mRNA_E_fasciculatus_S2_contig8184.16334.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8184.16334.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI) HSP 1 Score: 698 bits (1801), Expect = 1.990e-238 Identity = 406/458 (88.65%), Postives = 422/458 (92.14%), Query Frame = 1
Query: 1 VLDESHTIAASNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAANALTQGETVAFLRRVLLRHSQGMKLGGHSILGLPNITHKVEVLTLPSKERKAYVEFEQGVQNDYVKVRHRLRTQRGSHTMEVLTLLSKFRQACSGGQLVVGASXXXXXXXSTPATLDAFCSVCNEMIESPVRTRCGHTFCQACISSVLTKKEDDEGPCPKCKTTVRLAELTSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SSPGTGVVMETKLKALVEKLAGIHAKDPSSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGNMSRTQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARHVTVTKLVLKDSIETRILALQKKQAAQGSASAAVGAPSSSSSNG 1362
VLDESHTIA+SNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKA TQGETVAFLRRVLLRHSQGMKLGGHSILGLP IT+KVEVLTL SKERKAYV+FEQGVQNDY+KVRHRLRTQ+GSHTMEVLTLLSKFRQACSGGQLVVGAS STPATLDAFCS+CNE++E+PVRTRCGHTFCQACISSVLTK +DDEGPCP+CKT VRL +LTSVGG XXXXXXXX XXXXXXXXXXXXXXXXXXX XXX SSPG GVVMETKLKALVEKLAGIHAKDP+SKSLVFSQFNSSLEWLKRTLPK+GFQFRTLTGNMSRTQRTAALTAFA DPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQ R VTVTKLVLKDSIETRILALQKKQA +GSASAAVGAPSSSSS+G
Sbjct: 805 VLDESHTIASSNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAPRRETQGETVAFLRRVLLRHSQGMKLGGHSILGLPTITNKVEVLTLSSKERKAYVDFEQGVQNDYIKVRHRLRTQKGSHTMEVLTLLSKFRQACSGGQLVVGASAAGGGG-STPATLDAFCSMCNEILEAPVRTRCGHTFCQACISSVLTKSKDDEGPCPRCKTAVRLTDLTSVGGGSVATGXXXXXXXXKPEYXXXXXXXXXXXXXXXXXXXPXXXHSHSSSPGAGVVMETKLKALVEKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGNMSRTQRTAALTAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQTRPVTVTKLVLKDSIETRILALQKKQATEGSASAAVGAPSSSSSDG 1261
BLAST of mRNA_E_fasciculatus_S2_contig8184.16334.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE) HSP 1 Score: 633 bits (1632), Expect = 2.080e-212 Identity = 383/457 (83.81%), Postives = 410/457 (89.72%), Query Frame = 1
Query: 1 VLDESHTIAASNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAANALTQGETVAFLRRVLLRHSQGMKLGGHSILGLPNITHKVEVLTLPSKERKAYVEFEQGVQNDYVKVRHRLRTQRGSHTMEVLTLLSKFRQACSGGQLVVG--ASXXXXXXXSTPATLDAFCSVCNEMIESPVRTRCGHTFCQACISSVLTKKEDDEGPCPKCKTTVRLAELTSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------SSPGTGVVMETKLKALVEKLAGIHAKDPSSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGNMSRTQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARHVTVTKLVLKDSIETRILALQKKQAAQGSASAAVGAPS 1344
VLDESHTIA + T V+ +VSNRRWCMTGTPYISRFSD NGQL+F+GA GAFRG SDLGDK N TQ ETVAFLRRVL RHSQGMKLGG SILGLP+ITHKVEVL LP+KERKAYV+FE+G+QNDY+ VRHRLRTQ+GSHTMEVLTLLSKFRQACSGGQL+VG A+ TPA++DAFC +CN++IESPVRT+CGH FCQACISSVLTKKEDD+GPCPKCK TVRL +LT VGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SSPGTGVVMETKLKALVE LAGIHAKDP+SKSLVFSQFNSSLEWLKRTLPK+GFQFRTLTG+MSRTQRTAALTAFA DPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQA+GRVYRLGQ R VTVTKLVLKDSIETRILALQKKQA +GSASAAVGA S
Sbjct: 836 VLDESHTIATAKHATNEVRDIVSNRRWCMTGTPYISRFSDANGQLSFVGAGGAFRG-SDLGDKGPNRETQVETVAFLRRVLFRHSQGMKLGGKSILGLPSITHKVEVLALPTKERKAYVDFEKGLQNDYIMVRHRLRTQKGSHTMEVLTLLSKFRQACSGGQLLVGDSATVGYDGEGPTPASVDAFCPICNDIIESPVRTKCGHIFCQACISSVLTKKEDDQGPCPKCKKTVRLDDLTHVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGTGVVMETKLKALVEMLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMSRTQRTAALTAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQTRPVTVTKLVLKDSIETRILALQKKQATEGSASAAVGAGS 1291
BLAST of mRNA_E_fasciculatus_S2_contig8184.16334.1 vs.
