mRNA_E_fasciculatus_S2_contig8146.16300.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8146.16300.1
Unique NamemRNA_E_fasciculatus_S2_contig8146.16300.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8146.16300.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR1_ECTSI)

HSP 1 Score: 667 bits (1722), Expect = 2.810e-231
Identity = 394/439 (89.75%), Postives = 404/439 (92.03%), Query Frame = 1
Query:  310 MGWLVLPGDDAGVGGGGSQTPRKRGSFQSNASVDFGLTTGADEGLLDSEEYSLWAAFMKPDSPPLNPSPSPSPQGFSVESLDKAGGGRDRGAGSEFVDESLLKQEYDKDEAEAGWGGAAAVGDGGGRHLYSLQTEKRMFPASETSASTTGAGFGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSSRNGGG---RDGGPSAEAAAGGKGNKKVSRLFVYSSKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVDYSQVDSERNPLASVARLLGIGSAFGVPLSLGADDECGVLMLYSMSCLPPSELMVEFMERSTRLLLDDGPAPITVVQQFRDNPPSAKDIGRVAGAYQQHALWAEHHVRSNSINGSSNGVGVGGTRRSGGG 1617
            MGWLVLPG+D GVGGGGSQTPRKRGSFQSNASVDFGLTTGADEGLLDSEEYSLWAAFMKPDSPPL+P+PSP  QGFSVESLDKAGGGRD GAGSEFVDESLLKQEYDKDEAEAGWGGAAA  DGG R ++SLQ EKRMF ASETSA           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSSRNG     RDG P+AEAA GGKGNKKVSRLF+YSSKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVDYSQVDSERNPLASVARLLGIGSAFGVPLSLGA+DECGVLMLYSMSCLPPSELMVEFMERSTRLLL+DGPAP TVVQQFRDNPPSAKDIGRVAGAYQ HALWAEHHVRSN INGS NGV +GGTRRSGGG
Sbjct:    1 MGWLVLPGEDGGVGGGGSQTPRKRGSFQSNASVDFGLTTGADEGLLDSEEYSLWAAFMKPDSPPLSPAPSPGSQGFSVESLDKAGGGRDGGAGSEFVDESLLKQEYDKDEAEAGWGGAAAAVDGG-RQIHSLQPEKRMFSASETSAXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVERRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSSRNGXXXXXRDGDPAAEAA-GGKGNKKVSRLFLYSSKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVDYSQVDSERNPLASVARLLGIGSAFGVPLSLGAEDECGVLMLYSMSCLPPSELMVEFMERSTRLLLEDGPAPTTVVQQFRDNPPSAKDIGRVAGAYQHHALWAEHHVRSNGINGSINGVSIGGTRRSGGG 434          
BLAST of mRNA_E_fasciculatus_S2_contig8146.16300.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T1_9PHAE)

HSP 1 Score: 687 bits (1773), Expect = 2.930e-227
Identity = 532/890 (59.78%), Postives = 551/890 (61.91%), Query Frame = 1
Query:   94 EGLLGRSDLPLRTAVGAPVYTQGRELGVLVLFSPSLIQNSASTMEGMMLLEDGA-----------------------------------W------------------------------------------------------------------------GGGXXXXXXXXXXXXXX--------------------------------------------------------------------------MGWLVLPGDDAGVGGGGSQTPRKRGSFQSNASVDFGLTTGADEGLLDSEEYSLWAAFMKPDSPPLNPSPSPSPQGFSVESLDKAGGGRDRGAGS----------------------------------------------------------------------------EFVDESLLKQEYDKDEAEAGWGGAAAVGDGGGRHLYSLQTEKRMFPASETSASTTGAGFGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSSRNGGGRDGGPSAEAAAGGKGNKKVSRLFVYSSKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVDYSQVDSERNPLASVARLLGIGSAFGVPLSLGADDECGVLMLYSMSCLPPSELMVEFMERSTRLLLDDGPAPITVVQQFRDNPPSAKDIGRVAGAYQQHALWAEHHVRSNSINGSSNGVGVGGTRRSGGG-GVPGSLAANLL-SQDGSGGFGSGDLGXXXXXXXXXXXXXXXXGRSSPLMAALSECVAADWSGDRAALAVAAXXXXXXXXXXXXXXXXXXXXXXXXXPRDRSGSKAASPARFLFNRIDLDSRPP 1983
            EGLLGRSDLPLRTAVGAPVYTQGRELGVLVLFSPSLIQNSASTME +  L   A                                   W                                                                        GGG                                                                                        MGWLVLPG++ GVGG GSQTP KRGSFQSNASVDFGL+ G+DEGLLDSEEYSLWAAFMKPDSPPL+P+PSPS QGFSV+SLDKAG GRD G GS                                                                            E VDES LKQEYDKDEAEA WGGAAA  +GG R +YS+QTEKRMFP SETSASTT AGFG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLS   G GR+G P+A AA G KGNKKVSRLF+Y+SKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVDYSQVDSERNPLASVARLLGIGSAFGVPLSLGAD+ECGVLMLYSMSCLPPSELMVEFMERSTRLLL+DGPAP TVVQQFRDNPPSAKDIGRVAGAYQ HALWAEHHVRSN ING    VGVGGTRRSGGG GVPGSLAANLL SQDGSG        XXXXXXXXXXXXXXXX    PLMAAL +C AADWSGDRAAL    XXXXXXXXXXXXXXXXXXXXXXXXX   R GSKA+S A FLFNRIDLDSRPP
