mRNA_E_fasciculatus_S2_contig82.16351.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig82.16351.1
Unique NamemRNA_E_fasciculatus_S2_contig82.16351.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16351.1 vs.
Match: Sld5 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW2_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 2.830e-126
Identity = 181/188 (96.28%), Postives = 183/188 (97.34%), Query Frame = 3 
Query:   63 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLAEGGGLDQ 626
            MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVL+DCGEIMTDHGSVKLDRGTTHLLRRSDVEHL   G L +
Sbjct:    1 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQE 188
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16351.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV1_9STRA)

HSP 1 Score: 218 bits (556), Expect = 5.140e-67
Identity = 103/190 (54.21%), Postives = 137/190 (72.11%), Query Frame = 3 
Query:   63 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTL--GGRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLAEGGGLDQ 626
            MNFG + K+LL ELKRS+WLP YNE  V+ +L EI   + EL  T   G R  ++IPD  KV +VVHHQAL+RNKR LL Y  +R +++  LRWETGPVVP+ LQ +LS  E E F+ YD +++ + +G+ +DLT D QPPKEL +EVR L DCGEIMT+ G++ L++G+THLLRR D E+L + G L+Q
Sbjct:    1 MNFGGRGKELLQELKRSEWLPNYNEKTVKDILKEIDLYWQELCATFDNGNRGNNEIPDAAKVGIVVHHQALMRNKRILLAYHMYRLEKLKALRWETGPVVPEHLQGALSGSEREFFSRYDSLVSGYCEGVGIDLTQDQQPPKELFIEVRALEDCGEIMTEQGTINLEKGSTHLLRRCDAENLIKQGMLEQ 190
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16351.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIC8_9STRA)

HSP 1 Score: 208 bits (529), Expect = 6.360e-63
Identity = 98/186 (52.69%), Postives = 133/186 (71.51%), Query Frame = 3 
Query:   72 GAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGG-RTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLAEGGGLDQ 626
            G K+K LL EL++ DW+PP+NEDGVR +L EIQAL  E++DTL   R   ++P  VK+ + VHH  L  N+RCLL Y+++RA++ + LRW+TGPVVP  L  +LSA E + FN YDR+LT++ Q   LDLTAD +PP+EL+VEVR L D  ++ TD G V+L +G  +LLR +DVEHL   G L+Q
Sbjct:    5 GTKAKRLLQELRQGDWMPPFNEDGVRAILQEIQALDQEISDTLASSRQGEEMPIQVKIGMAVHHAGLTHNRRCLLAYVRYRAEKASALRWDTGPVVPDSLAPNLSAAEQDFFNKYDRLLTDYQQDFGLDLTADARPPRELYVEVRSLTDDMDVFTDSGLVRLKKGARYLLRHTDVEHLVRQGMLEQ 190
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16351.1 vs.
Match: Sld5 (domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A3R7MJX0_9STRA)

HSP 1 Score: 197 bits (502), Expect = 6.390e-59
Identity = 100/190 (52.63%), Postives = 130/190 (68.42%), Query Frame = 3 
Query:   63 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTS--DIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLAEGGGLDQ 626
            M   AK K+LL EL+RSDWLPPYNED VR V+ E   L++E+   L     +  + P  V   L+V+HQ LLRNKRCL+ YL  R ++I  LRWETG ++P  L Q+L  REM+LFN YD++LT++     LDL+ADL+PPK+L+VEVRVL DCGE+MT+ G V L+  + H LRR DVE L   G L+Q
Sbjct:    1 MALNAKGKELLRELQRSDWLPPYNEDLVRQVVDESGLLHEEIVRKLNTFKDNFEEQPASVHCGLIVNHQCLLRNKRCLIAYLYHRVEKIKALRWETGTIIPAPLAQNLCQREMQLFNAYDQLLTDYMADFELDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQ 190
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16351.1 vs.
