mRNA_E_fasciculatus_S2_contig822.16373.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig822.16373.1
Unique NamemRNA_E_fasciculatus_S2_contig822.16373.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY36_ECTSI)

HSP 1 Score: 541 bits (1394), Expect = 1.130e-189
Identity = 266/324 (82.10%), Postives = 274/324 (84.57%), Query Frame = 1
Query:  547 IFTPS----------VENLVEAVAAKFKHETTASLPLHVLQFVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQKGAVDEDGGEFRLGYASACRRRSNSVLLQCLTDAGFTTESTCFFCSVQ 1488
            +FTPS          VENLV AVAAKFK E TASLPLHVLQ                   DFREAAEGDGLWREAY+ERFPV      + AGQGGPDAGGGGCGPVD REA ATKPTASG NSS  DEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWE KWDEWV+RDRLRWGNE LAAPLKG PLQAGDAVEVWCKGLHVPGAWLEAVV+EVEKERVYLGEVLTSGHFWA+TEHVRLIQKG VD+DGGEFRLGY SACRRRSNSVLLQCLTDAGFTTESTC +CSVQ
Sbjct:   33 LFTPSLPPFLSLYSTVENLVVAVAAKFKQEVTASLPLHVLQ-------------------DFREAAEGDGLWREAYDERFPVLQSETSESAGQGGPDAGGGGCGPVDCREATATKPTASGRNSSTGDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWEPKWDEWVVRDRLRWGNEHLAAPLKGIPLQAGDAVEVWCKGLHVPGAWLEAVVYEVEKERVYLGEVLTSGHFWARTEHVRLIQKGPVDDDGGEFRLGYTSACRRRSNSVLLQCLTDAGFTTESTCCYCSVQ 337          
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Tudor-knot (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI68_9STRA)

HSP 1 Score: 214 bits (546), Expect = 3.260e-63
Identity = 112/257 (43.58%), Postives = 146/257 (56.81%), Query Frame = 1
Query:  652 FISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQKGAVDEDGGEFRLGYASACRRRSNSV 1422
            F+SL + G L  +S+ +R+ +E D LWRE Y+ RF +   +   G+                  +AA T P +               K  + RRLL P VGD V+VAW+GKFRLESLEV+ G AWWLA VV + +    YKVHYPGWE +WDEWV R+RLRWGN+  AA L G P++ GD VEVWC G+HVPGAWLE  V  +  +R YLG++L +G F       RL++K  +   G E         RRRS +V
Sbjct:    3 FLSLPELGTLARLSKSWRQLSEHDYLWREPYKARFKISDSLLAAGS------------------DAAVTPPLS--------------CKEAFARRLLHPQVGDRVEVAWRGKFRLESLEVFSGLAWWLADVVARSDDCRRYKVHYPGWEPRWDEWVSRERLRWGNDARAARLLGHPVEVGDTVEVWCGGVHVPGAWLEGRVSCIRSDRAYLGDMLAAGTFSIPLARCRLVRKAELMARGEE----EGETVRRRSLNV 223          
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: F-box (domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T606_9STRA)

HSP 1 Score: 211 bits (537), Expect = 2.000e-59
Identity = 123/355 (34.65%), Postives = 175/355 (49.30%), Query Frame = 1
Query:  370 GPAWTVALCALWGCRDIQGLKASLHVTGRVVLDLLPWELSKAFV------------DYERAIKEKRANFTHIFTPSVENL-VEAVAAKFKHETTASLPLHVLQFVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQKGAVDEDGGEFRLGYAS 1395
            G  WT A+  L+  +D + +   L     +   L   +L KA V            D E A+ EK+    ++F P V  L +E +A  F  +    LP  VL +   F+S+S+ G+  +V Q ++E  +   +W+  Y +RF       +   G G P +                                  ++  ++ RLLDPHVGD V+VAWKGKFRLES+++Y G AWW A VV+KGE    YK+HYPGW+S+WDEWV RDRLRW  E+         +   D VE+WC G +VPGAWLEA V +V+ +   +G VL+SG  W   E VR+  KG     G +    + S
