mRNA_E_fasciculatus_S2_contig8160.16315.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8160.16315.1 vs.
Match: Hypothetical (protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A815T5N1_ADIRI) HSP 1 Score: 112 bits (281), Expect = 1.320e-26 Identity = 106/156 (67.95%), Postives = 119/156 (76.28%), Query Frame = 1
Query: 19 IPVVSQCKSLVQVIGGDSEGARETQEKFSKQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLEAVADGIPAVGHIKGGIHYALGDKKKGDECMKSASRTTAVVLAGVATGGAXXXXXXXXXXXXXXXXX---GVTTGIDSAVHNEYRPNGLIQAV 477
+PV+SQ KS VQ I GD+EGAR TQE FS+ CXXXXXXXXXXXXXXXXXXXXXXXXX + + +ADGIP VGH KG IHYA GDK+ GD+ MKSASRT V+ G A G XXXXXXXXXXXXXX G+TTG+DSAVH+EYRP G I V
Sbjct: 22 LPVISQLKSAVQAIAGDTEGARRTQENFSRGCXXXXXXXXXXXXXXXXXXXXXXXXXYFVNTMGNLADGIPIVGHAKGAIHYAAGDKEGGDQAMKSASRTVGVIGGGAA--GLLVXXXXXXXXXXXXXXIAMDGITTGVDSAVHSEYRPAGNIALV 175
BLAST of mRNA_E_fasciculatus_S2_contig8160.16315.1 vs.
Match: Uncharacterized (protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6PAF1_RETFI) HSP 1 Score: 108 bits (269), Expect = 3.760e-25 Identity = 101/160 (63.12%), Postives = 111/160 (69.38%), Query Frame = 1
Query: 1 MGNVNAIPVVSQCKSLVQVIGGDSEGARETQEKFSKQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLEAVADGIPAVGHIKGGIHYALGDKKKGDECMKSASRTTAVVLAGVATGGAXXXXXXXXXXXXXXXXX-GVTTGIDSAVHNEYRPNGLIQAV 477
MGN ++IPV+SQ KSLVQVI D EGAR+TQE F +QCXXXXXXXXXXXXXXXXXXXXXXXX + DGIP VGHIKGGIHYA GD K GD MKSAS+TT XXXXXXXXXXXXX G+ TG DSA+ YRP G I +
Sbjct: 1 MGNTDSIPVISQAKSLVQVISSDEEGARKTQENFLRQCXXXXXXXXXXXXXXXXXXXXXXXXLQFVDGVNNFVDGIPVVGHIKGGIHYACGDNKGGDAAMKSASKTTGXXXXXXXXXXXXXXXXXXXXXXXXSNIMDGIITGCDSAISGSYRPYGNISII 160
BLAST of mRNA_E_fasciculatus_S2_contig8160.16315.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVE7_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.290e-24 Identity = 66/153 (43.14%), Postives = 77/153 (50.33%), Query Frame = 1
Query: 28 VSQCKSLVQVIGGDSEGARETQEKFSKQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLEAVADGIPAVGHIKGGIHYALGDKKKGDECMKSASRTTAVVLAGVA---TGGAXXXXXXXXXXXXXXXXXGVTTGIDSAVHNEYRPNGLIQAV 477
+SQ KSLVQV GD+EGAR +QE FSKQC + + DG P VGH KGGIHYA GD GD+ MKSASRTT V+ GVA GG XX G+ TGIDS VH E+RP G + +
Sbjct: 1 ISQVKSLVQVYSGDAEGARNSQENFSKQCPVVSHCHSAVSSMLGDHQGARETQIEFLGVMNNIVDGTPLVGHAKGGIHYACGDDIGGDKAMKSASRTTGVIGGGVAGYCIGGPVGSVGXXILGGAAMD--GIITGIDSTVHKEFRPAGHVAMI 151
BLAST of mRNA_E_fasciculatus_S2_contig8160.16315.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9FSS7_9CRUS) HSP 1 Score: 103 bits (257), Expect = 1.580e-23 Identity = 80/158 (50.63%), Postives = 104/158 (65.82%), Query Frame = 1
Query: 1 MGNVNAIPVVSQCKSLVQVIGGDSEGARETQEKFSKQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLEAVADGIPAVGHIKGGIHYALGDKKKGDECMKSASRTTAVVLAGVATGGAXXXXXXXXXXXXXXXXXGVTTGIDSAVHNEYRPNGLIQA 474
MGN++++PVVSQ KS VQ++ GD+EGA T EKF ++CXXXXXXXXXXXXXXXXXXXXXX L VADGIP VGH+KG +HYA+GD + G + MK+A+R+TAV+ G+ G TT ++SA+ EY P+G + A
Sbjct: 1 MGNIDSLPVVSQVKSTVQLVCGDTEGAARTAEKFLRECXXXXXXXXXXXXXXXXXXXXXXTQKRCGQGLLNVADGIPVVGHVKGLVHYAVGDTEGGTKAMKTATRSTAVIGGGIG-GFVVDGPVGAAGIGAGAAMDTTTTAVESAIRGEYCPSGYLGA 157
BLAST of mRNA_E_fasciculatus_S2_contig8160.16315.1 vs.