Match: Sld5 (domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZC9_PHYSP)

HSP 1 Score: 197 bits (501), Expect = 8.210e-59
Identity = 101/188 (53.72%), Postives = 129/188 (68.62%), Query Frame = 3 
Query:   63 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLAEGGGLDQ 626
            M   AK K+LL EL+RSDWLPPYNED VR V+ E   L++EL   L       +P  V+ +LVV HQ LLRNKRCLL YL  R ++I  LRWETG ++P  L Q+L  RE++ FN YD++LT++     LDL+ADL+PPK+L+VEVRVL DCGE+MT+ G V L+  + H LRR DVE L   G L+Q
Sbjct:    1 MALNAKGKELLRELQRSDWLPPYNEDLVRQVVEESGLLHEELNRKLE-TFKEGMPKSVECALVVSHQGLLRNKRCLLAYLHHRMEKIKALRWETGTIIPGPLAQNLCQREVQFFNQYDQMLTDYMADFELDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQ 187
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16351.1 vs.
Match: DNA (replication complex GINS protein PSF1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNH7_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.190e-57
Identity = 99/193 (51.30%), Postives = 134/193 (69.43%), Query Frame = 3 
Query:   63 MNFGAKSKDLLVELKRSDWLPPYN----EDGVRGVLAEIQALYDELTDTLGGRTTSDIPDPVK-VSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLAEGGGLDQ 626
            + +GAK ++LL+ELKRS+WLP YN    +DGVR VL EI ALY  +   +    + D+ +P     L+V+H + LRNKRCLL YLK+RAD I  LRW+ G  +P++L++ L A E + F+ YD IL+++ + ++LDL AD++PPK L+VEVRVL DCGEI T  G V L + TTH LRRSDVEHL   G L+Q
Sbjct:    5 LPYGAKGRELLLELKRSEWLPAYNGKRQDDGVRQVLGEIDALYKRMRSRMA--ESRDMREPFYGCPLMVYHASTLRNKRCLLAYLKYRADLIGNLRWDAGSAIPEDLRRKLCAEEAQYFSAYDNILSDYMREVDLDLAADMEPPKNLYVEVRVLRDCGEIDTVSGPVVLAKDTTHNLRRSDVEHLIRQGALEQ 195
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16351.1 vs.
Match: DNA (replication complex GINS protein PSF1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VV97_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.110e-56
Identity = 97/191 (50.79%), Postives = 130/191 (68.06%), Query Frame = 3 
Query:   63 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDI---PDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLAEGGGLDQ 626
            M   AK K+LL EL+RSDWLPPYNED VR V+ E   L++E++  +     +D+   P  V   LVV+HQ LLRNKRCL+ Y+  R ++I  LRWETG ++P  L Q+L   E++ FN YD++LT++     LDLTAD++PPK+L+VEVRVL DCGE+MT+ G V L+  + H LRR DVE L   G L+Q
Sbjct:    1 MALNAKGKELLRELQRSDWLPPYNEDLVRRVVEESGLLHEEISKKMS--MYADLVNEPASVHCGLVVNHQCLLRNKRCLIAYVHHRMEKIKALRWETGTIIPASLAQNLCQGEVQFFNQYDQLLTDYMADFELDLTADIKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQ 189
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16351.1 vs.
Match: Sld5 (domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X6H6_GLOUD)

HSP 1 Score: 191 bits (486), Expect = 1.560e-56
Identity = 96/193 (49.74%), Postives = 131/193 (67.88%), Query Frame = 3 
Query:   63 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLG--GRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLAEGGGLDQPNH 635
            M   AK K+LL EL+RSDWLPPYN++ VR V+ E+ +L++++ + L   G      P  V   L+V HQ LLRNKRCLL YL  R ++I  LRWETG ++P  L  +L  RE++ F +YD++LT++     +DL+AD +PPK+L+VEVRVL DCGEIMT++G V L+  +TH LRR DVE L   G L+Q  H