Match: SNF2 (family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG4_9STRA) HSP 1 Score: 337 bits (865), Expect = 4.960e-100 Identity = 218/464 (46.98%), Postives = 289/464 (62.28%), Query Frame = 1
Query: 1 VLDESHTIAASNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGD-----------KAANALTQGETVAFLRRVLLRHSQGMKLGGHSILGLPNITHKVEVLTLPSKERKAYVEFEQGVQNDYVKVRHRLRTQRGSHTMEVLTLLSKFRQACSGGQLVVGASXXXXXXXSTPAT--LDAFCSVCNEMIESPVRTRCGHTFCQACISSVLTKKEDDEGPCPKCKTTVRLAELTSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGT---------GVVMETKLKALVEKLAGIHAKDPSSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGNMSRTQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARHVTVTKLVLKDSIETRILALQ---KKQAAQGS 1317
VLDESHTI +N + V T++SNRRW ++GTP S D+ GQL L D+G+ ++N ++ + + FLR +++RH+Q L G ILGLP I + ++ ER AYV+ E+ +Q+ Y VR+ LR+ +GSH+M+VLTL+S++RQACSGG ++ A+ +DA C +CNE++++P T C H FC CI++ +TKK D +G CPKCK V L + VG XXXXXXXX XXXXXXXXX GVVME+KLK LV LA I KD ++K+LVFSQF S+L +L+R LP+ GF+FRTLTG+MSR QRT AL F +DPPTT+FLLSVRSGA GINLT A++VF+LEP LNLALE QAIGRV+RLGQ R V V KL ++ S+E+RI+A+Q +AAQGS
Sbjct: 1038 VLDESHTIKTTNRLSAAVATIISNRRWLVSGTPANSNLGDLTGQLKNL----------DIGNLRSALAPLRYADSSNEISVRQALPFLRSIMMRHTQAQTLNGRHILGLPPINKEAVLVKWAPHERTAYVKLEKELQSQYKSVRYLLRSAKGSHSMKVLTLMSQYRQACSGGAIINSAALAEAAAAGGQGATVMDALCPICNELLDTPAITTCNHVFCHLCITAHVTKKAD-KGTCPKCKKVVSLESIQLVGAGAXXXXXXXXEGSAATAGGGAPMGPNAGGVQGXXXXXXXXXXXXXXXXXDAPQQGGVVMESKLKVLVGMLAAIRGKDANAKALVFSQFTSTLRYLQRELPRHGFEFRTLTGDMSRRQRTKALEDFRSDPPTTIFLLSVRSGACGINLTAASHVFMLEPCLNLALEAQAIGRVHRLGQTRAVHVVKLYMEASVESRIIAMQTAKSDRAAQGS 1490
BLAST of mRNA_E_fasciculatus_S2_contig8184.16334.1 vs.
