prot_E_fasciculatus_S2_contig8136.16288.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8136.16288.1
Unique Name	prot_E_fasciculatus_S2_contig8136.16288.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	53

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8136.16288.1 vs. uniprot
Match: D7FND7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND7_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.590e-21
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0

Query:    1 MPSDIRSVRVTTEVLAEKEGEEPTLAVHVIVDRSVPVLGWVLMVLALFGCAAM 53
            MPSDIRSVRVTTEV+AEKEGEEPTLAVHVIVDRSVPVLGWVLMV ALFG AAM
Sbjct:  544 MPSDIRSVRVTTEVVAEKEGEEPTLAVHVIVDRSVPVLGWVLMVSALFGLAAM 596

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BLAST of mRNA_E_fasciculatus_S2_contig8136.16288.1 vs. uniprot
Match: A0A6H5JIJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ2_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.920e-20
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0

Query:    1 MPSDIRSVRVTTEVLAEKEGEEPTLAVHVIVDRSVPVLGWVLMVLALFGCAAM 53
            MPSDI+SVRVTTEV+ EKEGEEPTLAVHVIVDRSVPVLGWVLMV ALFG AAM
Sbjct:  316 MPSDIQSVRVTTEVVTEKEGEEPTLAVHVIVDRSVPVLGWVLMVSALFGLAAM 368

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8136.16288.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8136.16288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FND7_ECTSI	1.590e-21	94.34	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JIJ2_9PHAE	1.920e-20	90.57	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 34..52
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 53..53
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..33
None	No IPR available	TMHMM	TMhelix		coord: 29..51

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8136	contig	E_fasciculatus_S2_contig8136:557..715 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8136.16288.1	mRNA_E_fasciculatus_S2_contig8136.16288.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8136 557..727 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8136.16288.1 ID=prot_E_fasciculatus_S2_contig8136.16288.1|Name=mRNA_E_fasciculatus_S2_contig8136.16288.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=53bp
MPSDIRSVRVTTEVLAEKEGEEPTLAVHVIVDRSVPVLGWVLMVLALFGC
AAM