mRNA_E_fasciculatus_S2_contig8161.16316.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8161.16316.1 vs.
Match: Mx1, (Mx-like dynamin-related GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR39_ECTSI) HSP 1 Score: 432 bits (1110), Expect = 1.370e-139 Identity = 234/277 (84.48%), Postives = 238/277 (85.92%), Query Frame = 3
Query: 279 FLRTQKDAMDEAGESPENMEALKRAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFSEVEELFVEDTSVVEKRRSLQAKKQRLLRGLETLMRMAPDLVATRPGGGAGMADDYVDSSHGLLQQASGRGTDGRDDPAEMKARLEEAALLAQAEGRSTSTDWSSTAWSRPTANTAAASV-------------------------GARQPDHYDLPVRSAQEGTATGLGMPSRGPDPRRPVG 1034
F + +DAMDEAGESPENMEALK AVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFSEVEELFVEDTSVVEKRRSLQAKKQRLL+GLETLMRMAPDLVATRPGGGAG ADDYVDSS GLLQQASGRGTDGRDDPA+MKARLEEAALLAQAEGRSTSTDWSSTAWSRP AN AAAS GARQPDHYDLPVR AQ G A GLG PSRGPDPRRPVG
Sbjct: 558 FDKAVEDAMDEAGESPENMEALKGAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFSEVEELFVEDTSVVEKRRSLQAKKQRLLKGLETLMRMAPDLVATRPGGGAGTADDYVDSSQGLLQQASGRGTDGRDDPAQMKARLEEAALLAQAEGRSTSTDWSSTAWSRPAANAAAASGTSTSYGAGGLGGRQSXXXXXXXGAGGARQPDHYDLPVRPAQGGAAAGLGAPSRGPDPRRPVG 834
BLAST of mRNA_E_fasciculatus_S2_contig8161.16316.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ76_9STRA) HSP 1 Score: 175 bits (444), Expect = 9.890e-46 Identity = 96/158 (60.76%), Postives = 110/158 (69.62%), Query Frame = 3
Query: 294 KDAMDEAGESPENMEALKRAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFSEVEELFVEDTSVVEKRRSLQAKKQRLLRGLETLM--------------------RMAPDLVATRPGG 707
++A+ AGE P AL + E L WYM+NHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVV+LLG ESELFLL R VEELFVED SV+E+RR+LQAK+ RL RG+E+L RMAP++VA P G
Sbjct: 535 EEALATAGEKPAESNALLATLRESLGAWYMKNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVRLLGLAESELFLLAARLENVEELFVEDASVMERRRTLQAKRDRLNRGMESLRSFLLALIAAVAVSCCCAHGDRMAPEVVAEPPPG 692
BLAST of mRNA_E_fasciculatus_S2_contig8161.16316.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D263_9STRA) HSP 1 Score: 109 bits (273), Expect = 9.600e-26 Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 3
Query: 327 ENMEALKRAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFSE----VEELFVEDTSVVEKRRSLQA 629
+N EALK V KL +WYM +HGV + VEDM +++AYW+VATKRLVDNVCMTME DFV++LLG +ESE F+L + + + E+F++D +V +R L A
Sbjct: 33 DNTEALKAQVKAKLGKWYMTSHGVNVQSKVEDMTIMIEAYWDVATKRLVDNVCMTMEHDFVLRLLGALESETFMLATQLGQSRKDLNEVFIQDPAVQLRREKLAA 137
BLAST of mRNA_E_fasciculatus_S2_contig8161.16316.1 vs.
Match: Hypothetical (protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVE7_HETAK) HSP 1 Score: 104 bits (260), Expect = 5.000e-22 Identity = 57/141 (40.43%), Postives = 84/141 (59.57%), Query Frame = 3
Query: 297 DAMDEAGESPENMEALKRAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTN------RFSEVEELFVEDTSVVEKRRSLQAKKQRLLRGLETLMRMAPDLVATRP 701
+A G+ E + AV+ + +Y+ HGV N +M LLQAYWN+AT+R++DNVCMT+E FV +LL +E+ FLL + V +LFVED ++ +RR+L K++RL R L+ + R APD+VA P
Sbjct: 149 EAFGRLGQGDRTAEQMAAAVLTGMGRFYLDAHGVAANGNPAEMAILLQAYWNIATRRVIDNVCMTLEATFVARLLALLENRTFLLGSGPGGEAEAGGVAQLFVEDEALARRRRALADKRERLERALDFVNRAAPDVVAAPP 289
BLAST of mRNA_E_fasciculatus_S2_contig8161.16316.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMV3_HETAK) HSP 1 Score: 97.1 bits (240), Expect = 7.990e-21 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 3
Query: 378 YMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTN------RFSEVEELFVEDTSVVEKRRSLQAKKQRLLRGLETLMRMAPDLVATRP 701
Y+ HGV N +M LLQAYWN+AT+R++DNVCMT+E FV +LL +E+ FLL + V +LFVED ++ +RR+L K++RL R L+ + R APD+VA P
Sbjct: 1 YLDAHGVAANGNPAEMAILLQAYWNIATRRVIDNVCMTLEATFVARLLNLLENRTFLLGSGPGGEAEAGGVAQLFVEDEALARRRRALADKRERLERALDFVNRAAPDVVAAPP 114
BLAST of mRNA_E_fasciculatus_S2_contig8161.16316.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEQ3_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.390e-20 Identity = 61/135 (45.19%), Postives = 80/135 (59.26%), Query Frame = 3
Query: 315 GESPENMEALKRA-VMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLT------NRFSEVEELFVEDTSVVEKRRSLQAKKQRLLRGLETLMRMAPDLVATR 698