Match: Helicase (ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T2_ECTSI) HSP 1 Score: 317 bits (812), Expect = 4.520e-95 Identity = 162/220 (73.64%), Postives = 184/220 (83.64%), Query Frame = 1
Query: 1 VLDESHTIAASNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAANALTQGETVAFLRRVLLRHSQGMKLGGHSILGLPNITHKVEVLTLPSKERKAYVEFEQGVQNDYVKVRHRLRTQRGSHTMEVLTLLSKFRQACSGGQLVVG--ASXXXXXXXSTPATLDAFCSVCNEMIESPVRTRCGHTFCQ-ACISSVLTKKE 651
VLDESHTIA + T V+ ++SNRRWCMTGTPYISRFSD NGQL+F+GA AFRG SDLGDK N TQ ETVAFLRRVLLRHSQGMKLGG SILGLP+ITHKVE L LP+KERKAYV+FE+G+QNDY+KVRHRLRTQ+GSHTMEVLTLLSKFRQACSGGQL+VG A+ STPA++DAFC +CN++IESPVRT+CGHTFCQ C+ VL E
Sbjct: 775 VLDESHTIATAKHATNEVRDIISNRRWCMTGTPYISRFSDANGQLSFVGAGSAFRG-SDLGDKGPNRETQVETVAFLRRVLLRHSQGMKLGGKSILGLPSITHKVEALALPTKERKAYVDFEKGLQNDYIKVRHRLRTQKGSHTMEVLTLLSKFRQACSGGQLLVGDSATVGGDGDGSTPASVDAFCPICNDIIESPVRTKCGHTFCQLVCVMVVLVSSE 993
BLAST of mRNA_E_fasciculatus_S2_contig8184.16334.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXR8_9STRA) HSP 1 Score: 252 bits (644), Expect = 2.850e-70 Identity = 157/463 (33.91%), Postives = 236/463 (50.97%), Query Frame = 1
Query: 1 VLDESHTIAASNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAE----------------------GAFRGGSDLGDKAANALTQGETVAFLRRVLLRHSQGMKLG--GHSILGLPNITHKVEVLTLPSKERKAYVEFEQGVQNDYVKVRHRLRTQRGSHTMEVLTLLSKFRQACSG-----GQLVVGASXXXXXXXSTPATLDAFCSVCNEMIESPVRTRCGHTFCQACISSVLTKKEDDEGPCPKCKTTVRLAELTSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGTGVVMETKLKALVEKLAGIHAKDPSSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGNMSRTQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARHVTVTKLVLKDSIETRILALQKKQ 1302
+ DESH + + T + LV +WC+TGTP + +D+ Q+ F+G + G R +G + G + +R +L+RHS K G S++ LP+ + + SK+RK Y + E + Y ++ R R H +++ L RQACSG + G +P D C++C E +E P T+C H FC+ CI +L+ ++D GPCP C++ V++++L + GV ++KL L+ +L I + +P +KSLVFSQFNS+++W+K LPK GFQFRTL G+M+ R AL F +DPPTT+FLLS+R+GAVGINLTQAN VFL+EP +N ALE QAIGRV+RLGQ + V + +LV+ DS+E+R++ L +K+
Sbjct: 1028 ICDESHVLKDMSKQTKAILDLVGENKWCVTGTPTNTSLNDLKNQMKFIGVDHTSLLFDMFGKTMENHAQPKSSGRSRRQRSIG-YSVKRHECGNYLFLMRSMLIRHSMDQKYRATGVSLMSLPDKEERTIKIPFSSKDRKDYEKLESAAKQFYEGMKLRARNDLRRHYLKIFGALMPLRQACSGVLAQHDKDSGGKKDKKACHRMSPED-DLECAICLENLEDPRATKCNHVFCRECIEGILSAEDDSTGPCPICRSEVKMSKLRRA---------------------------ILPEPEEEDGGKKGKKAKAKPGVAFKSKLNVLLRELERIRSDEPDAKSLVFSQFNSTIKWMKAELPKHGFQFRTLDGSMNMKDRAKALREFQSDPPTTIFLLSMRAGAVGINLTQANRVFLMEPAMNPALEAQAIGRVHRLGQLKPVEIIRLVICDSLESRMVKLLEKK 1461
BLAST of mRNA_E_fasciculatus_S2_contig8184.16334.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRT6_9STRA) HSP 1 Score: 236 bits (602), Expect = 4.620e-67 Identity = 162/455 (35.60%), Postives = 227/455 (49.89%), Query Frame = 1
