACACAT
CAGACCTTGAAGGCCTCCAACCGCGTATGCCGGCTCGCGGCAAGGTGTGT
TATTACTAATAGATAGAGTAGTGTAGAACTTGTCATCCCTATTTTTACAT
CGGATGGTTAACAAAAGATGTTGGCGGTGATCGTGGTAACCGTATCGATG
GTGATCCATCCCAAAATCGGCTACAGAATAATCGGTCAAATCCTGACTAC
TCTCGCTCTGATCTGGCATCTCGCCTCCCGCTTGATACGATATCTCTTTT
TTCATTTGAAGTTTAGCTCGAGCGTGCAGCAGAAATTTGTCTCGGGTGCT
GAGAGTCTCCATTTCGGCTCTCTCTCGAGCTCTCACAGGCCTCCATTTTT
CCCTTCTTCACTTTCCCGCTTTTCCGCTTTTCCGCTTTTCCGCTTTTCCC
TGTATAATTCACCGCTTTCCTTTCTGGCACGAGTAACGTTTCCACCCTTT
CCTCTACTCATGACACACGCCTCGCACAGGGGGGCTTCATCTTCCTCTCT
CGGTTGTCACACGCCAGTCTGCCTTTGCACGTCGCTCTCCACATGTATGT
ACACGTTCATACGTGCACGTTCAACTCTCAACCCTCCTTTTTTTCCGCCT
TTCTGTCGGTCCCGACAAATTGACACACCTCTCAGTCTGTCAGTGGCGTC
AGTCAGCCTCTGCGCGATTTAAGACGTCCATGGACCCGTTCTGCAAGGGT
TCACTATGGGTTGAAGCTGGCCCATTATTTCGCCTCCCGTCCCTTTTCCG
CTGCTGCTCTCATCCATCCACACATGCTAGTCTCTGTCTCCCCTATCACA
CACCAGTCTCTCTCCCCCCTCTCGCGTGTCCCACATAACTGCGCGACACT
CTCTCTCGTTGGAGTTTTCTCTTCGGAACGCTTCTCTTCGAAATTTCCCA
GGACAGGCGGGGGCGGGGTTTCTTATGAAATATACGTGCAACTGCTGAGC
GGGGCGGCGATGGCCGCCAGAGTACGCCCTCTCTCTCTCTCTGCACCAAC
CCGTTTTTCAGTTCCTTTCACTAAATTGCCACCGCTTATCGCGAATCTTG
GAATCGATCTACTGAGCGGGGCGGCGAAGCCGCCAGAACCCCTCGTATTA
TTATAGTACAAGATCTGATTCCCGCCTGAAATGGCCTACGCTATGTATAT
AACAAGGCCGCTCCCGTCACCGGACCTGTTTTTATGTTTCTGAAATAATT
ATGACTCCGTACATGCATGAATAGAACGTATTTTCTACCTACCTCTTGCC
CATGTGCCCCCCCCCCCCCCCTTCCCCGCCCTCACGAACGTTGCTGCGTT
TTATGTAATGTATGAAGTAGAAATATGCTCACACCTCTCCCGCCCAGAAA
GTGAGTGACTCTCAGACCCATACAATACTGTACCATGTTGAGGATCTACA
AAGCTCTGGGCGATACACAATGCATGGGAGTTGTGCCCTCCCACACACAC
ACGCATTTACGAACAAGTTTTTTTTTTTTATACCAGTTGACGGAGGCAGA
CGAAGCCATGCTCTCCGATTCGGAGGCGGACTACGACGCGTTCGACAACA
ACTCGGAGAGGGTGGTCAAGAAGCTCTTCTCGCCCAACTTCCGCTTCCTG
CGGTGGCACGCGACCTTCATGCTCGTCGCTCTGCTCGCCTTCGTGTTCTA
CATGCCCATCAGGATCGCATTCTTCCCTGCGGAACGGTAAGCGGGTGGCA
GCAGCATGGAATTGCCATTGGGGATGATTGATTGTTCATGAAAACAAATC
CGTCTCTGTCCACAGACAATACATAGTTCATGGCAGCTCGTAATAGATCA
ATTGTTTGTGTGTTTTTGTTCGTCCCTCAAAGGACGAAAACACACACAAG
AACCAAACAAATGCACCCTTTTCACAGATAAGACTCTAGGGATTTCCTTT
TTTCATTGCTTGGTCGAACAGACAAGGGAGGAAGAGGGTTTCGTGGTCAT
GTACAGGCGTATTTTGTTAACGAGGAAGCCGTACCTTTCTCTCTGCTAAT
GTCGCGTTGTTTCGTCTTTGCTGGTTGTAAAACTGTGAACACTGCTGTTG
GAAGAGTCGTTCAACTGAAGAAGATAAAGCAGGACATGTTTTGTGTGTGC
AACAAAACACGCTTTACCCAGATGAACTCCGCGCGCGGTGACAGTCGTTC
ACTACTCATAGCTCCTGACAACAGTTCGACAAGCATTCCGAGGTTGCGCG
CCGTACTGCACTGCCGCGGTGATGCTCTCTTGTGGTCTCTCTTGCTTCTC