Sbjct:    1 MALCAKGKELLRELQRSDWLPPYNDELVRQVVEEVGSLHEQIMEKLRVFGDEIEQQPS-VHCGLIVSHQCLLRNKRCLLAYLYERTEKIKNLRWETGTIIPASLAPNLCQREVQFFQSYDQLLTDYMADFEIDLSADTKPPKDLYVEVRVLRDCGEIMTENGLVNLEANSTHFLRRVDVEQLIRQGLLEQIKH 192
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16351.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9Q6_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.950e-56
Identity = 91/188 (48.40%), Postives = 136/188 (72.34%), Query Frame = 3 
Query:   69 FGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLG--GRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLAEGGGLDQ 626
            +G+K+K LL+EL+RSDWLP YN++ +R V+ EI AL+ EL DTL   G   +D+   V   ++V H+++LRNKRC+L YL+ R ++I  +RWETG ++P   ++ +SA+E++  + YD+++T + + + +D+TADL+PPK+L VEV+VL DCGEI TD G V LD+ + H LRRSDVEHL   G + Q
Sbjct:    8 YGSKAKALLMELQRSDWLPSYNDEAIRQVVEEINALHAELVDTLEREGFEVADVA--VACGMLVQHESMLRNKRCVLAYLQARLEKIQAMRWETGAMIPPHCKRQMSAKEVDFAHQYDKLVTAYVRDVKIDITADLEPPKDLLVEVQVLKDCGEIWTDSGPVTLDKHSRHFLRRSDVEHLIRQGMVRQ 193
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16351.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CID8_PYTOL)

HSP 1 Score: 190 bits (482), Expect = 6.020e-56
Identity = 96/191 (50.26%), Postives = 132/191 (69.11%), Query Frame = 3 
Query:   63 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDIPDP---VKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLAEGGGLDQ 626
            M   AK K+LL +L+RSDWLPPYN++ VR V+ E+  L++++ + L  RT  D  +    V   L+V HQ LLRNKRC+L YL  R+++I  LRWETG ++P  L  +L+ RE++ FN YD++LT++     LDLTAD +PPK+L+VEVRVL  CGEIMT++G V L+  +TH LRR DVE L   G L+Q
Sbjct:    1 MALCAKGKELLRDLQRSDWLPPYNDELVRQVVEEVGVLHEQILEKL--RTFGDDIEQHQSVHCGLIVSHQCLLRNKRCVLAYLYERSEKIKNLRWETGTIIPATLAPNLNQREVQFFNAYDQLLTDYMADFELDLTADAKPPKDLYVEVRVLKGCGEIMTENGLVNLEVNSTHFLRRVDVEQLIRQGFLEQ 189
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig82.16351.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Sld52.830e-12696.28domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical5.140e-6754.21protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Uncharacterized6.360e-6352.69protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Sld56.390e-5952.63domain-containing protein n=5 Tax=Phytophthora Tax... [more]
Sld58.210e-5953.72domain-containing protein n=1 Tax=Phytophthora soj... [more]
DNA1.190e-5751.30replication complex GINS protein PSF1 n=1 Tax=Hond... [more]
DNA1.110e-5650.79replication complex GINS protein PSF1 n=1 Tax=Phyt... [more]
Sld51.560e-5649.74domain-containing protein n=2 Tax=Pythiaceae TaxID... [more]
Hypothetical1.950e-5648.40protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486... [more]
Uncharacterized6.020e-5650.26protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig82contigE_fasciculatus_S2_contig82:20594..24009 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score370.5
Seed ortholog evalue4.9e-100
Seed eggNOG ortholog2880.D7FKW2