Sbjct:  104 GAGWTRAIVDLYNAQDPEQMIRCLQEIQSL---LRTQKLGKAGVAKEQQQSKFCKKDLEAALNEKKKKNPNLFIPDVRRLSLEVMAEFFDKDRVNKLPSAVLIYTASFMSISELGMAASVCQQWKETVQSVAVWKPLYIKRFHFLHSPDDASTGIGLPLS----------------------------------YQALFRARLLDPHVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVARDRLRWTVEQDL----NKRIMPNDDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSGALWVNRERVRISPKGGARSLGKQGASNFFS 417          
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT0_9STRA)

HSP 1 Score: 206 bits (523), Expect = 3.140e-59
Identity = 115/285 (40.35%), Postives = 151/285 (52.98%), Query Frame = 1
Query:  562 VENLVEAVAAKFKH-----ETTASLPLHVLQFVLGFISLSDNG-VLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQKGAVDEDGGEFRLGYASA 1398
            V  + EAVA    H     E  ASLP  +   +  F++L + G  +C VS+ +R+  E + LWRE Y  RF       +                  + +E A   P                 K  + RRL+ P VGD V+VAW+GKFRLESLE+Y+G AWWLA +V+       YKVHYPGWE++WDE+V R+RLRWGN+R AA L+   +  GD VE+WC G +VPGAWLE  V  +  ERV+LG+V+  G F    E  RL+ KGA      E R   A A
Sbjct:    8 VYKVEEAVAVITSHLLRSSEPAASLPPGLFLDIAQFLTLEERGKAVCCVSRKWRQLGEHNHLWREPYLTRFKFHSPQEDLAT-------------HTEAQELAQPGPK---------------VKDLFARRLVRPQVGDRVEVAWRGKFRLESLEIYNGLAWWLAEIVECDADGQRYKVHYPGWEARWDEFVPRERLRWGNDRRAAQLRDERIAVGDMVEIWCGGTNVPGAWLEGRVSSIRGERVFLGDVVAEGFFSVTEERCRLVSKGASAPPQSEGRSDTARA 264          
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: F-box (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D060_9STRA)

HSP 1 Score: 194 bits (494), Expect = 8.870e-55
Identity = 103/272 (37.87%), Postives = 145/272 (53.31%), Query Frame = 1
Query:  502 DYERAIKEKRANFTHIFTPSVENL-VEAVAAKFKHETTASLPLHVLQFVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFW 1314
            D E A+ EK+   + +F P V  L +E +A  F  +    LP  VL +   F+S+S+ G+  +V Q ++E  +   +W+  Y +RF       +   G G P +                                  +   ++ RLLDP+VGD V+VAWKGKFRLES+++Y G AWW A VV+KGE    YK+HYPGW+S+WDEWV RDRLRW  E+         +   D VE+WC G +VPGAWLEA V +V+ +   +G VL+SG  W
Sbjct:   35 DLEAALNEKKKKNSILFIPDVRRLSLEVMAEFFDKDRVNKLPSAVLIYTASFMSISELGMAASVCQQWKETVQSGAVWKPLYIKRFHFLHSPDDASTGIGLPVS----------------------------------YHALFRARLLDPYVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVPRDRLRWTVEQDL----NKRIMPNDDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSGALW 268          
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A403_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.890e-49
Identity = 104/256 (40.62%), Postives = 136/256 (53.12%), Query Frame = 1
Query:  616 SLPLHVLQFVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDK------GEKPG----------YYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVR 1335