CAATACGCACCACACACGCCTACGGAAATATGCCAATCTCTCCTCTTCGG
TCTAAGGAGGCTCGATTTTTCTCACCAACCATATCATTGATTTTTCGCGG
AACAGAGTGTTTCCGCCTCGCCGTAGTCAGACGTGAGACTTGAGACTTGA
GACTTGTGTTCACAGCTTCCTTCCGTGTTCATCGAGAGTGGCTCCCAGCA
CCTGCTGATGGTGTATATTCGGTCGACGTGTGTCTCTGTTTGTGGCAGTG
GGGGTTGGTACGGGACTGACCTCGCGTGGAACCTCGTGTTCGCCATCGAC
GTGCTAGTTCACCTAAACACCGGCTTCGTCGACGGCACCACCGGGAAGGT
GAGTCTTGCTGTTGTTGTTGTGCAGTGACGAACCCTCTTGGTGTTTTATC
TGCATCCACGTCTGCTGCGGTGCCTGTTTTGTGGGCCCCCCCCTCTCTCT
CTCTCTCTCTCTGCCGTTTCGATTTGCTTCTCGTTCGGTTGTTCCTGACT
GCTGCAGCTGTAGTTGCTCTGCGGCGTGATTTTCGTGTGTTCATTGCTGC
TGGTGCTGGTGCTGGTGCTGGTGCTACGGCCACCGCCGCTCCTCCTTCGA
TCAATACCAACAGCCTGGCTGCACTATGTACTCATGATCCCGCGTCTTCC
CCCTCCTCCCCGCGAACCTCAAAGGTGGTTTACTCGAGAATAGCCATCTT
CCAGCGCTACGCCAAGAGCTCGCTGATCGTGGACCTGCTCGCGGCGTTCC
CGTTCACGTTCGTCCCCGGCCTGGGACCGGGCAGCGCAGACGGCAACCAC
CAGATAGCCTACCTGCTGAGCCTGCCCAAGATGTTCCAGGTGTACTGGCT
CATGACCATGGTGTACGAGAACCACCGCCTCCACGAGGGGACGTTTCTGG
CCGTCCGGACTCTTCTGTCCGTGGTCGTGGTGAGTTTTTTGTCCGTTGTT
TTTTTTTTCCCATCATTTTTTGTCAACCGTTTTCAGCATTTCTGCCGGGT
GGGAGTTAGCTCCAATCCGTGGACTCACAGAAGGGTTCCTACCCCGTGCT
GAATACTTCGAAGTAGTATACTACCGGGCAATATATGGTAGTAAAAAGGC
TCCCCTGCGGGAGACAGGTGGCTTGCCTCCCGGGGGCGACGCAAGAGGAC
ATGGCCAATGTCATCGCGGTCGCATCGTTGCTCGTTACATCTCAACGCCA
AGACCTTGGTAGTGCCGGTTTCGCGTACTGTACAACCCGCAGAATTTGCC
TGGAATTTGCGTGGTCATGTGAAACCTGTGAGGGATATTTTTTTTCTCGT
GATTGTGTGCGTTTTGGGCTAGTGGCGTCGTTGCTGCAGGTCCTACTTCT
TGCTGTGATCCGCTGCGTTTGATTGCCCACTCTGACGTATCCATGTTGCC
ATGATATGTGGGACATGCGACATGTTTGCGTTGCGCAGGCACCATTTATT
TTTTTCTGTTTTTTGTGCGACGCAGTTTTTTTTGTATTTCTTGCGAAGGC
TTTCTTCGCGCGGAACCCATTTCCGGGTATAGAGCCAGTTTTTTCAACTT
TAAGCGTAACGCACAGGCGTAAAAAGATGGATAGCGGTCCTCGGGCGTGC
GCGGTAATGTACGGACGACCCTCTTGCGTGCCCATGAGAAGGGGCCGTGA
GAAATGATTGACTTGCGCCGGCGAAATATGCCCCGAAACACAAAAACAGG
CGAAATGATGCATTTACATATGAGCATGACGACGTCTTTGTGGCTGACCC
GCACACTCTTGTTCTGTGGAGTAACGGCTTTGAGGTATGTTTGTCGAGGT
ATTGTAGGTTTCGTTCGTCCTTATGTCGTGGAGGGGTTCGGATGGGAGTA
CGAGAGACATCGCGGCTTCGTTAACTGTCCGCACCCCTTCTGTCCGTGGC
AGTGTTGGTGAGTCTTGCTTGCCCCGCCTCGGAGCAGCTTCTCGAAAGGT
ACCTACGGACGGACGGAGCTTTGGTATACTTCCCTGAGTGTGCCTAGGGC
CTGTTGAAAATCGTGCGTTACGTCAAGGGAGAGTATGTCAGGGCTGCCGG
TGCACCTCTGTCCATACTTGTGAGGCAGTCTTGCTTTCGATATCCCACCG
GCAATGGTGGCCCCGGAAAATATGGCTTGATTGATGAAACCAAGGTTGAC
TTTTACACGGCTGCACATGACTGTTGCTGCAGACAACATATGGGTTTGAT
ATTGGTCTGGTTTATATTTATAGTCTGCTTTGCATCGTTTCATGATAAAC