G++ E A A V KL +WYM HGV T + VEDMCTLL+AYW+VATKRLVDNVCMT+E DF L K+E FL + +E LF++D VV++R++ KK R+ L+ L +VA R
Sbjct: 557 GDNEEKKSAAAAAHVKRKLGQWYMATHGVNTASKVEDMCTLLEAYWDVATKRLVDNVCMTLEHDFANFSLKKLEESCFLFAADAGVPEKTDLLERLFLQDPRVVQQRKAALEKKGRMEAALDALGESGLRVVAER 691
BLAST of mRNA_E_fasciculatus_S2_contig8161.16316.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2A1_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.910e-19 Identity = 56/139 (40.29%), Postives = 86/139 (61.87%), Query Frame = 3
Query: 285 RTQKDAMDEAGESP-ENMEALKRAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFSE--VEELFVEDTSVVEKRRSLQAKKQRLLRGLETLMRMAPDLVA 692
R K A +AG+ ++M+ L+ +++KL WYM NHGV + + +EDM T+L AYW +++KRL +N CM+ E + +L +ESEL E V+ELF E +VE+R L+ KK R ++++ R+APDLVA
Sbjct: 536 RAMKLASTDAGDGTIKDMDKLEARILDKLGFWYMANHGVSSASLIEDMLTVLMAYWALSSKRLTENTCMSFEAHVLQRLSEDIESELLTAVQTQPEDVVKELFNEPKHMVERRTLLKTKKARFDSAMDSITRLAPDLVA 674
BLAST of mRNA_E_fasciculatus_S2_contig8161.16316.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3H9_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.260e-18 Identity = 56/142 (39.44%), Postives = 75/142 (52.82%), Query Frame = 3
Query: 342 LKRAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFSEVEELFVEDTSVVEKRRSLQAKKQRLLRGLETLMRMAPDLVATRPGGG-----AGMADDYVDSSHGL 752
L+ V+ KL WYM NHGV +M+ VEDM T+L AYW VA KR+ +NVCM E + L +E L + N L V+D ++ +R + KK R+ L L R+APD+VA P G A A VD G+
Sbjct: 608 LREMVLGKLGRWYMANHGVTSMSMVEDMRTVLIAYWGVAAKRITENVCMLFENHLLAALGQDIEKALLDIANEEGAAHRLLVQDPAIDREREETRQKKSRVAAALNALQRVAPDVVAVPPPGAKRGSFAAAAPPAVDGGSGV 749
BLAST of mRNA_E_fasciculatus_S2_contig8161.16316.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNK1_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.000e-17 Identity = 53/125 (42.40%), Postives = 71/125 (56.80%), Query Frame = 3
Query: 345 KRAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFS------EVEELFVEDTSVVEKRRSLQAKKQRLLRGLETLMRMAPDLVATRP 701
K V +L WYM+ HGV T + VEDMCTLLQAYW+VATKRLVD L +S +++ LF ED ++VE RR+ +AK++RL + LE + + APD+VA RP
Sbjct: 292 KTHVKHQLGRWYMQTHGVNTTSKVEDMCTLLQAYWDVATKRLVDXXXXXXXXXXXXXXXXXXXXXXXLFAAEYSNPEKELDLQRLFREDPAIVELRRAAKAKEKRLTQALEAIKQFAPDVVAARP 416
BLAST of mRNA_E_fasciculatus_S2_contig8161.16316.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BUL6_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.810e-16 Identity = 48/109 (44.04%), Postives = 72/109 (66.06%), Query Frame = 3
Query: 372 EWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELF-LLTNRFSE-VEELFVEDTSVVEKRRSLQAKKQRLLRGLETLMRMAPDLVA 692
+WYM NHGV A +EDM T+L AYW ++ KRL +NVCM++E + +L +ESEL ++ + E V ELF E + V ++R+ LQAKK + + + T+ +APD+VA
Sbjct: 1 QWYMANHGVSAAALIEDMRTVLTAYWRLSAKRLTENVCMSVEAHVLTRLSDDIESELLSVMQIKTPELVAELFHEPSEVTDERQILQAKKAKFDKAVATIQELAPDVVA 109 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8161.16316.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8161.16316.1 >prot_E_fasciculatus_S2_contig8161.16316.1 ID=prot_E_fasciculatus_S2_contig8161.16316.1|Name=mRNA_E_fasciculatus_S2_contig8161.16316.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=244bp MDEAGESPENMEALKRAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNback to top mRNA from alignment at E_fasciculatus_S2_contig8161:2326..6927- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8161.16316.1 ID=mRNA_E_fasciculatus_S2_contig8161.16316.1|Name=mRNA_E_fasciculatus_S2_contig8161.16316.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4602bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8161:2326..6927- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8161:2326..6927- >mRNA_E_fasciculatus_S2_contig8161.16316.1 ID=mRNA_E_fasciculatus_S2_contig8161.16316.1|Name=mRNA_E_fasciculatus_S2_contig8161.16316.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=732bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8161:2326..6927- (Ectocarpus fasciculatus EfasUO2)back to top |