            +LP   +   L F+ ++ +  L TVS+D+   +  D LWR+ Y  RF             GG D G G                      +++DE  D +K  YK+RL DPHVGD+V+VAW+GKFRLESLE+Y GTAWW+A VVDK         PG          +YKV +PGWE +WDEWV RDRLRW   R     +   L+  D VEVWC   +VPGAWLEA V ++  + V +G VL++G  W     VR
Sbjct:   96 TLPRDTMLLCLSFLDVTAHTTLSTVSRDWLSLSSEDALWRDHYLNRF------------SGGSDEGDG---------------------ETSADEYED-YKQEYKQRLEDPHVGDDVEVAWRGKFRLESLEIYRGTAWWVAVVVDKVALDAASGSPGRGRKIHAAKAWYKVTFPGWEGRWDEWVSRDRLRW---RAKNTQEADALKPRDFVEVWCGSQNVPGAWLEASVQKIRGDAVEVGRVLSTGSLWVDRSRVR 314          
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SC81_9STRA)

HSP 1 Score: 160 bits (404), Expect = 4.220e-41
Identity = 100/277 (36.10%), Postives = 133/277 (48.01%), Query Frame = 1
Query:  571 LVEAVAAKFKHETTASLPLHVLQ-FVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGE----------------KPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQA-GDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQK 1347
            LV  V   +  +  A LP  +L+  VL  + + +   +  VS+  R AA  D  WR  Y  RF    +  E        D G        +RE+                         +++RL DP  GD V++AW+G+FRLE LEVY G AWW A VV+K +                +   YKVHY  W+++WDEWV RD+LRW       P   T + A GD VEVWC G  VPGAWL AVV  VE E   +G+V +SG  W + + VRLIQ+
Sbjct:   70 LVSLVIHYYPPDRLAGLPRELLEDAVLANLDVKNLAAMAAVSRAARRAASSDAAWRPQYARRFGAADDASEHF------DFG------ASLRES-------------------------FRQRLGDPAPGDRVEIAWRGRFRLEGLEVYRGLAWWAAEVVEKRDAXXXXXXAPDCPLDDRRARKYKVHYVHWDARWDEWVARDQLRW-----PVPEGRTGVVASGDDVEVWCSGSAVPGAWLRAVVTAVEGELYCVGDVASSGRLWVRRDRVRLIQR 304          
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: F-box (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI95_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 5.200e-41
Identity = 94/250 (37.60%), Postives = 132/250 (52.80%), Query Frame = 1
Query:  613 ASLPLHVLQFVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGY-YKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGH--FWAKTEHVRLIQKGA 1353
            A LP  +L   +  +++ D G +C V++D+R AAE D +WR  +  RF                            RE     P    G + A        K  ++ RL DP VGD+V+V+W+G+FRLESL+V+ G +WW A VV K +  G+ YK+HYPGW+S WDEWV+RDRLRW    +      T  +  + VEVWC G HV GAWL+A V ++++++V L  VL S     W     VR +  GA
Sbjct:   27 AGLPRELLARSMELLNMVDLGQVCCVNKDWRNAAEEDAVWRFWWARRF----------------------------RE----DPPPQRGRARAGH-----LKQLHRYRLEDPLVGDKVEVSWEGRFRLESLDVFVGRSWWEATVVQKMD--GFKYKIHYPGWDSNWDEWVVRDRLRWP---VDPSYLSTTFRVREVVEVWCTGTHVKGAWLQARVRQIKQDQVSLKNVLASSPRTVWVPRSKVRRVCTGA 234          
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXB7_9STRA)

HSP 1 Score: 103 bits (258), Expect = 4.350e-23
Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 1
Query: 1072 YKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQK 1347
            YK+HYPGW+++WDEWV R+RLRW       P++    Q  D VEVWC G +VPGAWLEA V  ++ E++++G++L+SG  W     VRL  K
Sbjct:    1 YKIHYPGWDTRWDEWVPRNRLRWAMHHN--PMEN--FQVNDRVEVWCTGSNVPGAWLEAQVKAIKGEQIFVGKMLSSGPLWVAKTRVRLCPK 88          
