mRNA_E_fasciculatus_S2_contig8141.16297.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8141.16297.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD81_ECTSI) HSP 1 Score: 406 bits (1044), Expect = 5.290e-137 Identity = 200/202 (99.01%), Postives = 201/202 (99.50%), Query Frame = 1
Query: 1 VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFTVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFAAASSAAGPQPVINMVTGEGFLNFDSEAGVNVS 606
VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHF VWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFAAAS+AAGPQPVINMVTGEGFLNFDSEAGVNVS
Sbjct: 302 VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFAAASNAAGPQPVINMVTGEGFLNFDSEAGVNVS 503
BLAST of mRNA_E_fasciculatus_S2_contig8141.16297.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD86_ECTSI) HSP 1 Score: 404 bits (1039), Expect = 4.380e-136 Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 1
Query: 1 VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFTVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFAAASSAAGPQPVINMVTGEGFLNFDSEAGVNVS 606
VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLS CILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHF VWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFAAASSAAGPQPVINMVTGEGFLNFDSEAGVNVS
Sbjct: 304 VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSRCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFAAASSAAGPQPVINMVTGEGFLNFDSEAGVNVS 505
BLAST of mRNA_E_fasciculatus_S2_contig8141.16297.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W2_9PHAE) HSP 1 Score: 333 bits (855), Expect = 8.310e-112 Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 1
Query: 1 VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFTVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ 498
VMAELNSLLPILTRADGMS+DNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWF EYEITRNIYNSLLEPEQGG HF VWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ
Sbjct: 215 VMAELNSLLPILTRADGMSQDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFNEYEITRNIYNSLLEPEQGGGHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ 380
BLAST of mRNA_E_fasciculatus_S2_contig8141.16297.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC48_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.960e-53 Identity = 81/84 (96.43%), Postives = 81/84 (96.43%), Query Frame = 1
Query: 247 VIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFTVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ 498
VIFLEHGWF EYEITRNIYNSLLEPEQGG HF VWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ
Sbjct: 15 VIFLEHGWFNEYEITRNIYNSLLEPEQGGGHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ 98
BLAST of mRNA_E_fasciculatus_S2_contig8141.16297.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW6_ECTSI) HSP 1 Score: 160 bits (406), Expect = 1.080e-47 Identity = 83/91 (91.21%), Postives = 84/91 (92.31%), Query Frame = 1
Query: 4 MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIF--LEHGW 270
MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLS CIL+ LE W
Sbjct: 1 MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSRCILLALTKLESLW 91
BLAST of mRNA_E_fasciculatus_S2_contig8141.16297.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S8_9PHAE) HSP 1 Score: 164 bits (414), Expect = 5.100e-45 Identity = 84/92 (91.30%), Postives = 85/92 (92.39%), Query Frame = 1
Query: 1 VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIF--LEHGW 270
VMAELNSLLPILTRADGMSRDNSSSFG LGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCIL+ LE W
Sbjct: 341 VMAELNSLLPILTRADGMSRDNSSSFGTLGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILLALTKLESLW 432
BLAST of mRNA_E_fasciculatus_S2_contig8141.16297.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ9_9PHAE) HSP 1 Score: 132 bits (331), Expect = 1.620e-36 Identity = 73/93 (78.49%), Postives = 76/93 (81.72%), Query Frame = 1
Query: 4 MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRS-------QDGLE---VLEPVVGILAENPGLLRQVMCWHLSHCILVI 252
MAELNSLLPILTRADG SRDNSSSFGALGVVLV GVLA ILLRLG S ++GL VLEPVVGILAE PGLLRQVMCWHLSHCIL +
Sbjct: 1 MAELNSLLPILTRADGRSRDNSSSFGALGVVLVNGVLASILLRLGLSVSTTSWMRNGLGNVWVLEPVVGILAETPGLLRQVMCWHLSHCILSV 93
BLAST of mRNA_E_fasciculatus_S2_contig8141.16297.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV1_9PHAE) HSP 1 Score: 102 bits (253), Expect = 1.100e-23 Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 1
Query: 1 VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEV 162
VMAELNSLLPILTRADGMS+DNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEV
Sbjct: 90 VMAELNSLLPILTRADGMSQDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEV 143
BLAST of mRNA_E_fasciculatus_S2_contig8141.16297.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X2_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.030e-20 Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 4 MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILV 249
+ EL++L+P+L AD + ++SFGALG VLVK LAY+LLRLGR+ + L LEPVV +L+ +PGL+RQ WHL HC +V
Sbjct: 1 LEELSALVPLLLDADDLCARAAASFGALGTVLVKCALAYVLLRLGRTAECLRALEPVVPLLSLHPGLVRQSAVWHLVHCAMV 82
BLAST of mRNA_E_fasciculatus_S2_contig8141.16297.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDA8_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 8.600e-12 Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 1
Query: 496 QGRFAAASSAAGPQPVINMVTGEGFLNFDSEAGVNVS 606
Q RFAAASSAAGPQPVINMVTGEGFLNFDSEAGVNVS
Sbjct: 9 QDRFAAASSAAGPQPVINMVTGEGFLNFDSEAGVNVS 45 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8141.16297.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8141.16297.1 >prot_E_fasciculatus_S2_contig8141.16297.1 ID=prot_E_fasciculatus_S2_contig8141.16297.1|Name=mRNA_E_fasciculatus_S2_contig8141.16297.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=201bp MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGback to top mRNA from alignment at E_fasciculatus_S2_contig8141:4334..6775+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8141.16297.1 ID=mRNA_E_fasciculatus_S2_contig8141.16297.1|Name=mRNA_E_fasciculatus_S2_contig8141.16297.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2442bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8141:4334..6775+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8141:4334..6775+ >mRNA_E_fasciculatus_S2_contig8141.16297.1 ID=mRNA_E_fasciculatus_S2_contig8141.16297.1|Name=mRNA_E_fasciculatus_S2_contig8141.16297.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=603bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8141:4334..6775+ (Ectocarpus fasciculatus EfasUO2)back to top |