prot_E_fasciculatus_S2_contig816.16311.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig816.16311.1
Unique Nameprot_E_fasciculatus_S2_contig816.16311.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length282
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig816.16311.1 vs. uniprot
Match: A0A6H5K8E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8E9_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 1.120e-112
Identity = 238/281 (84.70%), Postives = 242/281 (86.12%), Query Frame = 0 
Query:    1 MMLLACLSILVLQQCTAFVHPAVLQHSTSLRPSPVHVRAANHRRAVSALSMAKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFADVKTVKTIKTAKRGETLEDGVIGSDDAREAKIEETLRKMGVQSIGQVRAAKAEEEKENKGVAQQITSIFDLIPPETQLVMERVFIAGFAVCLLFLVACGCAIGVEAYFLSTNGKLPPDLDKFIVGTLEPLFTPSLGATFLFSSCLGVLKLGQMGQESVVYREDD 281
            MMLLACLS+ VLQQCTAFVHPAVLQ   SLR SP    AA HRRAVSALSMAKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   FADVKT      AKRGE L+DG IGSDDAREAKIEETLRKMGVQSIGQVRAAKA+E+KENK V QQITSIFDLIPPETQLVMERVFIAGFAVCLLFLVACGCAIGVEAYFLSTNGKLPPDLDKFIVGTLEPLFTPSLGATFLFSSCLGVLKLGQMGQESVVYREDD
Sbjct:   20 MMLLACLSVSVLQQCTAFVHPAVLQQRMSLRASPND--AATHRRAVSALSMAKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAPMMASGGG--------FADVKT------AKRGEILQDGAIGSDDAREAKIEETLRKMGVQSIGQVRAAKAKEDKENKSVGQQITSIFDLIPPETQLVMERVFIAGFAVCLLFLVACGCAIGVEAYFLSTNGKLPPDLDKFIVGTLEPLFTPSLGATFLFSSCLGVLKLGQMGQESVVYREDD 284
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig816.16311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K8E9_9PHAE1.120e-11284.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 227..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..265
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 266..281
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.863
NoneNo IPR availableTMHMMTMhelixcoord: 246..268
NoneNo IPR availableTMHMMTMhelixcoord: 204..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig816contigE_fasciculatus_S2_contig816:3770..10329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig816.16311.1mRNA_E_fasciculatus_S2_contig816.16311.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig816 3725..11324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig816.16311.1 ID=prot_E_fasciculatus_S2_contig816.16311.1|Name=mRNA_E_fasciculatus_S2_contig816.16311.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=282bp
MMLLACLSILVLQQCTAFVHPAVLQHSTSLRPSPVHVRAANHRRAVSALS
MAKKGGSGGSKRKKKKAAAAEGAGSAATVSTRAVPASPSEDDDFEDAGAP
MMASSGGGGGGGGGGFADVKTVKTIKTAKRGETLEDGVIGSDDAREAKIE
ETLRKMGVQSIGQVRAAKAEEEKENKGVAQQITSIFDLIPPETQLVMERV
FIAGFAVCLLFLVACGCAIGVEAYFLSTNGKLPPDLDKFIVGTLEPLFTP
SLGATFLFSSCLGVLKLGQMGQESVVYREDD*
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