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Hypothetical (protein n=4 Tax=Lotharella TaxID=74819 RepID=A0A7S3Z4G2_9EUKA)

HSP 1 Score: 105 bits (262), Expect = 1.410e-21
Identity = 57/166 (34.34%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  913 FKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEV-----YDGTAWWLARVVDKGEKPG----------YYKVHYPGWESKWDEWVLRDRLRWGNER-LAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVE-----KERVYLGEVLTSGHFWAKTEHVRLIQK 1347
            F+  +  R+  P VGD V+V W+GKF   +L       ++G AWW A VV +  + G          YY+ H+PGWESKWDEW+ R ++RW       A L+   +  GD VEV  +   VP  W+E  V +V       E   +G +    H W + + +RL+ K
Sbjct:  109 FRDEFFSRVSSPRVGDCVEVLWQGKFYSHTLGEHGTMGFEGKAWWQASVVAREPESGENGQQSDNQFYYRAHFPGWESKWDEWITRGQIRWPKPMDYQAELE---IDVGDHVEVLLESTRVPSVWMEGDVKKVTIDIDGVELFLVGGMKRPRHIWVRRDSIRLLYK 271          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
Uncharacterized1.130e-18982.10protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Tudor-knot3.260e-6343.58domain-containing protein n=1 Tax=Tribonema minus ... [more]
F-box2.000e-5934.65domain-containing protein n=1 Tax=Nannochloropsis ... [more]
Uncharacterized3.140e-5940.35protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
F-box8.870e-5537.87domain-containing protein n=1 Tax=Nannochloropsis ... [more]
Hypothetical2.890e-4940.63protein n=2 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical4.220e-4136.10protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
F-box5.200e-4137.60domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Hypothetical4.350e-2348.91protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical1.410e-2134.34protein n=4 Tax=Lotharella TaxID=74819 RepID=A0A7S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig822contigE_fasciculatus_S2_contig822:4974..9463 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score543.1
Seed ortholog evalue1.3e-151
Seed eggNOG ortholog2880.D7FY36
Model size1491
Hectar predicted targeting categoryother localisation
Exons6
EggNOG OGs2D67V@1,2T127@2759
Ec32 ortholog descriptionF-box and Chromo domain-like protein
Ec32 orthologEc-27_006970.1
Cds size1491
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig822.16373.1prot_E_fasciculatus_S2_contig822.16373.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig822 4974..9463 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842483.154598-CDS-E_fasciculatus_S2_contig822:4973..51741696842483.154598-CDS-E_fasciculatus_S2_contig822:4973..5174Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig822 4974..5174 -
1696842483.168003-CDS-E_fasciculatus_S2_contig822:5720..59331696842483.168003-CDS-E_fasciculatus_S2_contig822:5720..5933Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig822 5721..5933 -