Preferred nameGINS1
Model size1063
KEGG koko:K03232,ko:K10732
KEGG ModuleM00286
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000724,GO:0000725,GO:0000727,GO:0000811,GO:0001701,GO:0001824,GO:0001832,GO:0001833,GO:0003674,GO:0003678,GO:0003774,GO:0003777,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005737,GO:0005856,GO:0005871,GO:0005875,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006271,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007275,GO:0007346,GO:0008150,GO:0008152,GO:0008283,GO:0008574,GO:0009058,GO:0009059,GO:0009790,GO:0009792,GO:0009987,GO:0010564,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022607,GO:0022616,GO:0031261,GO:0031298,GO:0031974,GO:0031981,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0034641,GO:0034645,GO:0040007,GO:0042623,GO:0043009,GO:0043138,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044786,GO:0045787,GO:0045931,GO:0046483,GO:0048285,GO:0048518,GO:0048522,GO:0048589,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051225,GO:0051276,GO:0051716,GO:0051726,GO:0065007,GO:0070013,GO:0070925,GO:0071103,GO:0071162,GO:0071704,GO:0071840,GO:0090068,GO:0090304,GO:0090307,GO:0140014,GO:0140097,GO:1900087,GO:1901360,GO:1901576,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902292,GO:1902296,GO:1902315,GO:1902319,GO:1902806,GO:1902808,GO:1902850,GO:1902969,GO:1902975,GO:1902983,GO:1903047,GO:1990939,GO:2000045
Exons6
EggNOG free text desc.DNA strand elongation involved in nuclear cell cycle DNA replication
EggNOG OGsCOG5230@1,KOG3303@2759
Ec32 ortholog descriptionGINS complex
Ec32 orthologEc-17_001580.1
Cds size609
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko03012,ko03032
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig82.16351.1prot_E_fasciculatus_S2_contig82.16351.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig82 20986..23947 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842481.1125412-UTR-E_fasciculatus_S2_contig82:20593..209851696842481.1125412-UTR-E_fasciculatus_S2_contig82:20593..20985Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig82 20594..20985 -
1696842481.2026885-UTR-E_fasciculatus_S2_contig82:23947..240091696842481.2026885-UTR-E_fasciculatus_S2_contig82:23947..24009Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig82 23948..24009 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842481.126141-CDS-E_fasciculatus_S2_contig82:20985..210541696842481.126141-CDS-E_fasciculatus_S2_contig82:20985..21054Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 20986..21054 -
1696842481.1435728-CDS-E_fasciculatus_S2_contig82:21353..214161696842481.1435728-CDS-E_fasciculatus_S2_contig82:21353..21416Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 21354..21416 -
1696842481.15957-CDS-E_fasciculatus_S2_contig82:21577..216761696842481.15957-CDS-E_fasciculatus_S2_contig82:21577..21676Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 21578..21676 -
