mRNA_E_fasciculatus_S2_contig8221.16375.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8221.16375.1 vs.
Match: Profilin (n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT76_ECTSI) HSP 1 Score: 288 bits (737), Expect = 1.870e-98 Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 1
Query: 1 MSGWNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDDGVERDTAINEAADMLGFVTSGNKAATGWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVFDDEACKEHHPSATAGGLACNK 423
MSGWNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDDGVERDTAINEAADMLGFVTSG KAATGWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVFDDEACKEHHPS+TAG LACNK
Sbjct: 1 MSGWNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDDGVERDTAINEAADMLGFVTSGTKAATGWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVFDDEACKEHHPSSTAGALACNK 141
BLAST of mRNA_E_fasciculatus_S2_contig8221.16375.1 vs.
Match: Profilin (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ3_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.750e-32 Identity = 67/142 (47.18%), Postives = 86/142 (60.56%), Query Frame = 1
Query: 10 WNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLR-GYNTAVTGDDGVERDTAINEAADMLGFVTSGNKAAT--GWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVF----DDEACKEHHPSATAGGLA 414
W+AY+ TQL A+G +CQA I GKADMQ YA G F L Y VT +DG E I+E ++ML F TSG G RMN KY +L++ EGP+LYLK + G AC A TN LVIVG++ ++ + H +AT LA
Sbjct: 3 WDAYISTQLTASGVICQAAILGKADMQIYAQEGGFALYPSYQANVTKEDGTEGVETIDEVSEMLAFFTSGGTKMPKFGIRMNQVKYQLLKQAEGPLLYLKCSTGGACVAATNALVIVGIYKGAGNEAQTMQVHCNATVEALA 144
BLAST of mRNA_E_fasciculatus_S2_contig8221.16375.1 vs.
Match: Profilin (n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IT73_9FUNG) HSP 1 Score: 58.9 bits (141), Expect = 2.020e-8 Identity = 37/119 (31.09%), Postives = 55/119 (46.22%), Query Frame = 1
Query: 10 WNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDDGVERDTAINEAADMLGFVTSGNKAATGWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVFDD 366
W YVD LV TG V QA I+G + +A++ DF+L T +N A + GF + TG ++G KY+ LR E + K G AC T ++VG++ +
Sbjct: 3 WQQYVDNNLVGTGQVSQAAIYGLNGAK-WASSPDFELSA--------------TEVNAA--IAGFADPASVQGTGLHISGVKYLTLRADERSIYVKKSAHGGACLVKTGQAILVGLYKE 104
BLAST of mRNA_E_fasciculatus_S2_contig8221.16375.1 vs.
Match: Profilin (n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PS24_MORIS) HSP 1 Score: 57.4 bits (137), Expect = 9.410e-8 Identity = 40/120 (33.33%), Postives = 55/120 (45.83%), Query Frame = 1
Query: 10 WNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDDGVERDTAINEAADMLGFVTSGNKAATGWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVFDDE 369
W AYVDT L+ +G + QAGI+G Q A+ G FQ+ T A GF S N A G R+N KY+ LR + +Y K+ T ++VGV+DD+
Sbjct: 3 WQAYVDTNLLGSGQITQAGIYGAQGGQWAASNG-FQV----------------TPTELQAIQQGFSDSSNLQANGVRINNVKYMFLRS-DDRSIYGKKGNDGVVIVKTVQAILVGVYDDK 104
BLAST of mRNA_E_fasciculatus_S2_contig8221.16375.1 vs.
Match: Profilin (n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7VVR4_9FUNG) HSP 1 Score: 56.2 bits (134), Expect = 2.170e-7 Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 1
Query: 10 WNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDDGVERDTAINEAADMLGFVTSGNKAATGWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVFDDE 369
W AYVDT LV TG V QAGI+G +A + F ++ E T +N GF + + A G R+N KY+ LR E + Y K+ C T ++V ++DD+
Sbjct: 3 WQAYVDTNLVGTGFVSQAGIYGINGGGVWAASPGFSIKP----------TEIQTILN------GFTDADSVRANGIRINDVKYLTLRVDERSI-YGKKNATGFCIVKTTQAILVALYDDK 105
BLAST of mRNA_E_fasciculatus_S2_contig8221.16375.1 vs.
Match: Profilin (n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WKC3_9FUNG) HSP 1 Score: 53.9 bits (128), Expect = 1.610e-6 Identity = 39/119 (32.77%), Postives = 54/119 (45.38%), Query Frame = 1
Query: 10 WNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDDGVERDTAINEAADMLGFVTSGNKAATGWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVFDD 366
W AYVD+ LV TG V QA I+G Q +A + FQL T + E + GF + + A G +NG KY VLR + +Y K+ C T +VGV+ +
Sbjct: 3 WQAYVDSNLVGTGQVTQAAIYGLNGAQ-WATSPGFQLSA--------------TEVQEV--IQGFSAADDIRAKGVHVNGVKYFVLRA-DDRSIYGKKNADGVCLVKTGQAFLVGVYTE 103
BLAST of mRNA_E_fasciculatus_S2_contig8221.16375.1 vs.