1696842483.1803782-CDS-E_fasciculatus_S2_contig822:6783..69091696842483.1803782-CDS-E_fasciculatus_S2_contig822:6783..6909Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig822 6784..6909 -
1696842483.19185-CDS-E_fasciculatus_S2_contig822:7335..76471696842483.19185-CDS-E_fasciculatus_S2_contig822:7335..7647Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig822 7336..7647 -
1696842483.2028508-CDS-E_fasciculatus_S2_contig822:8088..81651696842483.2028508-CDS-E_fasciculatus_S2_contig822:8088..8165Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig822 8089..8165 -
1696842483.2140956-CDS-E_fasciculatus_S2_contig822:8901..94631696842483.2140956-CDS-E_fasciculatus_S2_contig822:8901..9463Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig822 8902..9463 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig822.16373.1

>prot_E_fasciculatus_S2_contig822.16373.1 ID=prot_E_fasciculatus_S2_contig822.16373.1|Name=mRNA_E_fasciculatus_S2_contig822.16373.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=497bp
MRNLEIGDWRGAFRFKDGVIPWDMSPSAERNDDIRAPDSMPAEWSKRSMP
DLVEWHNPCYSHGPSKKDPEDSLSEAVPRTAAAAAAAAASAAAAAAAAAA
AAATEEATDPPAQPAARYDGTCSGPAWTVALCALWGCRDIQGLKASLHVT
GRVVLDLLPWELSKAFVDYERAIKEKRANFTHIFTPSVENLVEAVAAKFK
HETTASLPLHVLQFVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEE
RFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDE
KGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVD
KGEKPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAV
EVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQKG
AVDEDGGEFRLGYASACRRRSNSVLLQCLTDAGFTTESTCFFCSVQ*
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mRNA from alignment at E_fasciculatus_S2_contig822:4974..9463-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig822.16373.1 ID=mRNA_E_fasciculatus_S2_contig822.16373.1|Name=mRNA_E_fasciculatus_S2_contig822.16373.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4490bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig822:4974..9463- (Ectocarpus fasciculatus EfasUO2)
ATGCGGAATCTGGAGATTGGTGACTGGCGCGGGGCATTTCGCTTCAAGGA TGGCGTCATCCCGTGGGATATGTCGCCATCGGCAGAACGAAACGACGATA TCCGTGCACCGGACAGCATGCCTGCCGAGTGGTCCAAGCGCAGCATGCCC GACCTCGTGGAGTGGCACAACCCCTGCTACTCGCATGGACCTTCGAAGAA AGACCCCGAGGATTCACTCTCAGAAGCTGTCCCTAGAACAGCAGCAGCAG CGGCAGCAGCAGCAGCGTCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCG GCGGCGGCAACGGAAGAGGCAACCGATCCTCCCGCTCAACCAGCAGCGAG ATATGATGGTACGTGCTCAGGTCCAGCTTGGACGGTCGCTTTGTGCGCCC TATGGGGGTGCCGCGACATCCAAGGTCTCAAAGCATCTCTCCACGTGACG GGAAGGGTTGTTCTGGACCTTCTCCCTTGGGAGCTTAGCAAGGCATTCGT CGACTACGAACGCGCGATCAAGGAGAAGCGGGCCAACTTCACACACATCT TTACACCATCAGGTGACAAGCATGGTCATGACATGTGATGTGTGTGTGAG CCCTACCGTGAGGGGTGTTCTCCAGCCCTTGGATCCAAGAAAAGGAACAT GGTTCAGCGTACTGCGTACGTGGAGCGCAGCGTTTCGTGTACACAGCAGA AAGCCACTATAACATGTAGTATTGATATCTCCGGCCACCTGAAACCGTAT GCACGTGGACACGCTGAGGGAAAAACTAATCAATCAGTAGTCTTTTATAG AATCCTCTTGAAAAATGTCGACAGCCTGCTCTCTTCTACCACTACCTTGC