Query: 1 VLDESHTIAASNSTTTH-VKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAEG------AFRGGSDLGDK----AANALTQGETVAFLRRVLLRHSQGMK--LGGHSILGLPNITHKVEVLTLPSKERKAYVEFEQGVQNDYVKVRHRLRTQRGSHTM--EVLTLLSKF---RQACSGGQLVVGASXXXXXXXSTPATLDAF---------CSVCNEMIESPVRTRCGHTFCQACISSVLTKKEDDEGPCPKCKTTVRLAELTSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGTGVVMETKLKALVEKLAGIHAKDPSSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGNMSRTQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARHVTVTKLVLKDSIETRIL 1284
+ DESH + +S + T VK LV+ +WC+TGTP + SD+ Q+ F+G E F+G G K AL + + +R +++RHS G ++ LP T + +TL +ERKAY E+ Y RLR Q + L +L K R AC+GG + A+ D F CS+C + T CGH +C+ CI V+T + GPCP C+ + L L V SP V ++K + L+ +L I +DP +KSL+FSQF ++L+WL+ L K GFQFRTL+G+M+ R AL F DPPTTVFLLS+R+GAVGINLTQAN VF+LEP +N ALE QA+GRV+RLGQ + V + +LV+K+SIE R++
Sbjct: 233 ICDESHCLRSSQTKQTQAVKRLVAENKWCVTGTPMNTNLSDLRSQMEFIGIENLNRMFDCFKGLGKTGGKNMPRCFRALER--FLLVMRSMMIRHSMNQTNISSGRELMELPKKTERTIKITLTKEERKAYNTIEKSAMEFY----RRLRMQEDERVFNRKYLAILQKMIPMRLACAGGPVSQNATQKCADIDK--GDKDRFHAKPDEHTECSICLNDFDDARATACGHIYCKECIEGVITAMDSSTGPCPICRREINLEMLRQV---------------------------TFADNEVGDEENEGRDDSPD--FVFKSKFEVLLRELRLIRVEDPEAKSLIFSQFKTTLKWLQTELVKHGFQFRTLSGDMTMKARAKALRDFQADPPTTVFLLSMRAGAVGINLTQANRVFILEPAINPALETQAVGRVHRLGQTKSVEIVRLVVKESIEERMI 650
BLAST of mRNA_E_fasciculatus_S2_contig8184.16334.1 vs.
Match: Probable (helicase-like transcription factor at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RP02_9CHLO) HSP 1 Score: 238 bits (608), Expect = 1.740e-65 Identity = 163/452 (36.06%), Postives = 236/452 (52.21%), Query Frame = 1
Query: 1 VLDESHTIAASNSTTTHVK-TLVSNRRWCMTGTPYISRFSDVNGQLAFLGAE-----GAFRGGSDLGDKAANALTQGETVAFLR---RVLLRHSQGMKLGGHSILGLPNITHKVEVLTLPSKERKAYVEFEQGVQNDYVKVRHRLRTQRGSHTMEVLTLLSKFRQACSGGQL------VVGASXXXXXXXSTPATLDA---FCSVC-NEMIESPVRTRCGHTFCQACISSVLTKKEDDEGPCPKCKTTVRLAELTSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGT-GVVMETKLKALVEKLAGIHAKDPSSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGNMSRTQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARHVTVTKLVLKDSIETRILALQK 1296
VLDESHT+ A + T L ++RRWC +GTP + S+ GQ FLG + F A T G V L R L+RH+Q +LGG ++ LP T + + E++ Y+ + + ++ K + + + +++LLS R CSGG L V L A CS+C N +E P RT C H FC+ CI++ L +E CP C+T +++A+L SS G+ VV E+KL+AL+++LA + +DP++K+L+F+QFNS+LEWL L ++G+ +RT++G+M +R+ A+ AF DPPTTVFLLS+RSGAVGINLT AN+VF+LEP +N ALE QA+GR +R+GQ R VTV KL +K S+E RI+ L K
Sbjct: 1066 VLDESHTVKAGGTQQTAACCALNADRRWCCSGTPISTEVSEFVGQFKFLGCQPFDNKNYFSCHIKPAWSAGGWQTTGGAVNLLYALGRTLIRHTQQQRLGGATVCKLPEKTEEAIAVEFSEAEQRLYLRVHKEAKAEFQKYANGGSMMVARNLLAIMSLLSPLRAICSGGLLRERDVRVPNKDQEEEVPNGVDPNLVAPLEECSICLNHDMERPCRTPCLHWFCRECITAELAVREK----CPLCRTELQVAQLVE---------------------------GVSAAREEDEEVVGAAGSSAGSQAVVSESKLRALLKQLADMRERDPTAKALIFTQFNSTLEWLMARLTEEGYSYRTISGSMPLKKRSQAIDAFQRDPPTTVFLLSMRSGAVGINLTAANHVFILEPAMNPALEDQAVGRAFRMGQTRPVTVKKLYIKGSVEERIMELVK 1486
BLAST of mRNA_E_fasciculatus_S2_contig8184.16334.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z2T4_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.450e-64 Identity = 153/450 (34.00%), Postives = 234/450 (52.00%), Query Frame = 1
