prot_E_fasciculatus_S2_contig8144.16299.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8144.16299.1
Unique Nameprot_E_fasciculatus_S2_contig8144.16299.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length370
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8144.16299.1 vs. uniprot
Match: D7FWN0_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWN0_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 7.910e-100
Identity = 249/310 (80.32%), Postives = 258/310 (83.23%), Query Frame = 0
Query:    1 MSRPPTMSQLLKRAGLAKRPRPAGRGVDATPSIANQSNKKRSRVDGGSRQHSSQEXXXXXXXXXXXXXXXSRNENGASAKDVAVDDQIAALERELKGTDGSSSDADSXXXXXXXXXXXXXXXXXXXSRGAGRKRGRVEKLVSPLEAEKIEPLPAHLLPRAGCGVHKDKXXXXXXXXXXXXXXXXXVPGPSQGLDSAVKELMENYEARSSERVPFYCRVCKFQGDSLEALEKHKTEPLHVEAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLQSTMSRQGKWVPGGRGGSESEGSSNGYSGRENG 310
            MS PPTMSQLLKRAGLAKRPRPAGRGVDATPS A+QS +KR RVD           XXXXXXXXXXXXXX R+ENG SAKDVAVDDQIAALERELKG + SSSDA+ XXXXXXXXXXXXX       RGAGR+RGRV KLVSPLE EKIEPLPAHLLPR GCGVHKDK XXXXX           +PGPSQGLDSAVKEL+ NYEARSSERVPFYCRVCKFQGDSLEALEKHK EPLHV    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLQSTMSRQGKWVPGG GG  SE S+NGYSGRENG
Sbjct:    1 MSGPPTMSQLLKRAGLAKRPRPAGRGVDATPSTASQSKRKRPRVDXXXXXXXX---XXXXXXXXXXXXXXGRSENGTSAKDVAVDDQIAALERELKGANDSSSDAEXXXXXXXXXXXXXX-------RGAGRERGRVAKLVSPLEVEKIEPLPAHLLPRPGCGVHKDKKXXXXXPSAAVGTTA--LPGPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLQSTMSRQGKWVPGGWGGPGSERSANGYSGRENG 298          
BLAST of mRNA_E_fasciculatus_S2_contig8144.16299.1 vs. uniprot
Match: A0A6H5KMP8_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMP8_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 8.730e-99
Identity = 242/310 (78.06%), Postives = 247/310 (79.68%), Query Frame = 0
Query:    1 MSRPPTMSQLLKRAGLAKRPRPAGRGVDATPSIANQSNKKRSRVDGGSRQHSSQEXXXXXXXXXXXXXXXSRNENGASAKDVAVDDQIAALERELKGTDGSSSDADSXXXXXXXXXXXXXXXXXXXSRGAGRKRGRVEKLVSPLEAEKIEPLPAHLLPRAGCGVHKDKXXXXXXXXXXXXXXXXXVPGPSQGLDSAVKELMENYEARSSERVPFYCRVCKFQGDSLEALEKHKTEPLHVEAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLQSTMSRQGKWVPGGRGGSESEGSSNGYSGRENG 310
            M RPPTMSQLLKRAGLAKR RPAGRGVDATPS ANQSN KR RVDG          XXXXXXXXXXXXXXSR+ENGASAKDV VDDQIAALERELKG D SSSDA+S    XXXXXXXXXXXXXXX      +RGR  KLVSPLEAEKIEPLPAHLLPR GCGVHKD                  +PGPSQGLDSAVKEL+ NYEARSSERVPFYCRVCKFQGDSLEALEKHK EPLHV    XXXXXXXXXXXXXXXXXXXXXXXXXX    LEKLQS MSRQGKWVPGGRGG  SEGS NGYSGRENG
Sbjct:    1 MFRPPTMSQLLKRAGLAKRSRPAGRGVDATPSPANQSNNKRQRVDGXXXXX-----XXXXXXXXXXXXXXSRSENGASAKDVTVDDQIAALERELKGADVSSSDAESSISSXXXXXXXXXXXXXXX------ERGRATKLVSPLEAEKIEPLPAHLLPRPGCGVHKDNKKKKKPSAAVGTTA---LPGPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKAHLEKLQSMMSRQGKWVPGGRGGPGSEGSLNGYSGRENG 296          
BLAST of mRNA_E_fasciculatus_S2_contig8144.16299.1 vs. uniprot
Match: A0A835Z659_9STRA (C2H2-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z659_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.250e-11
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 0
Query:  192 GLDSAVKELMENYEARSSERVPFYCRVCKFQGDSLEALEKHKTEPLHVE 240
            GL+ AV EL+ NYEA+S+ER+P+YCRVCKFQG S+E L  H+   LH E
Sbjct:    2 GLEGAVNELLANYEAKSAERIPYYCRVCKFQGASVEDLAAHRQTQLHTE 50          
BLAST of mRNA_E_fasciculatus_S2_contig8144.16299.1 vs. uniprot
Match: I2CRP9_NANGC (C2h2 zinc finger protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRP9_NANGC)

HSP 1 Score: 62.4 bits (150), Expect = 8.850e-9
Identity = 28/47 (59.57%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  192 GLDSAVKELMENYEARSSERVPFYCRVCKFQGDSLEALEKHKTEPLH 238
            GL   V EL+ NY+  SSER PFYCR+C+FQG SLE L  HK   LH