TAGCCGCGATAGTCCTACGACATGTATGTGTTATCGAACATCCTTCTGAG CGATTTTGAAAGAGAGAACAACTGCACGTAGAATGGGTGTATATTTGTAG TTCTAGAATATATCTTGTCGACAGCGTCAACCAGAAATAATGATCGTTGT CGCTACGTGAGCGTTACGGGTTCGAAAATACCTGGAATACTATACCTTCA CTTGGCCGACCATGCTGCTGTTGGGGCAGACGTGAAAGAAGCTAACAGTT CTCTGGAACCGTCGATCAATGATGCGTAAAAACCTTGGTTCTCGTAATAT TTTGAATTTGACACGAAGAGGTAAACATCGTTCGTTGTCGTTATCGTTTC TCTCTTTGCCTGTCTGTCTCCGTCTGCGTCTCTATCTCTGTCTCTCCCTC CATGCCTCTTCTCCCTCTCGGTTTCTCTCTATATATTCGACATGACAGTG GAAAATCTGGTCGAGGCAGTGGCAGCCAAATTCAAGCACGAAACGACGGC GAGTCTCCCTCTCCACGTGCTTCAGGTATGCGAGGCTAAATAACACCCCA CCGTGTAGCACTTCGGGGAGCCTTGGTATCTCAAAAAGTTCAAGTTCCAA AAGGGTACGGCATGCGACCTGTAGATTGTTCGCAGTGCTTTCGGGAAAAG GTTTGGACTGACGCAGTCTCGGAAGCACTACACAACAGCCATCCTGGTCA CCCTTCAGGATGTAGCATGTACCACGCACTTTTCTAACATAAGCATTGGG TATTGGCACAACAGCAGCAGCAGGTCTCTGACAGTACACATTGTCGTAGT TATTGCAGAACCAGGTCAGGTCAAAACCGCGCCACCACTAGCTACTTTTG AACACTAGAAAAAAAAACAGCGCGCTCAACAGGAAAAGGCAGCCACTACA ATGTACACAGACCAACTACCCCTTGCCGCCACCCCCGCCGACCATCACTG TTTGGTATTGTTTTAGTTCGTCCTAGGGTTCATCAGTTTGTCGGACAACG GCGTGCTGTGCACGGTGAGCCAGGATTTCCGGGAAGCCGCGGAGGGAGAT GGCCTGTGGCGCGAAGCGTACGAAGAACGATTTCCAGTTCAGATTGAAAT GTGCGAGAAGGGTGCTGGGCAAGGGGGTCCCGATGCTGGCGGCGGTGGTT GCGGTCCTGTCGATATCAGGGAAGCCGCTGCCACTAAGCCGACGGCAAGC GGAGGAAATTCATCTGCCAGTGATGAGAAGGGTGATGGCTTCAAAGGCCG CTACAAGAGGCGACTGCTGGACCCCCACGTGAGTCGTCGTCTTGGTGAAG TGAAACCGTCAAAACATGGAATAGTCGTCATATTATGGAATAGTCGAGGA GATCGTGGGCGTGGAGCACGTCGAGACGGGAAGGGTGCGGGAGGCGGATA AGGTGAAAGATCATGACGCCAATGTAAATCCTTGAGAACAAACTCCATCG GTGTGGGATCAAGTTACAGGGCGTTGGTCCCGTCGAGAGAGTCGGCAATA AATTATCATTGCGGTTTCTCTACGCTTGAGCAATAACCTTCACAAAAGAA GATAACCTTGGCAGTCTTTACTCTCTAAACAGACCTTGCAGCACCAAACC ATATCCGGACAAATAGCCTTATTTTTCTCACCTGGTTTTTCTTTGTTGTT GTCGACGGTACTGCTGCCGGTTCCACTTATCCTTTCGTCCAAATTCTTCG GCAGGTTGGCGATGAGGTGCAGGTGGCATGGAAAGGAAAGTTTCGGTTGG AGTCCTTGGAGGTGTACGACGGGACAGCCTGGTGGCTAGCCCGGGTCGTG GACAAGGGAGAAAAGCCCGGCTACTACAAGGTACGGTCGTTCCTGTTGTA TAAGGCCCCACAGCGCCAAGGGTGTGGGGGGCCCTATAGCGGGCGCCCGG CCCAACTCAGAGCATGAGGCACCTTGAATATCCGGCCTGAGTCACGATTC CTCACCCGGCTTGTACAGGGCAACCGGCCTTGTGTATGGGGCCATATACA AGGTGACCACTACATGGCATCTCTTGTAGGTGAACTTGGTCAAAAGCCGA TTTTATTATTTCAAATTACTGTGTTCGTTTGGTGAAATACAGCGAAGACT CACGGGCGCGAGGAATCTCCGCCACAAATGTGTGGACAGCGTGGGCGGCG TCCGTGTTTGCTAGGTTTCTCAGAACTCATTTCCCACGAAGGGTGTTCGA AAGTTCGAAAGACACGGGCACCCTACCGGTTGCCAAGTGAACAAACGCCT GGCGAAGATGTCCTGTGCGGCACTCGTACTCGAGTGTGTTCTCTCGTATC ATGACGAGAAAGCGTCGGTCCCCCCCCTGTTTCTGCAGATCAACACGAAG TGATGACGCGCGGTTGATTTTCCACAAACCGACAAACTCGCACAACCAGG CAAAGCAGATAAGAGGGGGAAAAGGCTTGAAACTGAGCGTTGATACACCG CCTAGGATCGTTGTTGAAAAGAAAACGCCTTACCGTCGTTGCCACCAAGT GTCTTATCGTGGATCCAATTGAAAAATGTGGCAACACATTGTGCGTAAGG CTCATGCCAGCAAGCAGAATTCTCCCCCCAAGGTGGCTTCCTTTCGCACA CCAAGCAGACAAAAACAAAGAACAAACCAAGCAGATGAGCCCTTCCTCTC TTTCCCCCTCCCCCCCCTATGACACCCAAGGTTCACTACCCAGGATGGGA GTCAAAGTGGGACGAGTGGGTGCTTCGCGACCGGCTGAGGTGGGGCAATG AGCGCCTTGCGGCACCCCTGAAAGGGACCCCTCTTCAAGCGGGGGACGCT