1696842481.1705441-CDS-E_fasciculatus_S2_contig82:22810..229311696842481.1705441-CDS-E_fasciculatus_S2_contig82:22810..22931Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 22811..22931 -
1696842481.1814148-CDS-E_fasciculatus_S2_contig82:23477..235811696842481.1814148-CDS-E_fasciculatus_S2_contig82:23477..23581Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 23478..23581 -
1696842481.1923-CDS-E_fasciculatus_S2_contig82:23794..239471696842481.1923-CDS-E_fasciculatus_S2_contig82:23794..23947Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 23795..23947 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig82.16351.1

>prot_E_fasciculatus_S2_contig82.16351.1 ID=prot_E_fasciculatus_S2_contig82.16351.1|Name=mRNA_E_fasciculatus_S2_contig82.16351.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=203bp
MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRT
TSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQ
ELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLN
DCGEIMTDHGSVKLDRGTTHLLRRSDVEHLAEGGGLDQPNHMSRLRMSGL
IG*
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mRNA from alignment at E_fasciculatus_S2_contig82:20594..24009-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig82.16351.1 ID=mRNA_E_fasciculatus_S2_contig82.16351.1|Name=mRNA_E_fasciculatus_S2_contig82.16351.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3416bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig82:20594..24009- (Ectocarpus fasciculatus EfasUO2)
GTTCAGCATTCGGTGTTCGGTGTCTATTGCACCTACGCGGCGTACTGCAG
TGAGCTCCAGCCATGAACTTCGGTGCAAAAAGCAAAGATCTGCTTGTAGA
GTTGAAGAGAAGCGATTGGTTGCCGCCTTACAATGAAGACGGCGTTCGCG
GCGTGTTGGCTGAGATTCAGGCTCTCTACGACGAACTCACGGATACTCTT
GGAGGTAGAACAACGGTGAGGTCATGGATTCGTGTATGAGACTGGACAAC
TCGCTCTGTATCGGCTGCTGGCTGCTGTTTTGACACCCGCTGTATTACTG
AACGGTGCCAATGGCACGTTCGTACATTCTTCTTTGTACCAACACCTTCT
TTTACGATATGGCTGAGATGGTTTGAACTTGAAGCAAGCACCCGTTTGCC
TGCCTGCTCTCTACCCCGCGCGTCACAGAGTGACATACCAGATCCCGTCA
AGGTCAGCCTCGTGGTCCACCATCAAGCGCTCCTCCGTAATAAACGTTGC
CTTCTTACATACCTCAAGTGGAGAGCAGACAGGTATGCACACGCGTGGGA
ACTTGTGTGTTCTTTAGTGTTTCTCGTGGTTTTTGTCGCCGAGCAAATTT
TCAAATTTTCAAATTTTATTTTTGCAACAAGCCAACCCGGCGCCTCCGCG
CTGTTGATATGACGTGCTCAATCAACAACCACCGCTATCATCCCTCACAT
TCTGTATTCCTTCTGCTGTGAGCCGAAGAGGTAACACTTCGGAAGCCAGG
CTTGTAAGGGGAAGGGCTGGTGTCGTCGGTGACAACCTGCGAGAACAACG
GTAGCCACGCGACGGGGAGTTTGTCGAACTCAGATGGCGAGATACTCAAG
AGCACGTGTCTAGAAGCACACGAATGTTGAGAAACCCGCGGAAGGAAGTG
TTGGTGTTGGTGCAGTGGAGGATGGAACCCTTATTATGTTGGGAGCATGC
GAAGCGTTAAAAAAAACAGTGGATTTTCTCATGGATGGGTATCTTCTTAG
AGGTACAACTTAATCACAAGCTTGTTGATGTCCGTTGCTGGTTTGCATCG
CCCTCTCGATAATCCCCTATGTACACAGAATCACCCAATTACGGTGGGAA
ACAGGACCTGTTGTTCCACAAGAACTGCAGCAAAGCTTGAGCGCCAGAGA
GATGGAGTTGTTCAACACGTACGATCGAATTCTTACGAACTTCACACAGG
TGGGTATGTTTTCTTCTCTTGTCTTACGAGTATGTGTTGATCATGCTGTT
TTATCAAGGATACGATTGTTGTGTACGCGGCACGATGCGCACACCTAAAG
TGAACATGCCTTTGTAGTTGGCCATCTCCCAAGCAAACGCTGGCATTAGC
ATTCCGCATGTGCGAGCTGGCCCCGAAAGGTGCTCGTATTGGTGCTCAGC
GTCCGAAACCCGAAATCGCGGCAGATACATGACAAGTACAAGGGGATCCC
GCGGTGGAGAACGGGTCTCCTCACCCATTAGCCTACCACCTTCGGAGCTC