Sbjct:   59 EGLLGRSDLPLRTAVGAPVYTQGRELGVLVLFSPSLIQNSASTMEFLYTLAQAASASDTTDAFLPALASSFPVGPAPPPPKVALRASPAWRRGSAQKRLRRLDALRASLPVDVMFQTLAMGEMPNPERSLRAVRSVYNDAGGRHRVVVGAGGSIPAEFFRPGGGGLMVGNRSGGRFISSGALTTSDINTRGGTAFGGXXXXXXXXXNAKRPMTPLSLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGWLVLPGEEGGVGGEGSQTPGKRGSFQSNASVDFGLSIGSDEGLLDSEEYSLWAAFMKPDSPPLSPAPSPSSQGFSVKSLDKAGEGRDGGVGSGQAKPCRRSTSYQTLSELLSTNVGTPGISDDDDGSSGGVRDDAAAXXEXXXXXXXXXXXXXXXXXXXXADFLGLKQELVDESPLKQEYDKDEAEASWGGAAAAINGG-RQMYSIQTEKRMFPTSETSASTTAAGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSRNGGSGREGDPAAPAA-GSKGNKKVSRLFLYNSKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVDYSQVDSERNPLASVARLLGIGSAFGVPLSLGADEECGVLMLYSMSCLPPSELMVEFMERSTRLLLEDGPAPTTVVQQFRDNPPSAKDIGRVAGAYQHHALWAEHHVRSNGING----VGVGGTRRSGGGEGVPGSLAANLLLSQDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLMAALPKCAAADWSGDRAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGSKASS-APFLFNRIDLDSRPP 941          
BLAST of mRNA_E_fasciculatus_S2_contig8146.16300.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0B7_9ARCH)

HSP 1 Score: 74.3 bits (181), Expect = 3.110e-11
Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 1
Query:   37 ICEAVRDGGGVVWANTEVQEGLLGRSDLPLRTAVGAPVYTQGRELGVLVLFSPSLIQNSASTME 228
            IC  V +GG +VWANT + EGL GR DLPL TAVG P+ + G +L +LVLF+  LI  S S +E
Sbjct:   43 ICRGVCEGGQIVWANTRISEGLTGRIDLPLNTAVGVPICSIGHDLYILVLFAVGLINMSPSAVE 106          
BLAST of mRNA_E_fasciculatus_S2_contig8146.16300.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHJ3_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.340e-11
Identity = 36/57 (63.16%), Postives = 44/57 (77.19%), Query Frame = 1
Query:   37 ICEAVRDGGGVVWANTEVQEGLLGRSDLPLRTAVGAPVYTQGRELGVLVLFSPSLIQ 207
            IC+ VR+GG +VWANTE   G+LGRSDLPLRTAVG P+   G +L +LVLFSP  +Q
Sbjct:   79 ICDHVRNGGQLVWANTETMSGVLGRSDLPLRTAVGMPICCVGYDLCILVLFSPKYLQ 135          
BLAST of mRNA_E_fasciculatus_S2_contig8146.16300.1 vs.
Match: Hypothetical (protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5G098_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.950e-9
Identity = 118/520 (22.69%), Postives = 195/520 (37.50%), Query Frame = 1
Query:   34 KICEAVRDGGGVVWANTEVQEGLLGRSDLPLRTAVGAPVYTQGR-ELGVLVLFSPSLIQNSASTMEGMMLLEDGAWGGGXXXXXXXXXXXXXXMGWLVLPGDDAGVGGGGSQTPRKRGSFQSNASVDFGLTTGAD--EGLLDSEEYSLWAAF--MKPDSPPLNPSPSPSPQGFSVESLDKAGGGRDRGAGSEFVDESLLKQEYDKDEAEAG-WGGAAAVGDGGGRHLYSL-QTEKRMFPASETSASTTGAGFGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSSRNGGGRDGGPSAEAAAGGKGNKKVSRLFVYSSKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVDYSQ-VDSERNPLASVARLLGIGSAFGVPL-SLGADDECGVLMLYSMSCLPPSELMVEFMERSTRLL---LDDGPAPITVVQQFRDNPPSAKDIGRVAGAYQQHALWAEHHVRSN 1557
            K+ +AV     VVWAN + QEGLLGRSD+ L+TAVG PV       + V+V+FSP++I ++   +  +  +   A                        P + A +   G  TP      +   +         D  E   D E++ L   F  ++ DS  +   PS       + S+D      D    S      L++ +   D+A  G W  +A +      HL ++  T++ +F  ++ S          PA                                            +  + KR R +EFI GFL +S+F+ ADIW+P   +                     +V      SSK   P L ++   S    +    G  G  +    P W+      VD ER+    VA+   I +   VP+ S        V   YS         ++ F++++ RL+   LD+ P  +  V   +D  P+A  +G++A  +++ A++ +    SN
Sbjct:  121 KLIDAVGSSTQVVWANCQKQEGLLGRSDMRLQTAVGLPVLNDKEGNMCVVVMFSPNIIYSNDEFVAYLQSICRSAASVSIECLLPVLKTD---------PDEPASIISVGRPTPANPNLGEGVVACCLSFQNNMDLSESSKDYEDHQLEYPFNFLRKDSLDMPKLPS----SVDLASMDY---NLDDTIASSPPKNKLMQDK--SDQASFGLW--SAIMNTNIDEHLENMISTDEDLFVPTDESYK--------PAVRSASAISVASSTNSDMSQQQ-----------------------IFSQGKRDRLEEFIHGFLGISIFEVADIWVPDQEKT-------------------FQVLTQVSSSSKQDTPPLEEFQKSSSTATIPIWSGAAGRAYGSGNPVWSNSLDIIVDVERSAAFHVAQ---IKTVLAVPIFSSNGTSSSAVFCAYSRQRHSSVPFVLRFVQQALRLVWRGLDNVPPTVLGVDTLKDVAPNA--LGQMAADFEKQAVFEKKRKLSN 565          
BLAST of mRNA_E_fasciculatus_S2_contig8146.16300.1 vs.