Match: uncharacterized (protein LOC117109062 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014258B77) HSP 1 Score: 103 bits (256), Expect = 1.510e-22 Identity = 103/161 (63.98%), Postives = 116/161 (72.05%), Query Frame = 1
Query: 1 MGNVNAIPVVSQCKSLVQVIGGDSEGARETQEKFSKQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLEAVADGIPAVGHIKGGIHYALGDKKKGDECMKSASRTTAVVLAGVATG--GAXXXXXXXXXXXXXXXXXGVTTGIDSAVHNEYRPNGLIQAV 477
MG+ ++IP+VSQ KSLVQVI GD+EGA+ TQE F XXXXXXXXXXXXXXXXXXXXXXXXXXXX +L ADGIP VGHIKG I YA G K GD MK+ASRT V LAG A G XXXXXXXXX G+ TG+DSAVH++Y P G + V
Sbjct: 1 MGSTDSIPIVSQVKSLVQVISGDAEGAKRTQENFLHTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXESLGHFADGIPVVGHIKGVIEYATGHKAAGDASMKAASRTIGV-LAGGAAGFXXXXXXXXXXXXVAAGAAMDGIITGVDSAVHHQYSPYGEVSIV 160
BLAST of mRNA_E_fasciculatus_S2_contig8160.16315.1 vs.
Match: Putative (Chitinase A1 n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0X7B9_HYPDU) HSP 1 Score: 103 bits (256), Expect = 1.520e-22 Identity = 88/155 (56.77%), Postives = 103/155 (66.45%), Query Frame = 1
Query: 13 NAIPVVSQCKSLVQVIGGDSEGARETQEKFSKQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLEAVADGIPAVGHIKGGIHYALGDKKKGDECMKSASRTTAVVLAGVATGGAXXXXXXXXXXXXXXXXXGVTTGIDSAVHNEYRPNGLIQAV 477
++IP VSQ KSLVQV+ GDSEGA++TQE XXXXXXXXXXXXXXXXXXXXXXXXXX NLE G+P +GHI G IHYA+GDK G+ MKSASR+ AV+ G GG G+ TGIDSA+H EYRP G++ V
Sbjct: 26 DSIPGVSQIKSLVQVVSGDSEGAKKTQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGNLEEAVQGVPVLGHIDGAIHYAVGDKAGGEAAMKSASRSVAVI-GGAIVGGPGGAVAAGVAYD------GLVTGIDSAIHGEYRPYGVVDYV 173
BLAST of mRNA_E_fasciculatus_S2_contig8160.16315.1 vs.
Match: Uncharacterized (protein n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H8DKI5_9FUNG) HSP 1 Score: 102 bits (255), Expect = 1.970e-22 Identity = 79/159 (49.69%), Postives = 98/159 (61.64%), Query Frame = 1
Query: 4 GNVNAIPVVSQCKSLVQVIGGDSEGARETQEKFSKQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLEAVADGIPAVGHIKGGIHYALGDKKKGDECMKSASRTTAVVLAGV--ATGGAXXXXXXXXXXXXXXXXXGVTTGIDSAVHNEYRPNGLIQA 474
GNVNAIPVVSQ KSL Q I GD++GA TQE F + CXXXXXXXXXXXXXXXXXXX +N DG+P GHIKG IH+ +GD + G MK ASRT AV+ G+ GGA G +TGI+S ++ E+RP G++++
Sbjct: 28 GNVNAIPVVSQVKSLAQTIAGDADGALRTQEDFVQLCXXXXXXXXXXXXXXXXXXXASEVQVAFGNNALNAIDGVPVAGHIKGAIHFGMGDVEAGCNSMKQASRTAAVIGGGLLGGPGGAVAGGIAFD---------GTSTGIESGIYQEFRPTGVLES 177
BLAST of mRNA_E_fasciculatus_S2_contig8160.16315.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Caenorhabditis remanei TaxID=31234 RepID=A0A260Z970_CAERE) HSP 1 Score: 100 bits (250), Expect = 7.260e-22 Identity = 91/161 (56.52%), Postives = 109/161 (67.70%), Query Frame = 1
Query: 1 MGNVNAIPVVSQCKSLVQVIGGDSEGARETQEKFSKQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLEAVADGIPAVGHIKGGIHYALGDKKKGDECMKSASRTTAVVLAGVATGGAXXXXXXXXXXXXXXXXX-GVTTGIDSAVHNEYRPNGLIQAVR 480
MGNVN IPVVSQ KSLVQV+ G+ +GA ETQEKF +C XXXXXXXXXXXXXXXXXXXXX L ADG+P VGH+KGGIH+ +GD + G++ + SA+RTT V++ G XXXXXXXXXX G T S NEY+P GL +V+
Sbjct: 1 MGNVNTIPVVSQAKSLVQVVTGNPDGAAETQEKFFHECIGVXXXXXXXXXXXXXXXXXXXXXVRCGKQLSNFADGVPVVGHVKGGIHHLVGDHEGGNKAIVSATRTTGVMVGGAXXXXXXXXXXXXXXXIAAGATLDGAATLGSSLRENEYKPEGLFASVQ 161
BLAST of mRNA_E_fasciculatus_S2_contig8160.16315.1 vs.