TGGTGCACCATTTGTCGATAGACTGGCCGATCTGAGCGTTCTCGCTCTGT
TGTTGCAGCATGAGGCTCTTCTTTTCCAATGCTTGTGCGTTCCCACGCCG
CGCGAGAGGCTGCTCGCTGGCTGCAGACGTTACTTAGACGTTGCATGCTT
GGGAGAAGCCCTTTCTTGAATCAGAAAAGTAAATGTATGGTGCGAAGACG
CGTGCAAATACAAGTAGGTAGGATGAAACACGGACCCCCCCCCCCCCCGT
TTTTTTTTTTTCTTTGTTTTTTTCTCTCATTGACGCACCTTTTGGTTGTG
TNNNNNNNNNNAATAAGGAATTAATAAAAAAAAGGTTAAAAAAAAAGTTA
AGGGAATAAAAAACGGACCCCCCCCCCCCCCGTTTTTTTCTTCCCGGTGT
ACGTACCTCAGACAGCCCACCTGTTCGGGTGCGGATGGTACATGCTGGCG
ACGTTGCTTAGCACGGAGTGCGAGGACCTGTACTTCGAAGGACTTCCGGA
AGGGGAGTTTCTCTTCGCGAACGGCCTCGAGTACACTGCCGGTGACTACA
TCGCCAGCGAGTGCCCCTGGATCTACAGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8229:48..6626+

>mRNA_E_fasciculatus_S2_contig8229.16377.1 ID=mRNA_E_fasciculatus_S2_contig8229.16377.1|Name=mRNA_E_fasciculatus_S2_contig8229.16377.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1257bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8229:48..6626+ (Ectocarpus fasciculatus EfasUO2)
ACCCCCCTAGACGAAGAAGCGGCAATAGGAGGGATCGGCGGGGCTGTACC
GAAGGGAGTCAAAGAACTCGCGCCGTCAGCAACGGTGCCCATGCCCAACC
ACGAGGTGTCCGTGATGCCTACGGTTGTAGAGGGCCGGCAGGGGGCGGGA
ATTCTGGCGGCGGAGTCGCTAGAAGAGGCGGCAGAGACCAAGACGGAGTC
GGAGGGGGCGACGATGTCGAGGGAATTACCCAACGGGAGTCTTGTCGAGA
GCACGTTTTCTTCGCTCCGTTTTCGCGGTGGTACGGCAGACGCGCCCCCA
CCCGCCTCCCCTTACCCTTCTTCCTCGTGCGGGGCTAACGCGGCGAAGAG
CGGCAGCATGCGAGGATCTCTGACGTCGGAGTCAAGCGGCAGAGGCTCCA
TTCTTGCGATGTTCAGGAAGGCCAGCCAAAGCTTCTCGCACAACAACGCT
ATGTCTCGCAGCCAACGCGGCAACCACCATCAAAACACATCAGACCTTGA
AGGCCTCCAACCGCGTATGCCGGCTCGCGGCAAGTTGACGGAGGCAGACG
AAGCCATGCTCTCCGATTCGGAGGCGGACTACGACGCGTTCGACAACAAC
TCGGAGAGGGTGGTCAAGAAGCTCTTCTCGCCCAACTTCCGCTTCCTGCG
GTGGCACGCGACCTTCATGCTCGTCGCTCTGCTCGCCTTCGTGTTCTACA
TGCCCATCAGGATCGCATTCTTCCCTGCGGAACGTGGGGGTTGGTACGGG
ACTGACCTCGCGTGGAACCTCGTGTTCGCCATCGACGTGCTAGTTCACCT
AAACACCGGCTTCGTCGACGGCACCACCGGGAAGGTGGTTTACTCGAGAA
TAGCCATCTTCCAGCGCTACGCCAAGAGCTCGCTGATCGTGGACCTGCTC
GCGGCGTTCCCGTTCACGTTCGTCCCCGGCCTGGGACCGGGCAGCGCAGA
CGGCAACCACCAGATAGCCTACCTGCTGAGCCTGCCCAAGATGTTCCAGG
TGTACTGGCTCATGACCATGGTGTACGAGAACCACCGCCTCCACGAGGGG
ACGTTTCTGGCCGTCCGGACTCTTCTGTCCGTGGTCGTGACAGCCCACCT
GTTCGGGTGCGGATGGTACATGCTGGCGACGTTGCTTAGCACGGAGTGCG
AGGACCTGTACTTCGAAGGACTTCCGGAAGGGGAGTTTCTCTTCGCGAAC
GGCCTCGAGTACACTGCCGGTGACTACATCGCCAGCGAGTGCCCCTGGAT
CTACAGG
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