Match: Hypothetical (protein n=7 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BF89_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.720e-9
Identity = 118/520 (22.69%), Postives = 195/520 (37.50%), Query Frame = 1
Query:   34 KICEAVRDGGGVVWANTEVQEGLLGRSDLPLRTAVGAPVYTQGR-ELGVLVLFSPSLIQNSASTMEGMMLLEDGAWGGGXXXXXXXXXXXXXXMGWLVLPGDDAGVGGGGSQTPRKRGSFQSNASVDFGLTTGAD--EGLLDSEEYSLWAAF--MKPDSPPLNPSPSPSPQGFSVESLDKAGGGRDRGAGSEFVDESLLKQEYDKDEAEAG-WGGAAAVGDGGGRHLYSL-QTEKRMFPASETSASTTGAGFGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSSRNGGGRDGGPSAEAAAGGKGNKKVSRLFVYSSKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVDYSQ-VDSERNPLASVARLLGIGSAFGVPL-SLGADDECGVLMLYSMSCLPPSELMVEFMERSTRLL---LDDGPAPITVVQQFRDNPPSAKDIGRVAGAYQQHALWAEHHVRSN 1557
            K+ +AV     VVWAN + QEGLLGRSD+ L+TAVG PV       + V+V+FSP++I ++   +  +  +   A                        P + A +   G  TP      +   +         D  E   D E++ L   F  ++ DS  +   PS       + S+D      D    S      L++ +   D+A  G W  +A +      HL ++  T++ +F  ++ S          PA                                            +  + KR R +EFI GFL +S+F+ ADIW+P   +                     +V      SSK   P L ++   S    +    G  G  +    P W+      VD ER+    VA+   I +   VP+ S        V   YS         ++ F++++ RL+   LD+ P  +  V   +D  P+A  +G++A  +++ A++ +    SN
Sbjct:  121 KLIDAVGSSTQVVWANCQKQEGLLGRSDMRLQTAVGLPVLNDKEGNMCVVVMFSPNIIYSNDEFVAYLQSICRSAASVSIECLLPVLKTD---------PDEPASIISVGRPTPANPNLGEGVVACCLSFQNNMDLSESSKDYEDHQLEYPFNFLRKDSLDMPKLPS----SVDLASMDY---NLDDTIASSPPKNKLMQDK--SDQASFGLW--SAIMNTNIDEHLENMISTDEDLFVPTDESYK--------PAVRSASAISVASSTNSDMSQQQ-----------------------IFSQGKRDRLEEFIHGFLGISIFEVADIWVPDQEKT-------------------FQVLTQVSSSSKQDTPPLEEFQKSSSTATIPIWSGAAGRAYGSGNPVWSNSLDIIVDVERSAAFHVAQ---IKTVLAVPIFSSNGTSSSAVFCAYSRQRHSSVPFVLRFVQQALRLVWRGLDNVPPTVLGVDTLKDVAPNA--LGQMAADFEKQAVFEKKRKLSN 565          
BLAST of mRNA_E_fasciculatus_S2_contig8146.16300.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TY34_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.010e-8
Identity = 111/512 (21.68%), Postives = 189/512 (36.91%), Query Frame = 1
Query:   37 ICEAVRDGGGVVWANTEVQEGLLGRSDLPLRTAVGAPVYTQGRELGVLVLFSPSLI--------------QNSASTMEGMM-------LLEDGAWGGGXXXXXXXXXXXXXXMGWLVLPGDDAGVGGGGSQTPRKRGSFQS-NASVDFGLTTGADEGL-----LDSEEYSLWAAFMKPDSPPLNPSPSPSPQG----FSVESLDKAGGGRDRGAGSEFVDESLLKQEYDKDEAEAG--WGGAAAVG-----DGGGRHLYSLQTEKRMFPASE-------TSASTTGAGFGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSSRNGGGRDGGPSAEAAAGGKGNKKVSRLFVYSSKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVDYSQVDSERNPLASVARLLGIG-----SAFGVPLSLGADDECGVLMLYSMSCLPPSELMVEFMERSTRLL 1422
            +C AV++   VVWA+T  ++GLL R  L LR+AVG PV + G+E+ +L++FSP+++              Q ++  + G +       L+   AWG                +     PG++          P  R   ++  ASV F +   A E +     + +E    + +   P  PPL P      QG      +++ D      D    +E +++ +L     +DE   G  W   AA+      D GG  L  + TE   F   +        +   T  G                                              R F  D  +R RF+EF+ GFLSMS+F  A+ W+                      +G + + +++  +       +  W   S  +   +   LP  V  E +  W  D  +++        +    G G     +AFG+P+ +       V++ YS   + P+E+M  F++R+  LL
Sbjct:   91 VCAAVQEAKQVVWASTPAKDGLLSRPSLQLRSAVGVPVCSIGKEVVLLLMFSPAVLELTEEAHRFLYTVAQAASDAVCGFLPASVASSLVTSAAWG------------PRSPLSDPTAPGEN--------NMPHTRTLIEALPASVTFQMVEMASEMVGVNVPIKTEFLETFNSIYNPPPPPLMPVAGGDGQGEEKGLDLDAFDSLPPLEDCFLPTELLEDGVLMSGL-RDEGMTGEDWDFGAALDFIFDKDQGGEEL-GVGTEGEWFGPGKGREGGEVLNGGMTEGGQPDRLSQHTEASQPSGMDDNQSNLKQEVGGLQGKGSDREQGEDSVIRFFYEDALQRLRFEEFVKGFLSMSVFHTAECWVA---------------------RGKETLEQVYCATCLAD---VQSWVRFSSKLHGDTQRALPARVLVENQAIWERDAQRLNPSGAGGGGMENGGGAGKHVIQTAFGLPVHVDQSHRL-VVIFYSTYSIEPAEIMESFVKRALDLL 555          