GTCGAGGTGTGGTGCAAGGGCTTGCATGTGCCCGGCGCTTGGCTTGAGGC GGTGGTGCACGAGGTCGAGAAGGAGCGCGTTTATCTCGGGGAGGTGCGTT CGCACGGTCAAGGGGGAATCAGCCGGGTGGGGTTGCTTTGGGGAAGTGCT GTTTCTTGGTATTTGAAAGGGGTTCGCCATTCGTGTGCCAAAGTGATTCG TGCGGTATTAATTTTATTCTGGAAAGCTTCCTCGCCCAACCCTCGTCTCC CTCACCTTCCCATTCGCTTGTTTGCTTCACCTGCGGTTCTTGACGCCCCT GTCGATCTTGCGATTGAACAGCTCCGCTTCGGGGTGTCAGCCAGTGAAAT CCCTTAGGGTGCATGCCTACTGCACAACCCGCCCCCGAAATGTATTCATG AACAAACAGCTTCCTAAGCGCGAAAAAAGGCGCAACTTGAACCCTCAACC TAGCCGCTAGAACAAATCGAGGTCACCAACTGTTGTAGGCCATGTGTCTG TCTGTCTATGGCCGAACCATCTTACATTGCATGCTTTCCTCTCTTTACCT CGTACAGTCACTGTACGCCACTGGTTTTGACTCCCTCGGCGGAACCCCTC AACCCCCCTCCCCCCCTTTCGTATCGAACGACCCAGCAGGTGCTTACATC CGGCCATTTCTGGGCGAAGACGGAGCACGTGCGGCTGATCCAAAAGGGTG CCGTCGACGAGGATGGGGGAGAGTTTCGGCTAGGCTACGCGTCAGCGTGC CGCAGAAGAAGCAACAGCGTTCTTCTCCAATGCCTGACTGACGCTGGTTT CACCACCGAGAGCACATGCTTCTTCTGCTCCGTACAGTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig822:4974..9463-

>mRNA_E_fasciculatus_S2_contig822.16373.1 ID=mRNA_E_fasciculatus_S2_contig822.16373.1|Name=mRNA_E_fasciculatus_S2_contig822.16373.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1491bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig822:4974..9463- (Ectocarpus fasciculatus EfasUO2)
ATGCGGAATCTGGAGATTGGTGACTGGCGCGGGGCATTTCGCTTCAAGGA
TGGCGTCATCCCGTGGGATATGTCGCCATCGGCAGAACGAAACGACGATA
TCCGTGCACCGGACAGCATGCCTGCCGAGTGGTCCAAGCGCAGCATGCCC
GACCTCGTGGAGTGGCACAACCCCTGCTACTCGCATGGACCTTCGAAGAA
AGACCCCGAGGATTCACTCTCAGAAGCTGTCCCTAGAACAGCAGCAGCAG
CGGCAGCAGCAGCAGCGTCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCG
GCGGCGGCAACGGAAGAGGCAACCGATCCTCCCGCTCAACCAGCAGCGAG
ATATGATGGTACGTGCTCAGGTCCAGCTTGGACGGTCGCTTTGTGCGCCC
TATGGGGGTGCCGCGACATCCAAGGTCTCAAAGCATCTCTCCACGTGACG
GGAAGGGTTGTTCTGGACCTTCTCCCTTGGGAGCTTAGCAAGGCATTCGT
CGACTACGAACGCGCGATCAAGGAGAAGCGGGCCAACTTCACACACATCT
TTACACCATCAGTGGAAAATCTGGTCGAGGCAGTGGCAGCCAAATTCAAG
CACGAAACGACGGCGAGTCTCCCTCTCCACGTGCTTCAGTTCGTCCTAGG
GTTCATCAGTTTGTCGGACAACGGCGTGCTGTGCACGGTGAGCCAGGATT
TCCGGGAAGCCGCGGAGGGAGATGGCCTGTGGCGCGAAGCGTACGAAGAA
CGATTTCCAGTTCAGATTGAAATGTGCGAGAAGGGTGCTGGGCAAGGGGG
TCCCGATGCTGGCGGCGGTGGTTGCGGTCCTGTCGATATCAGGGAAGCCG
CTGCCACTAAGCCGACGGCAAGCGGAGGAAATTCATCTGCCAGTGATGAG
AAGGGTGATGGCTTCAAAGGCCGCTACAAGAGGCGACTGCTGGACCCCCA
CGTTGGCGATGAGGTGCAGGTGGCATGGAAAGGAAAGTTTCGGTTGGAGT
CCTTGGAGGTGTACGACGGGACAGCCTGGTGGCTAGCCCGGGTCGTGGAC
AAGGGAGAAAAGCCCGGCTACTACAAGGTTCACTACCCAGGATGGGAGTC
AAAGTGGGACGAGTGGGTGCTTCGCGACCGGCTGAGGTGGGGCAATGAGC
GCCTTGCGGCACCCCTGAAAGGGACCCCTCTTCAAGCGGGGGACGCTGTC
GAGGTGTGGTGCAAGGGCTTGCATGTGCCCGGCGCTTGGCTTGAGGCGGT
GGTGCACGAGGTCGAGAAGGAGCGCGTTTATCTCGGGGAGGTGCTTACAT
CCGGCCATTTCTGGGCGAAGACGGAGCACGTGCGGCTGATCCAAAAGGGT
GCCGTCGACGAGGATGGGGGAGAGTTTCGGCTAGGCTACGCGTCAGCGTG
CCGCAGAAGAAGCAACAGCGTTCTTCTCCAATGCCTGACTGACGCTGGTT
TCACCACCGAGAGCACATGCTTCTTCTGCTCCGTACAGTGA
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