Match: Profilin (n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UW86_9FUNG) HSP 1 Score: 56.2 bits (134), Expect = 1.700e-6 Identity = 37/121 (30.58%), Postives = 57/121 (47.11%), Query Frame = 1
Query: 10 WNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDDGVERDTAINEAADML-GFVTSGNKAATGWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVFDDE 369
W +YVD LV TG V QAGI+G +A + F ++ NE +++ GF + + A+G +NGTKY+ L E + Y K+ C T V+V ++DD+
Sbjct: 3 WQSYVDNNLVGTGYVSQAGIYGLNGGGVWAASSGFTVQ-----------------ANEIQEIISGFTKADHILASGIHINGTKYLTLSANERSI-YGKKGSTGVCIVKTTQAVLVALYDDK 105
BLAST of mRNA_E_fasciculatus_S2_contig8221.16375.1 vs.
Match: Profilin (n=4 Tax=Mucor TaxID=4830 RepID=S2JD68_MUCC1) HSP 1 Score: 53.5 bits (127), Expect = 2.260e-6 Identity = 38/119 (31.93%), Postives = 54/119 (45.38%), Query Frame = 1
Query: 10 WNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDDGVERDTAINEAADMLGFVTSGNKAATGWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVFDD 366
W AYVDT L+ TG V QA I+G + +AG FQL+ + E + F + A G +NGTKY++LR E + Y K+ C TN +VG + +
Sbjct: 3 WQAYVDTNLIGTGHVSQAAIYGLNGGEWAKSAG-FQLQ--------------PAEVQEI--IAAFSNADQVRANGIHVNGTKYLLLRADERSI-YGKKNSDGVCIVKTNQAFLVGTYKE 103
BLAST of mRNA_E_fasciculatus_S2_contig8221.16375.1 vs.
Match: profilin-2 (n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A55B9) HSP 1 Score: 52.8 bits (125), Expect = 4.350e-6 Identity = 34/121 (28.10%), Postives = 57/121 (47.11%), Query Frame = 1
Query: 10 WNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDDGVERDTAINEAADMLGFVTSGNKAATGWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVFDDEA 372
W AYVDT L+ +G V +A IFG D C+A + F + + EA D++ + G+ +G + GTKY++LR + + KG T+ +++G +D+ A
Sbjct: 3 WQAYVDTNLLGSGKVQRAAIFGH-DGSCWATSAGFSV-----------------STEEAKDLIKSLNDGS--VSGKSVAGTKYMMLRNHDKTAYLKLKDKGGFTACLTSQCMVLGGYDESA 103
BLAST of mRNA_E_fasciculatus_S2_contig8221.16375.1 vs.
Match: Profilin (n=2 Tax=Mucorineae TaxID=1344963 RepID=A0A1C7NWL5_9FUNG) HSP 1 Score: 52.8 bits (125), Expect = 4.430e-6 Identity = 38/119 (31.93%), Postives = 54/119 (45.38%), Query Frame = 1
Query: 10 WNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDDGVERDTAINEAADMLGFVTSGNKAATGWRMNGTKYVVLRELEGPVLYLKRTKGSACFACTNTLVIVGVFDD 366
W AYVD+ L+ TG V QA I+G + +AG FQL + E D F S A+G +NG KY+ +R E ++Y K+ C A TN +VG + +
Sbjct: 3 WQAYVDSNLLGTGHVSQAAIYGLNGGEWAKSAG-FQLNA--------------NEVKEITDA--FSNSQAVLASGVHVNGVKYLTIRAEEN-LIYAKKGAEGICIAKTNQAFLVGTYKE 103 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8221.16375.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8221.16375.1 >prot_E_fasciculatus_S2_contig8221.16375.1 ID=prot_E_fasciculatus_S2_contig8221.16375.1|Name=mRNA_E_fasciculatus_S2_contig8221.16375.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=141bp MSGWNAYVDTQLVATGAVCQAGIFGKADMQCYANAGDFQLRGYNTAVTGDback to top mRNA from alignment at E_fasciculatus_S2_contig8221:1470..6291- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8221.16375.1 ID=mRNA_E_fasciculatus_S2_contig8221.16375.1|Name=mRNA_E_fasciculatus_S2_contig8221.16375.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4822bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8221:1470..6291- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8221:1470..6291- >mRNA_E_fasciculatus_S2_contig8221.16375.1 ID=mRNA_E_fasciculatus_S2_contig8221.16375.1|Name=mRNA_E_fasciculatus_S2_contig8221.16375.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=423bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8221:1470..6291- (Ectocarpus fasciculatus EfasUO2)back to top |