BLAST of mRNA_E_fasciculatus_S2_contig8146.16300.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YMZ4_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.040e-7
Identity = 115/526 (21.86%), Postives = 185/526 (35.17%), Query Frame = 1
Query:   16 KKKKNGKICEAVRDGGGVVWANTEVQEGLLGRSDLPLRTAVGAPVYTQGR-ELGVLVLFSPSLIQNSASTMEGMMLLEDGAWGGGXXXXXXXXXXXXXXMGWLVLPGDDAGVGGGGSQTPRKRGSFQS-----------NASVDFG------------LTTGADEGLLDSEEYSLWAAFMKPDSPPLNPSPSPSPQGFSVESLDKAGGGRDRGAGSEFVDESLLKQEYDKDEAEAGWGGAAAVGDGGGRHLYSLQTEKRMFPASETSASTTGAGFGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSSRNGGGRDGGPSAEAAAGGKGNKKVSRLFVYSSKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVD-YSQVDSERNPLASVARLLGIGSAFGVPL-SLGADDECGVLMLYSMSCLPPSELMVEFMERSTRLL---LDDGPAPITVVQQFRDNPPSAKDIGRVA 1506
            K K + ++ +A+ +   ++WAN+E +EGLLGRSDLPL+TAVG PV       + V+V+FSP+ +++S   ME +  +   A                      +LP  D        ++P KR S  S           N +   G                 +E L    ++ + AA       P+ P P        +E    + G         F            DEA  G              ++S   +  +   S     T GA                                                  + +  K+ R +EF   FL MS+F AADIW+P++                  G+    +S +   ++     AL+ +S LS  + + S  G  G  F    P W  + +  VD ER    +   +  I S   +P+ S G      V   YS+    P   ++ F++++ RLL   LD     + V +    N  +A D+G +A
Sbjct:  128 KHKLSPRLVDAISNTTQILWANSEKREGLLGRSDLPLQTAVGMPVAVDSNGNMCVVVMFSPAQLRSSDEAMEYLEFISRAATSSSIP---------------CLLPVFD-------EKSPMKRPSQPSVSQQHVVKAITNGTTPLGDGVTARFVSLDVARNATNEFLRKKSDHEVTAAPKDCFGIPMLPVP--------IEIAKSSPGAASMWTADPF------------DEASFG--------------IWSTIMDTPIEDLSMLCGETEGA----------------------KQLPKPDPVSSSASVTSNDSSAKSVNQPILERVKQDRLEEFASAFLGMSVFDAADIWIPMT------------------GESMDVLSHVTSITTSAGGDALSNFSLLSEGLAIQSWSGAVGRAFASGNPVWTSNKHIFVDKER---VTAFAITNIQSVVAIPIMSPGTVTPVCVFSCYSLVKSDPVPFVLRFVQQALRLLWAGLDRVQPHVAVGETLWTNVAAA-DLGEMA 553          
BLAST of mRNA_E_fasciculatus_S2_contig8146.16300.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMI2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.310e-7
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   34 KICEAVRDGGGVVWANTEVQEGLLGRSDLPLRTAVGAPVYTQGR-ELGVLVLFSPSLIQNSASTME 228
            ++ EA+     VVWA T+ QEGL+GRSD+ L+TAVG PV    +  L V+V+FSP+ IQ++   ME
Sbjct:   51 RLVEAISQTAQVVWATTKKQEGLIGRSDVRLQTAVGMPVAMDAQGNLCVVVMFSPNAIQSTDEAME 116          
BLAST of mRNA_E_fasciculatus_S2_contig8146.16300.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYB0_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 4.210e-7
Identity = 32/75 (42.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query:   34 KICEAVRDGGGVVWANTEVQEGLLGRSDLPLRTAVGAPVYTQGR-ELGVLVLFSPSLIQNSASTMEGMMLLEDGA 255
            ++ EA+ +   VVWAN + +EGLLGRSD+ L+TAVG PV T     + ++V+FSP+ +Q++   ME +  +  GA
Sbjct:  143 RLVEAISNTAQVVWANCQTKEGLLGRSDVKLQTAVGMPVATDSSGNMCIVVMFSPNNVQSNDEAMEYLQFISKGA 217          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8146.16300.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
Uncharacterized2.810e-23189.75protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.930e-22759.78protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.110e-1154.69protein (Fragment) n=1 Tax=archaeon TaxID=1906665 ... [more]