Match: Uncharacterized (protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4CB42_LOTGI) HSP 1 Score: 98.2 bits (243), Expect = 1.160e-21 Identity = 93/152 (61.18%), Postives = 112/152 (73.68%), Query Frame = 1
Query: 19 IPVVSQCKSLVQVIGGDSEGARETQEKFSKQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLEAVADGIPAVGHIKGGIHYALGDKKKGDECMKSASRTTAVVLAGVATGGAXXXXXXXXXXXXXXXXX-GVTTGIDSAVHNEYRPNGLIQ 471
+P VSQ KS +Q++ GD+EGA++TQE FS+QCXXXXXXXXXXXXXXXXXXXXXXXXX + VA+ +P VGH+KG +HYA+GD GD MKS+SRT V+ G XXXXXXXXXXXXXX GVTT +DS +H YRP G I+
Sbjct: 53 LPGVSQLKSAIQLLCGDAEGAKKTQENFSRQCXXXXXXXXXXXXXXXXXXXXXXXXXEFLATVNEVANQVPIVGHVKGMVHYAMGDNDGGDNAMKSSSRTVGVLAGGAGXXXXXXXXXXXXXXXXXXLIMDGVTTAVDSRIHGHYRPTGYIE 204
BLAST of mRNA_E_fasciculatus_S2_contig8160.16315.1 vs.
Match: Uncharacterized (protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UF63_9BILA) HSP 1 Score: 100 bits (248), Expect = 1.350e-21 Identity = 82/175 (46.86%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 1 MGNVNAIPVVSQCKSLVQVIGGDSEGAR---------------ETQEKFSKQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLEAVADGIPAVGHIKGGIHYALGDKKKGDECMKSASRTTAVVLAGVATGGAXXXXXXXXXXXXXXXXX-GVTTGIDSAVHNEYRPNGLIQAV 477
MGN ++IPVVSQ KS+VQ I GD+EGA E Q++F K + VADGIP VGH+KG IHY GD + GD+ MKSASRTT VV G XXXXXXXXXXXXXX G+TT +DSAVH+EYRP G I AV
Sbjct: 1 MGNTDSIPVVSQTKSIVQAISGDTEGAATSAALLITGNADEALEVQKEFVK-------------------------------GVSDVADGIPVVGHVKGTIHYVAGDTEGGDKAMKSASRTTGVVAGGXXXXXXXXXXXXXXXXXXXXAAMDGITTVVDSAVHDEYRPAGYIAAV 144 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8160.16315.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8160.16315.1 >prot_E_fasciculatus_S2_contig8160.16315.1 ID=prot_E_fasciculatus_S2_contig8160.16315.1|Name=mRNA_E_fasciculatus_S2_contig8160.16315.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=160bp MGNVNAIPVVSQCKSLVQVIGGDSEGARETQEKFSKQCPVVSQTRSCVEAback to top mRNA from alignment at E_fasciculatus_S2_contig8160:5004..5483- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8160.16315.1 ID=mRNA_E_fasciculatus_S2_contig8160.16315.1|Name=mRNA_E_fasciculatus_S2_contig8160.16315.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=480bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8160:5004..5483- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8160:5004..5483- >mRNA_E_fasciculatus_S2_contig8160.16315.1 ID=mRNA_E_fasciculatus_S2_contig8160.16315.1|Name=mRNA_E_fasciculatus_S2_contig8160.16315.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=480bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8160:5004..5483- (Ectocarpus fasciculatus EfasUO2)back to top |