Query: 1 VLDESHTIAASNSTTT-HVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAE------GAFRGGSDLGDKAANALTQGETVAFLRRVLLRHS--QGMKLGGHSILGLPNITHKVEVLTLPSKERKAYVEFEQGVQNDYVKVRHRLRTQRGSHTMEVLTLLSKFRQACSGGQLVVGASXXXXXXXSTPATL----DAFCSVCNEMIESPVRTRCG---HTFCQACISSVLTKKEDDEGPCPKCKTTVRLAELTSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGTGVVMETKLKALVEKLAGIHAKDPSSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGNMSRTQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARHVTVTKLVLKDSIETRILALQKKQ 1302
+ DESHT+ N+ + + LV +WC+TGTP + +D+ QLAF+G + G F SD D +G + +R +++RHS Q + G ++ LP+I+H + +ER Y + E Y ++ R + + V + L+ R AC+GGQ++ S + + + CS+C + +P T+C H FC+ CI V+ K GPCP C+ V+++ L + ++K+ L+++L + +DP +KSL+FSQF S+LEW+KR LP GFQ+RTL+G+M+ ++R AL F ND +TVFLLS+R+GAVGINLTQAN VFL+EP +N ALE QAIGRV+RLGQ++ V VT+L + +SIETR+ L +K+
Sbjct: 1015 ICDESHTLKDGNTRNSIALGGLVGENKWCVTGTPMNTSIADLRNQLAFVGIQHTKAMFGVFNSSSDGSDD-----WKGSFLFTMRNLMMRHSMKQKQRANGKDLMSLPSISHHTIRIPFSLEERSEYKKLEDKALGVYKGLKKRGMKEVRKRYLLVTSALTPLRIACAGGQILENDSKEANANKTGKKHVIDPENTTCSICQDCFVNPRATQCKPSPHVFCEECIEGVIGIK-GSAGPCPLCRQPVKMSNLLCA--------------------------EFPEVCHSEEKKSSKDETKNMCQFAFKSKVSRLLQELKKVRDEDPKAKSLIFSQFKSTLEWIKRELPMHGFQYRTLSGDMAMSKRAKALRDFQNDSASTVFLLSIRAGAVGINLTQANRVFLMEPAMNPALEAQAIGRVHRLGQSQKVVVTRLFMTESIETRLAELIEKK 1432
BLAST of mRNA_E_fasciculatus_S2_contig8184.16334.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VRJ5_TETOB) HSP 1 Score: 230 bits (586), Expect = 1.350e-63 Identity = 182/507 (35.90%), Postives = 250/507 (49.31%), Query Frame = 1
Query: 1 VLDESHTI---AASNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAANALT-QGETVAF------LRRVLLRHSQGMKLGGHSILGLPNITHKVEVLTLPSKERKAYVEFEQGVQNDYVKVRHRLRTQRGSHTMEVLTLLSKFRQACSGGQL--------------------VVGASXXXXXXX--------------STPATLDAFCSVCNEMIESPVRTRCGHTFCQACISSVLTKKEDDEGPCPKCK----------------TTVRLAELTSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGTGVVMETKLKALVEKLAGIHAKDPSSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGNMSRTQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARHVTVTKLVLKDSIETRILALQKKQAAQGSASAAVGAP 1341
V DE HT+ AA S L + RRW TGTP S SD+ GQ A L + + + A T G V+ LR ++RH++ + G S+L LP T ++ + L ER+AY++ + VRH ++++ LL R+ CSGGQL V GA+XXXXXXX + PA L+ C +C + E+PV T C H FC+ CI VL+ CP C+ T LA+ T + G + E+KL+AL+ +L + A DPSSK+LVFSQ+NS+LEWL+R LPK+GF FRT+TG+M++ R A+ AF +DPPTTVFLLS+RSGAVGINLT A++VFLLEP LN ALE+QAIGR +R+GQ R VTV + +K S+E RI+ +++ + QG A+ AP
Sbjct: 247 VFDEGHTVKNVAAGQSKA--CVALAAQRRWVCTGTPLSSDISDLLGQFAALHMQ-PMASKAFFDSRIKPAFTGHGYGVSLVPLLYVLRHSMVRHTKAQTIAGVSVLALPEKTEELVPVVLSPAERRAYLDVHAKAAALWASVRHFSPAAINQKLLQIMALLLPLRRICSGGQLRPSDLALPSALEAAATAHAIVSGAAXXXXXXXXXXXXXAVPEDCTITVPAELE--CPICLDAYEAPVMTPCHHWFCKECILGVLSSSTH----CPLCRGDLNPLALRAPGRNNQATPVLAKKTKSRMPRSGSSSSGNDSDGSEDELEAVQGPESADERAARASRRGSAEAAGEVLECESKLQALIAELTAMRAADPSSKALVFSQYNSTLEWLQRRLPKEGFSFRTITGSMAQRARAKAIEAFQSDPPTTVFLLSMRSGAVGINLTAASHVFLLEPCLNPALEEQAIGRAWRMGQQRKVTVKRFYVKGSVEERIMDVRRIR--QGHAAPTAPAP 742