Hypothetical4.340e-1163.16protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=... [more]
Hypothetical1.950e-922.69protein n=3 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Hypothetical2.720e-922.69protein n=7 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Uncharacterized2.010e-821.68protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
Hypothetical2.040e-721.86protein (Fragment) n=1 Tax=Grammatophora oceanica ... [more]
Hypothetical2.310e-748.48protein (Fragment) n=1 Tax=Amphiprora paludosa Tax... [more]
Hypothetical4.210e-742.67protein (Fragment) n=1 Tax=Ditylum brightwellii Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8146contigE_fasciculatus_S2_contig8146:75..6792 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score668.3
Seed ortholog evalue4.3e-189
Seed eggNOG ortholog2880.D8LLR1
Model size2328
Hectar predicted targeting categoryother localisation
Exons8
EggNOG OGs2CYMB@1,2S54J@2759
Ec32 ortholog descriptionGAF domain-like
Ec32 orthologEc-04_004820.1
Cds size2328
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8146.16300.1prot_E_fasciculatus_S2_contig8146.16300.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8146 75..6792 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842476.3936477-CDS-E_fasciculatus_S2_contig8146:74..3011696842476.3936477-CDS-E_fasciculatus_S2_contig8146:74..301Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8146 75..301 +
1696842476.4056003-CDS-E_fasciculatus_S2_contig8146:847..10581696842476.4056003-CDS-E_fasciculatus_S2_contig8146:847..1058Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8146 848..1058 +
1696842476.4208717-CDS-E_fasciculatus_S2_contig8146:1577..17311696842476.4208717-CDS-E_fasciculatus_S2_contig8146:1577..1731Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8146 1578..1731 +
1696842476.4443376-CDS-E_fasciculatus_S2_contig8146:2229..28611696842476.4443376-CDS-E_fasciculatus_S2_contig8146:2229..2861Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8146 2230..2861 +
1696842476.4564636-CDS-E_fasciculatus_S2_contig8146:3562..37171696842476.4564636-CDS-E_fasciculatus_S2_contig8146:3562..3717Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8146 3563..3717 +
1696842476.4664648-CDS-E_fasciculatus_S2_contig8146:4587..47371696842476.4664648-CDS-E_fasciculatus_S2_contig8146:4587..4737Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8146 4588..4737 +
1696842476.4848921-CDS-E_fasciculatus_S2_contig8146:5019..54731696842476.4848921-CDS-E_fasciculatus_S2_contig8146:5019..5473Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8146 5020..5473 +
1696842476.496771-CDS-E_fasciculatus_S2_contig8146:6447..67921696842476.496771-CDS-E_fasciculatus_S2_contig8146:6447..6792Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8146 6448..6792 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8146.16300.1

>prot_E_fasciculatus_S2_contig8146.16300.1 ID=prot_E_fasciculatus_S2_contig8146.16300.1|Name=mRNA_E_fasciculatus_S2_contig8146.16300.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=776bp
MSTPKKKKKNGKICEAVRDGGGVVWANTEVQEGLLGRSDLPLRTAVGAPV
YTQGRELGVLVLFSPSLIQNSASTMEGMMLLEDGAWGGGSGAGSASAGGG
GGGMGWLVLPGDDAGVGGGGSQTPRKRGSFQSNASVDFGLTTGADEGLLD
SEEYSLWAAFMKPDSPPLNPSPSPSPQGFSVESLDKAGGGRDRGAGSEFV
DESLLKQEYDKDEAEAGWGGAAAVGDGGGRHLYSLQTEKRMFPASETSAS
TTGAGFGGPAAMSAAAAAAAAGGGGNGKGVPGALLAAHNSAAAAKAAAAE
RRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSSRNGGGRDGGPSA
EAAAGGKGNKKVSRLFVYSSKVQDPALAKWSSLSRNVVLASGVGLPGIVF