Sbjct:    2 GLAQTVAELLSNYQPASSERRPFYCRICRFQGQSLEDLAHHKKGELH 48          
BLAST of mRNA_E_fasciculatus_S2_contig8144.16299.1 vs. uniprot
Match: W7TIZ9_9STRA (C2h2 zinc finger n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIZ9_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.880e-8
Identity = 28/47 (59.57%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  192 GLDSAVKELMENYEARSSERVPFYCRVCKFQGDSLEALEKHKTEPLH 238
            GL   V EL+ NY+  SSER PFYCR+C+FQG SLE L  HK   LH
Sbjct:   33 GLAQTVAELLSNYQPASSERRPFYCRICRFQGQSLEDLAHHKKGELH 79          
BLAST of mRNA_E_fasciculatus_S2_contig8144.16299.1 vs. uniprot
Match: A0A4D9D0V7_9STRA (C2H2-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0V7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.270e-7
Identity = 28/47 (59.57%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  192 GLDSAVKELMENYEARSSERVPFYCRVCKFQGDSLEALEKHKTEPLH 238
            GL   V EL+ NY+  SSER PFYCR+C+FQG SLE L  HK   LH
Sbjct:  168 GLAQTVAELLSNYQPASSERRPFYCRICRFQGQSLEDLAHHKKGELH 214          
BLAST of mRNA_E_fasciculatus_S2_contig8144.16299.1 vs. uniprot
Match: B7FRV3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRV3_PHATC)

HSP 1 Score: 61.6 bits (148), Expect = 3.780e-7
Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 0
Query:  141 VSPLEAEKIEPLPAHLLP----RAGCGVHKDKXXXXXXXXXXXXXXXXXVPGPSQGLDSAVKELMENYEARSSERVPFYCRVCKFQGDSLEALEKHKTEPLHVEAAK 243
            +S ++ ++IEPLP++LLP    R+  G+ +                   V   S GL++AVKE+++ Y  RSSER+PFYCRVC  Q    ++   HK    H  A +
Sbjct:   91 LSSVQKDRIEPLPSNLLPSNRKRSLKGIDRVNASERDDADQSNKKKSKLV---SSGLEAAVKEVLDGYVPRSSERLPFYCRVCAQQMSDEDSFTAHKETEFHTTAVE 194          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8144.16299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FWN0_ECTSI7.910e-10080.32C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KMP8_9PHAE8.730e-9978.06C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z659_9STRA1.250e-1161.22C2H2-type domain-containing protein (Fragment) n=1... [more]
I2CRP9_NANGC8.850e-959.57C2h2 zinc finger protein (Fragment) n=1 Tax=Nannoc... [more]
W7TIZ9_9STRA2.880e-859.57C2h2 zinc finger n=1 Tax=Nannochloropsis gaditana ... [more]
A0A4D9D0V7_9STRA2.270e-759.57C2H2-type domain-containing protein n=1 Tax=Nannoc... [more]
B7FRV3_PHATC3.780e-734.58Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..74
NoneNo IPR availableGENE3D3.30.160.60coord: 233..288
e-value: 3.3E-8
score: 34.9
NoneNo IPR availablePFAMPF12874zf-metcoord: 251..273
e-value: 1.6E-6
score: 28.3
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 214..238
e-value: 6.8
score: 14.8
coord: 249..273
e-value: 0.27
score: 20.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 251..273
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 242..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8144contigE_fasciculatus_S2_contig8144:1768..4332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8144.16299.1mRNA_E_fasciculatus_S2_contig8144.16299.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8144 1673..5177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8144.16299.1 ID=prot_E_fasciculatus_S2_contig8144.16299.1|Name=mRNA_E_fasciculatus_S2_contig8144.16299.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=370bp
MSRPPTMSQLLKRAGLAKRPRPAGRGVDATPSIANQSNKKRSRVDGGSRQ
HSSQEEEEAEQEEEEEERGRSRNENGASAKDVAVDDQIAALERELKGTDG
SSSDADSSSDAESSSSSDDDSASSKGSRGAGRKRGRVEKLVSPLEAEKIE
PLPAHLLPRAGCGVHKDKKKKKPRPKTGAGAGATAVPGPSQGLDSAVKEL
MENYEARSSERVPFYCRVCKFQGDSLEALEKHKTEPLHVEAAKKERKISK
CLLCKKQFTSPPQLQEHLAGKAHLEKLQSTMSRQGKWVPGGRGGSESEGS
SNGYSGRENGDGRWRGGGARGGGWAAGRGRGRDGGRGGRDGGGGRGRGDP
SRGRGGRGRGPGRGYERDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type