BLAST of mRNA_E_fasciculatus_S2_contig8184.16334.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VTQ3_TETOB) HSP 1 Score: 230 bits (586), Expect = 1.490e-62 Identity = 182/507 (35.90%), Postives = 250/507 (49.31%), Query Frame = 1
Query: 1 VLDESHTI---AASNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAANALT-QGETVAF------LRRVLLRHSQGMKLGGHSILGLPNITHKVEVLTLPSKERKAYVEFEQGVQNDYVKVRHRLRTQRGSHTMEVLTLLSKFRQACSGGQL--------------------VVGASXXXXXXX--------------STPATLDAFCSVCNEMIESPVRTRCGHTFCQACISSVLTKKEDDEGPCPKCK----------------TTVRLAELTSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGTGVVMETKLKALVEKLAGIHAKDPSSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGNMSRTQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARHVTVTKLVLKDSIETRILALQKKQAAQGSASAAVGAP 1341
V DE HT+ AA S L + RRW TGTP S SD+ GQ A L + + + A T G V+ LR ++RH++ + G S+L LP T ++ + L ER+AY++ + VRH ++++ LL R+ CSGGQL V GA+XXXXXXX + PA L+ C +C + E+PV T C H FC+ CI VL+ CP C+ T LA+ T + G + E+KL+AL+ +L + A DPSSK+LVFSQ+NS+LEWL+R LPK+GF FRT+TG+M++ R A+ AF +DPPTTVFLLS+RSGAVGINLT A++VFLLEP LN ALE+QAIGR +R+GQ R VTV + +K S+E RI+ +++ + QG A+ AP
Sbjct: 1167 VFDEGHTVKNVAAGQSKA--CVALAAQRRWVCTGTPLSSDISDLLGQFAALHMQ-PMASKAFFDSRIKPAFTGHGYGVSLVPLLYVLRHSMVRHTKAQTIAGVSVLALPEKTEELVPVVLSPAERRAYLDVHAKAAALWASVRHFSPAAINQKLLQIMALLLPLRRICSGGQLRPSDLALPSALEAAATAHAIVSGAAXXXXXXXXXXXXXAVPEDCTITVPAELE--CPICLDAYEAPVMTPCHHWFCKECILGVLSSSTH----CPLCRGDLNPLALRAPGRNNQATPVLAKKTKSRMPRSGSSSSGNDSDGSEDELEAVQGPESADERAARASRRGSAEAAGEVLECESKLQALIAELTAMRAADPSSKALVFSQYNSTLEWLQRRLPKEGFSFRTITGSMAQRARAKAIEAFQSDPPTTVFLLSMRSGAVGINLTAASHVFLLEPCLNPALEEQAIGRAWRMGQQRKVTVKRFYVKGSVEERIMDVRRIR--QGHAAPTAPAP 1662 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8184.16334.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8184.16334.1 >prot_E_fasciculatus_S2_contig8184.16334.1 ID=prot_E_fasciculatus_S2_contig8184.16334.1|Name=mRNA_E_fasciculatus_S2_contig8184.16334.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=455bp VLDESHTIAASNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAback to top mRNA from alignment at E_fasciculatus_S2_contig8184:28..6607+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8184.16334.1 ID=mRNA_E_fasciculatus_S2_contig8184.16334.1|Name=mRNA_E_fasciculatus_S2_contig8184.16334.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6580bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8184:28..6607+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8184:28..6607+ >mRNA_E_fasciculatus_S2_contig8184.16334.1 ID=mRNA_E_fasciculatus_S2_contig8184.16334.1|Name=mRNA_E_fasciculatus_S2_contig8184.16334.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1365bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8184:28..6607+ (Ectocarpus fasciculatus EfasUO2)back to top |