RERRPQWAVDYSQVDSERNPLASVARLLGIGSAFGVPLSLGADDECGVLM
LYSMSCLPPSELMVEFMERSTRLLLDDGPAPITVVQQFRDNPPSAKDIGR
VAGAYQQHALWAEHHVRSNSINGSSNGVGVGGTRRSGGGGVPGSLAANLL
SQDGSGGFGSGDLGGGGDGRGSSDNNNNSNGRSSPLMAALSECVAADWSG
DRAALAVAAVAAASGGQGGGFRPDGGAVAFVPPPPRDRSGSKAASPARFL
FNRIDLDSRPPPTHPPLPRSPRDALVLLVWFTPQNPTPTDRPCNTLLCFH
LTWSCPLPASVLRQFPNCPKSAQSKTNFCVRHGGGRKCSIPGCLKVARGR
TSHCAAHGGGVRCCVESCNKAAVGR*
back to top

mRNA from alignment at E_fasciculatus_S2_contig8146:75..6792+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8146.16300.1 ID=mRNA_E_fasciculatus_S2_contig8146.16300.1|Name=mRNA_E_fasciculatus_S2_contig8146.16300.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6718bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8146:75..6792+ (Ectocarpus fasciculatus EfasUO2)
ATGTCCACTCCAAAAAAAAAAAAAAAAAACGGGAAGATTTGCGAAGCCGT CCGGGACGGCGGAGGAGTGGTATGGGCCAACACCGAGGTGCAAGAGGGGC TCCTGGGACGGTCGGACCTCCCGCTGCGGACCGCGGTGGGGGCTCCGGTG TACACGCAGGGCCGCGAGCTGGGGGTCCTGGTTCTCTTCTCGCCCTCCCT CATACAGAACTCGGCGAGCACCATGGAGTTCCTCTACACTCTGGCGCAGG CTGCCTCGGCCTCAGACACCACCGACGCGTTCCTGCCGGCGCTGGCGTCG TCTTTCCCCGTGGGTCCGGCGCCGCCGCCGCCGACGGTGGCGCTGCGCGC CTCCCCCGCCTGGCGGCGGGGCAGCGCGCAGAACCGCCTCCGGCGGCTGG ACGCGCTCCGCGCGTCCCTGCCGGTGGACGTTATGTTCCAGACGCTGGCG ATGGGGCAGATGCCCAACCCGGAGCGGTCGCTGCGCGCCGTGCGCTCCGT GTACAACGACGCCGGCGGCCGCCACCGAGTCGTTGTCGGGGCCGGGGGGT CGATCCCGGCGGAGTTCTTCCGGCCCGGGGGTGGCGGGCTCATGGTGGGC AACCGGGGCGGTGGGAGATTCATGCCCACCGGGGCGCTCACGACTTCGGA CATGAACACACGAGGAGGGGCTGCCTCCGGGGACGACAGCGGCAGCGGCA GTGGCGACGGTGGCGGGGGCAATGCCAAGCGCCCAATGTCGCCGCTGTCG CTGGGGGCGGGGGCGGGCGGGAGAGGCATGATGCTCTTGGAGGATGGGGC TTGGGGGGGCGGTAGTGGTGCTGGAAGTGCCAGCGCAGGCGGCGGCGGCG GCGGGATGGGGTGGCTGGTTTTGCCCGGGGACGACGCGGGGGTTGGCGGG GGGGGATCGCAGACGCCGCGAAAGCGAGGGTCCTTTCAATCCAACGCCTC GGTGGACTTTGGGCTTACCACAGGCGCTGACGAGGTACTGAATGTGTTGC GCTTGTAGATACTCGGGCAGGGGGGGCTTCTTGCTTTTTTGGTTTCTTTT CTATGTTGCAATGTAGTTTTAATTACTGATGCGGAGTGGTTGTTTCGCGG AAGGCGGGGAACGGGTACAGCAGTAAGAGATGATCGTTGGTTATCCACAA GGAGATGCGGATGGCCTGATCAACAAGAAAAAGGCACGCGAGGGTAGACC ATCTTATGGGGAAAGCTGTGTATTTTTTTCCTCTTGGTGGCAGCACAGGA ACAATCGTTGCTACTCCAGCAAACGCACCGGACCAGCCACTTTAATAGAA CCACGAGCGAAACAGCAGTGTGTTTGTGACAGACAGACAGACGGCTGTTT GCTTTGCTCGTACCGTGCGACACGGGGACAGGGTGTCGCTTGGATGTCTT TGGCAGTAATCTGAGATTCTAAGCCACCGCCGCCGCCGCCGCTCCTCCCG TTGCGCGCCCCCCCGTGCGTGCTTCAACCTGTCTGTCTGCGCGTTCCCTG CAGGGCTTGCTGGACTCGGAAGAGTACAGCCTGTGGGCGGCGTTTATGAA GCCAGATAGCCCTCCGCTGAACCCTTCCCCGAGCCCCAGTCCACAAGGGT TTTCTGTCGAGTCCCTGGATAAGGCGGGGGGGGGGCGAGACAGGGGGGCT GGAAGCGGTGAGAGAGGCAAAAAAAAAAAGAGAATCAGGGCGTGCGCGTT GGTTGATGCTGAAAGTAAAGAAGGGGCGACAGGGTTCCGAAATCTCCTCC ATTGAGCGCGCCGTACTGCTGCTGTACGAGAGTGCCGCCGAAAATAGTGC GTTCGGACTCGTCGGAGTGGATGAGTGCCTTGTTCATAGTTTGCTGCGTG ATGTACGAGAAGCACGGCTTACCTATCGGTCCCCTTCCCCCGCCTCGTCC CTGCGCTCTGACGGTGGTCCCAACAAGGCATAGCGAGGCCGTGCAGTCGC TCCACGAGCTATCAGACGCTTTCGGAGCTCCTGAGCACGAACGTGGGGAC CCCCGGCATCAGCGATGACGACGACGGTAGCAGCGGCGTCGGCGACGACG CTGCTGCTGCTGCTGCTGCTGCCGCGGCGGCAGCGGCAGCGACGGCTGCG GCAGCTGTAGCAGCGGCGTCGTCGGCATCGGCTGACTTCTTGGGGCTGAA GCAAGAGTTCGTCGACGAGAGCCTCCTGAAGCAGGAGTACGACAAGGACG AGGCGGAGGCGGGTTGGGGGGGAGCAGCGGCGGTCGGCGACGGCGGCGGG AGACACCTGTACTCCCTCCAAACGGAGAAGAGGATGTTCCCGGCGTCGGA GACTTCGGCGAGCACGACGGGGGCAGGGTTCGGCGGTCCCGCGGCGATGT CTGCGGCGGCGGCGGCGGCGGCGGCGGGCGGCGGCGGGAATGGGAAAGGG GTGCCAGGGGCGTTGCTGGCCGCGCACAACTCAGCGGCGGCGGCCAAAGC AGCGGCGGCCGAGCGGCGGGGCTTCGTCGGGGACGAGCAGAAGCGGAAGC GCTTCGACGAGTTCATCCTGGGCTTCCTGTCCATGTCGCTATTCCAGGCC GCCGACATCTGGCTTCCGCTCTCGTCGCGGAACGGTGGCGGCAGGGACGG GGGCCCATCAGCAGAGGCGGCAGCAGGGGGGAAGGGGAACAAGAAGGTGT