GGTTACTGCGACAGATCGTTTTTCTAGCTCAGTTTTTTAAAAGAAAGATA
CAAGTACAAACACAGAAAGACTACCTGTTCGAGAAAAAGTCACAATCGAA
GGAAATGTGTTGAAGTCTTTGCAATGAATGGCAAGAAACCGGCTGGGTAC
TGGGCTTATATTGAGTCTTTTTTAAGCCTTACACTGATTATTTGTATTTT
CAGTGATACCAGTAGGTGCTAAGCACAGAAGCGAAAAATATTTTATTAAA
TTAAAAATACCTTGTCACACGTTCACATCTAATCTGCTGTCTGTCGTACA
TTTTGAATTTCAAACGTACATGCAGTTGGAGCAGCTGTTGTTGTTTTCCC
GCTCATTTTGAAATTTACAACATTTACAAACGAACGAGATTTGATCTCCT
TGCTGTGCGATGAGTGTAATAATGAGACGTAATCGAGTCCTTGATATGGG
AGGAGTGTGATGGCAGATGGAGAGTAATCTTGGTTGTTGAGTGGGAAAGG
AGCAAAAGAAGGGGCAAGGTCGAGGTAAGGCGTTTGGAACAGATCAGAGC
AGCAGTAGTTATGCAACACAATAGAAAAACATCCGTAGCAGCATTGGCGA
AGACTTTCCTGTGTTTTTCATAGCCATGTTGGGGAGCATCCGTTGAGGAA
GACAGCAACAGCAGAGGTTTTTTGTTCTATGTCGTTGCAATATTTTCCGG
GCAGGCTTTCGCTAAGGATTCCACGTGATTTTTTTTGGCATTTCCGCTCT
GCAAACTTTGAAAGGCCGTGACTAAAGATTGCATGCACCCAACCTGAAGG
AGCTCCTGTGACCGGTTTACTCTCTTCTCGCAGGGTCTGAACTTGGATCT
CACAGCAGATCTTCAACCGCCGAAGGAGTTGCACGTGGAGGTCAGGGTCC
TGAACGACTGCGGGGAAATAATGACAGATCACGTGAGATCCCCATGTTTC
CTCTTTGAAGAGCGACGTAGTTGTGTGAAGCAACGCCCATTCCGCGAGGA
AGGTGGCGTGTGGCAGAGCTGTGCTACGATACGATGCTGTACAAGGTAGT
CACCCATGCATTGCTCGTGTCACACTTTTTTTTTTTTGTGCAGGGATCTG
TGAAGCTTGACCGTGGAACTACCCACCTGTTGCGGCGATCTGACGTGGAA
CATCTGGTACGCCAAGGTCTACTCCAAGAGCTAGAGAACGAGTCGACCTA
GCTTCGTTTTCCCTTTGTTTGCAGTGGTGACATACGTTGTCGGCTGCTGC
CGTGGTACCTGAGTCAGGTACACTGCGTGGAGTTCAGGGGCATTGTTTGG
ACGATATTCTGCAAAACGGTCTACATGTAATTGGTGTTCGTTGGAGGAGC
TAACCTCCGCCACTCAGTCAGTGAGCCCATCTAACGAACAATCGGTCTGC
TGGGAGTTCGGATCTCACCGGATGTGTCATCGATTGTTTCACCCTCGAAT
GACAGGCGGAGGGTGGAGGGTTGGACCAGCCCAACCACATGAGCCGGCTC
AGAATGAGTGGTCTAATAGGTTAGCCGATATAACGCACAAGCAAGGCGTA
TGCCAGAAGGTCGAACTTCACCGGGTGTGTCGCGGATTGTTTTCCCTGAG
ACAGATCTCGTTAGATGGAGCTGGCAGGCGGGGGATTGGGCCCGCAACTA
CGATGAGCCGGCTCAGTCAGCAGCGTTTGGAGCGCGGGGAGGTACAGGCG
GGTAGAACCCTCAGAAGCCACCCACTGCACACCTAGCGCCTAGTAAGATG
GGATCGAATCCCAACCAGCTTACGTTTTCCGTTAGATGGGCTAACCTGTT
AGGCTACTCAGTAAGCCGAACAGCAGCCCGCGCCTCCTCGAACACTCATT
ATTCGACGGGGAAAAGAAGAGAGTGGAAGTCCGAAAGCCTGGAGGAAACC
TTTGGCCTGCCGTGCC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig82:20594..24009-

>mRNA_E_fasciculatus_S2_contig82.16351.1 ID=mRNA_E_fasciculatus_S2_contig82.16351.1|Name=mRNA_E_fasciculatus_S2_contig82.16351.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=609bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig82:20594..24009- (Ectocarpus fasciculatus EfasUO2)
ATGAACTTCGGTGCAAAAAGCAAAGATCTGCTTGTAGAGTTGAAGAGAAG
CGATTGGTTGCCGCCTTACAATGAAGACGGCGTTCGCGGCGTGTTGGCTG
AGATTCAGGCTCTCTACGACGAACTCACGGATACTCTTGGAGGTAGAACA
ACGAGTGACATACCAGATCCCGTCAAGGTCAGCCTCGTGGTCCACCATCA
AGCGCTCCTCCGTAATAAACGTTGCCTTCTTACATACCTCAAGTGGAGAG
CAGACAGAATCACCCAATTACGGTGGGAAACAGGACCTGTTGTTCCACAA
GAACTGCAGCAAAGCTTGAGCGCCAGAGAGATGGAGTTGTTCAACACGTA
CGATCGAATTCTTACGAACTTCACACAGGGTCTGAACTTGGATCTCACAG
CAGATCTTCAACCGCCGAAGGAGTTGCACGTGGAGGTCAGGGTCCTGAAC
GACTGCGGGGAAATAATGACAGATCACGGATCTGTGAAGCTTGACCGTGG
AACTACCCACCTGTTGCGGCGATCTGACGTGGAACATCTGGCGGAGGGTG
GAGGGTTGGACCAGCCCAACCACATGAGCCGGCTCAGAATGAGTGGTCTA
ATAGGTTAG
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