CGCGGCTGTTCGTGTACAGCTCGAAGGTGCAGGACCCCGCGCTGGCGAAG TGGTCGAGCCTGAGCCGGAACGTGGTGCTCGCGAGCGGCGTCGGCCTCCC CGGGATCGTGTTTCGGGAGCGGAGGCCGCAGTGGGCGGTGAGTCTGCGTT TGGCGGGGAAGCGCTTGATGATGAAAGTGTCAATCCAAAGCGAAAGCGGC ACCCTCTGGTGCGTCTCTTGTGGGTGGTTCGTCACGCACGGGCTTGGAAA CCGACCTTGGTTGGTTGTTTTGCTGTCCTCCTTGTCAACTGCTGTACCGC GTTAGACCGATGTCTTGTCGGCCATCGGTGTCGGTTAGAGGGGCGTCGTC GATTTATTTCTGAGTCTGGCAGGCCAGTGCTGGGCACACTATTTGCTGGG GGTATGGGACTGGGGGGGGGGCGAAGGGGGGTATCGTACAGTCAGTCCCT CTGTCGCCTGGTCTTGTTCAAGCCGCTTGGTCGGTGCCGGACGGAGCAGT GGTGTTTCTGTGTTTGAAGCGCTTAGGAGCCCTCGCTTTCCTCGGGTCGA GGACGCAGGACCGCCTGCCTGCGATCAATTACCTCGTGTTGTGGACAAAT GGGTTACTGTTCTTAGTGTTGTGGCCTGGCCAATGTCTCTCTGATCATGA AGCCGTGCACAACGTGTACCCGGGCGTGAGCTCCCCGCACCCACCACCTG CGGCATGCTTTCGCGCACACTGCTGTGCGTGGATTGGCATATTTCACCCT GCTGCTGGATTTGCTAAACGTCCGAACGCGACACCCCCGCCCACACCGCC GCCGTGTGGTCGATTGATCCAAACGAACCGCAACGCAGGTGGACTACTCG CAGGTGGACTCGGAGCGCAACCCGTTGGCGTCGGTGGCGCGGCTGCTGGG CATCGGCTCCGCGTTCGGCGTTCCTCTGTCGCTCGGCGCGGACGACGAGT GCGGCGTGCTGATGCTGTACTCCATGTCTTGCCTGCCCCCAAGGTAAGGG TGGTGGTTGCCTCTTGCTTCTCCCACGGCAAGCCTGTTGGGCGGCGGCGG AGAAGGCTTGATTTGCGTATCCCGAGGACCATTGCGCCCCCCCGCCCCGG CTCGTCCTTTCGAAGTCTTCCTCATAAAAAACGTACAAAAGCGTAGCAAT GGTGGCATTGAGGGATCCGGGGGGGGTGGTCCCCCCCCGTAGACATGACC GACTTACTGAATCGGATCAGATTTAGCTCCGACAAGCAGCAGTCCAGTTT TCAGTCTAGGAAGGACGTGCCGACATCCAAAATGACGACAGTCTTGCTAC ACCTCTGGCTAGGTTAACACACCACACAAGACTTATTGTACTATACACAC GAAGCGCTGCTCTCTGGTGGTGTTTCTTCGCTCGCATGTGGTGGTCAGGT TGCCAGGCGCCCTTGAAAACCTTTAGGCCACCTTCTGAAAAAGCGCGTTT AGGTTGAGGGGATGTATCTCGTCGGGCGAGCCGTCTTTTTTTTTTTTTTT TTGCAGTTCGTGCCGAAGGTAAAAATGCAGCGCCTTGTCCGGGACATGCC ATATGCATACAAGAGCTTGTAAAGATTGGAGTACTCCGTATATAGTACCA CGGTTGAGAGAAGGAAGCTTCGAGCTACAACGCGTCGTTTGATTCACGGC AGCCGCAAGAAGGATCAGGTATTACGGCTCCGGATGGGACCCAACGTTTC CGGAAGGCAAAATACTCCCGCGTACGGCACACGAGTAGGCGATCAACAGA TACAGCTTGGAGGAGACGGAACACCGCGGACACGTGGTATCTACTATCTA CATCTTACCTCCCTTTTTTTTTTTTTTTTGCGGCGTGCGTCCTGCGTGTG TACGGCGTTGCAGCGAGCTGATGGTGGAGTTCATGGAGAGATCGACGAGG CTCCTCCTCGATGATGGTCCCGCTCCGATTACGGTGGTGCAGCAGTTCCG CGACAACCCGCCGTCCGCCAAGGATATCGGCCGTGTCGCCGGGGCGTACC AACAGCACGCATTGTGAGCAAGCCTTATATGTATACAGCAGTGATGATGG CTTGCTTCCTTCGGCCGCTCACTCACTGTCTTTTTTTTTTTCGGTATGTC TAGATGGTCCCTTCTCTTTTTTCATCATTCTTCTTCGTCTTCGCCTCATG CATTCCTCTCCTTTGCCCCCCTCCCCCTCCCGGCTTTTTCTTTTTTCCGG GTCTGCGGACGGTCGTCGTGTGCTTGCTCCCCACGTAACGCTGCCGTCTC TCTTTTTTTCGGCGTCTCTTTGTTTGGCGTTCGTTGTGCTCACAGATGGG CAGAGCACCACGTGAGATCCAACAGCATCAACGGCAGCAGCAACGGTGTC GGCGTCGGGGGCACGCGGCGGAGCGGCGGCGGGGGTGTCCCGGGATCGCT CGCCGCCAATCTGCTGTCGCAGGACGGCAGCGGCGGCTTCGGCAGCGGCG ACTTGGGCGGCGGCGGCGACGGCAGGGGCAGCAGCGACAACAACAACAAC AGCAACGGGCGCTCGTCGCCCCTCATGGCCGCCTTGTCGGAGTGCGTGGC CGCCGACTGGAGCGGCGACAGGGCCGCCCTCGCCGTGGCGGCCGTGGCGG CGGCGAGCGGCGGCCAGGGCGGCGGCTTCCGGCCCGACGGGGGCGCCGTG GCCTTCGTGCCGCCCCCCCCCCGGGATAGGTCAGGGAGCAAGGCGGCGTC GCCCGCGCGCTTCCTATTCAACCGGATTGATTTGGACAGCCGGCCTCCGG TCGCCGAGAACAACGTCGGAGTTGGTCCGCCGGTACCGCCGGTGCCGGTG CCGGCGGCGGCGGCAGCGACGGCCGTCGCTAGTCTTGATTTAGAGCCCGC CGCGGGCGGGGGGGGTCGGTCTTCTCCTGCTGCTGCGATGCAAGACGGCG CCGCCGCAGCCGCCGCAGCCGTCACTCGAGGCGGTGTCGGGAAGCTGTGG GCCAGCGGAGGAGGAGGAGGAGCGACTACTAAGGCCGGCAAGGGTAAATC GAAGGCCCGCGGCAGGGCATCATCGGCGCAGGCGGCGGCCGCGGCGGCGG CCCCGGCGGCTCCGGCGGCCCCGGCGGCCCCGGCGACCAGAAGAGCTCCG ACAGGCCGAGCAGGAGGAGGAGGAGGTCGCAAGGCTGCTTCGACAGCGGG AGGCCAGCGAGGAGGCAAGCCCTGTGGCGGCTCAGCCCCCCCGGCCTCGG CCGCGGCAGTGAAGCCCGCTGTCGGCGGCGCGTCGTCCACCAGTACCACC GCCGCCGCAGCCGCCTCCGCCCCGGCTTGCCGCGCGCCGGGGTGCACTAA CCCCCCGAACGGTCGGACCCCGTTCTGCTGGGACCACTGGAGCGCCGCGC GGCAGTGCCAACACGCGGGCTGCGACAAGTTGTCCCAGGGGAACACCCGG CTGTGCATCGCGCACGGCGGCGGGCGGCGCTGCACCCACCCGGGCTGCAA CAAGGGAGCCCGCGACCGCTTCTTCTGCGCGGCGCACGGCGGGGGCAAGA GGTGCTCGGTGCCCGAGTGCGGCAAGGCCGCCGTCGGGGGTTCGGACCTG TGCACGGGGCACGGGGGAGGAAAGCGTTGTCAGGTGCGTTTTTTTTTTTT AGCGTGTTTGTGTGTGTGTTCGAGTGACTGGCTTTCTTTTCTTCTTGTCC CCCAAGCGGGTTATGGTAGGGGACGTACATGCTCGAGTATCATGCGGCGA AAGAACGATGGTGTACCGTCCAGCCAACCCACCCACCCCTCCCCCGCTCT CCCCGCGATGCGTTGGTTTTGTTGGTGTGGTTCACGCCGCAAAACCCTAC GCCCACCGACCGACCCTGCAACACGCTCTTGTGCTTCCACTTGACTTGGT CTTGTCCCTTGCCGGCTTCCGTCCTTCGCCAGTTCCCCAACTGCCCCAAG AGCGCGCAGTCCAAGACGAACTTCTGCGTCCGCCACGGGGGCGGGCGAAA GTGCTCCATCCCGGGCTGCCTCAAGGTGGCCAGAGGGAGAACGTCGCACT GCGCGGCCCACGGGGGAGGGGTCCGCTGCTGCGTGGAATCGTGCAACAAG GCCGCCGTTGGAAGGTGA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8146:75..6792+

>mRNA_E_fasciculatus_S2_contig8146.16300.1 ID=mRNA_E_fasciculatus_S2_contig8146.16300.1|Name=mRNA_E_fasciculatus_S2_contig8146.16300.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2328bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8146:75..6792+ (Ectocarpus fasciculatus EfasUO2)
ATGTCCACTCCAAAAAAAAAAAAAAAAAACGGGAAGATTTGCGAAGCCGT
CCGGGACGGCGGAGGAGTGGTATGGGCCAACACCGAGGTGCAAGAGGGGC
TCCTGGGACGGTCGGACCTCCCGCTGCGGACCGCGGTGGGGGCTCCGGTG
TACACGCAGGGCCGCGAGCTGGGGGTCCTGGTTCTCTTCTCGCCCTCCCT
CATACAGAACTCGGCGAGCACCATGGAAGGCATGATGCTCTTGGAGGATG
GGGCTTGGGGGGGCGGTAGTGGTGCTGGAAGTGCCAGCGCAGGCGGCGGC
GGCGGCGGGATGGGGTGGCTGGTTTTGCCCGGGGACGACGCGGGGGTTGG
CGGGGGGGGATCGCAGACGCCGCGAAAGCGAGGGTCCTTTCAATCCAACG
CCTCGGTGGACTTTGGGCTTACCACAGGCGCTGACGAGGGCTTGCTGGAC
TCGGAAGAGTACAGCCTGTGGGCGGCGTTTATGAAGCCAGATAGCCCTCC
GCTGAACCCTTCCCCGAGCCCCAGTCCACAAGGGTTTTCTGTCGAGTCCC
TGGATAAGGCGGGGGGGGGGCGAGACAGGGGGGCTGGAAGCGAGTTCGTC
GACGAGAGCCTCCTGAAGCAGGAGTACGACAAGGACGAGGCGGAGGCGGG
TTGGGGGGGAGCAGCGGCGGTCGGCGACGGCGGCGGGAGACACCTGTACT
CCCTCCAAACGGAGAAGAGGATGTTCCCGGCGTCGGAGACTTCGGCGAGC
ACGACGGGGGCAGGGTTCGGCGGTCCCGCGGCGATGTCTGCGGCGGCGGC
GGCGGCGGCGGCGGGCGGCGGCGGGAATGGGAAAGGGGTGCCAGGGGCGT
TGCTGGCCGCGCACAACTCAGCGGCGGCGGCCAAAGCAGCGGCGGCCGAG
CGGCGGGGCTTCGTCGGGGACGAGCAGAAGCGGAAGCGCTTCGACGAGTT
CATCCTGGGCTTCCTGTCCATGTCGCTATTCCAGGCCGCCGACATCTGGC
TTCCGCTCTCGTCGCGGAACGGTGGCGGCAGGGACGGGGGCCCATCAGCA
GAGGCGGCAGCAGGGGGGAAGGGGAACAAGAAGGTGTCGCGGCTGTTCGT
GTACAGCTCGAAGGTGCAGGACCCCGCGCTGGCGAAGTGGTCGAGCCTGA
GCCGGAACGTGGTGCTCGCGAGCGGCGTCGGCCTCCCCGGGATCGTGTTT
CGGGAGCGGAGGCCGCAGTGGGCGGTGGACTACTCGCAGGTGGACTCGGA
GCGCAACCCGTTGGCGTCGGTGGCGCGGCTGCTGGGCATCGGCTCCGCGT
TCGGCGTTCCTCTGTCGCTCGGCGCGGACGACGAGTGCGGCGTGCTGATG
CTGTACTCCATGTCTTGCCTGCCCCCAAGCGAGCTGATGGTGGAGTTCAT
GGAGAGATCGACGAGGCTCCTCCTCGATGATGGTCCCGCTCCGATTACGG
TGGTGCAGCAGTTCCGCGACAACCCGCCGTCCGCCAAGGATATCGGCCGT
GTCGCCGGGGCGTACCAACAGCACGCATTATGGGCAGAGCACCACGTGAG
ATCCAACAGCATCAACGGCAGCAGCAACGGTGTCGGCGTCGGGGGCACGC
GGCGGAGCGGCGGCGGGGGTGTCCCGGGATCGCTCGCCGCCAATCTGCTG
TCGCAGGACGGCAGCGGCGGCTTCGGCAGCGGCGACTTGGGCGGCGGCGG
CGACGGCAGGGGCAGCAGCGACAACAACAACAACAGCAACGGGCGCTCGT
CGCCCCTCATGGCCGCCTTGTCGGAGTGCGTGGCCGCCGACTGGAGCGGC
GACAGGGCCGCCCTCGCCGTGGCGGCCGTGGCGGCGGCGAGCGGCGGCCA
GGGCGGCGGCTTCCGGCCCGACGGGGGCGCCGTGGCCTTCGTGCCGCCCC
CCCCCCGGGATAGGTCAGGGAGCAAGGCGGCGTCGCCCGCGCGCTTCCTA
TTCAACCGGATTGATTTGGACAGCCGGCCTCCGCCAACCCACCCACCCCT
CCCCCGCTCTCCCCGCGATGCGTTGGTTTTGTTGGTGTGGTTCACGCCGC
AAAACCCTACGCCCACCGACCGACCCTGCAACACGCTCTTGTGCTTCCAC
TTGACTTGGTCTTGTCCCTTGCCGGCTTCCGTCCTTCGCCAGTTCCCCAA
CTGCCCCAAGAGCGCGCAGTCCAAGACGAACTTCTGCGTCCGCCACGGGG
GCGGGCGAAAGTGCTCCATCCCGGGCTGCCTCAAGGTGGCCAGAGGGAGA
ACGTCGCACTGCGCGGCCCACGGGGGAGGGGTCCGCTGCTGCGTGGAATC
GTGCAACAAGGCCGCCGTTGGAAGGTGA
back to top