mRNA_E_fasciculatus_S2_contig8132.16286.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8132.16286.1
Unique NamemRNA_E_fasciculatus_S2_contig8132.16286.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Polynucleotide (adenylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT4_ECTSI)

HSP 1 Score: 554 bits (1427), Expect = 2.640e-195
Identity = 278/280 (99.29%), Postives = 280/280 (100.00%), Query Frame = 1
Query:    1 MAGRGLGAAGGPAGGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
            MAGRGLGAAGGP+GGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIR+MFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV
Sbjct:    1 MAGRGLGAAGGPSGGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 280          
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Polynucleotide (adenylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW8_9PHAE)

HSP 1 Score: 536 bits (1382), Expect = 3.880e-186
Identity = 276/305 (90.49%), Postives = 279/305 (91.48%), Query Frame = 1
Query:    1 MAGRGLGAAGGPAGGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
            MAGRGLGAAGGP+ GGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIR+MFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV                         PNYDSFLPVVRCVR+WAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV
Sbjct:    1 MAGRGLGAAGGPSSGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVLDGVDRPTEKCVNGPRVTNMIHRLVPNYDSFLPVVRCVRKWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 305          
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Polynucleotide (adenylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG61_9STRA)

HSP 1 Score: 282 bits (721), Expect = 3.330e-87
Identity = 149/284 (52.46%), Postives = 184/284 (64.79%), Query Frame = 1
Query:   70 VPRPM--YEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
             P+P+  +  IN   P+  D   DAKL  ++  NVPVM+  ++  RE+VL ++  +F +WV ++ L  G+ EE A+AAGG I TSGSYRL IHEP SDIDA C+AP  CT   FFT+L++ L  HP V N NAI+TAAVPI+   FD ++IDLGL CLPV +V    +IDDD V                         PNY SFLPVVR VR WAK RG+Y NKMGYLGGVNFNI+VAFACQ+YP A PS LL  FFK+M  W WPN I L +P+DA LGL+V
Sbjct:    5 TPKPVQCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQV 288          
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAC0_9STRA)

HSP 1 Score: 258 bits (659), Expect = 2.240e-78
Identity = 136/277 (49.10%), Postives = 179/277 (64.62%), Query Frame = 1
Query:   85 YEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
            Y+ I T+ P   DLEL AKL+A+M ++ P+   V+++RR  +LG++RS+F  WV D  L+ G+ EE A  AGG I  SGSYRL ++EP +DID ICVAP+F T E FFT+LKE L+ H  V N+ AI+ A VPI+   ++EI+IDL +A L   ++P  +++ DDQ+                         PN  SF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F  Q+YP A PSTLL RFF ++  W WP AIQL +  DA LGLEV
Sbjct:    7 YKAIRTTPPEPADLELSAKLQAYMDEHYPMELDVNIQRRTIILGELRSIFRAWVKDVCLKRGLPEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTREDFFTSLKEILLKHAKVTNLVAIEGALVPILTFDYEEINIDLQIAILDRNSIPDNINVLDDQILSGVDPATEKSLNGPRVTELVIKLTPNRASFIAVLRIVRRWAKRRGLYSNKMGYLGGVNYCILVCFVNQLYPTAAPSTLLLRFFMILTNWKWPLAIQLCKTIDANLGLEV 283          
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFD2_9STRA)

HSP 1 Score: 257 bits (657), Expect = 5.760e-78
Identity = 134/286 (46.85%), Postives = 182/286 (63.64%), Query Frame = 1
Query:   58 AAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
            A G V    Y+PI  + P   D+EL AKLEAFM  + P  T  +++RR  +L ++R +F  WV D  L+ G+ EE A  AGG +  SGSYRL ++EP +DID  CVAP+F T E FF++LKE L+ HP V N+ AI+ A VPI+   +++I+IDL +A L + ++P  ++I DD +                         PN  SF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP+AIQL + YDA+LGLE+
Sbjct:   10 APGTVLEQAYKPIRMTPPEPVDVELSAKLEAFMASHFPTETEKNIQRRTMILAELRRIFRAWVKDVCLQRGVLEEIANEAGGTVLVSGSYRLGVNEPGADIDTNCVAPKFVTREDFFSSLKEILLKHPKVTNLVAIEGATVPILTFDYEDINIDLQIAILNLSSIPDNINILDDNILRGVDSATEKSLNGPRVTELMINLTPNRSSFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEI 295          
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNJ7_9STRA)

HSP 1 Score: 256 bits (655), Expect = 9.760e-78
Identity = 137/286 (47.90%), Postives = 182/286 (63.64%), Query Frame = 1
Query:   58 AAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
            A G V    Y+PI T+ P   DLE+ AKL+A+M  N P  T  +++RR  +LG +R +F  WV D  ++ G+ EE A  AGG I  SGSYRL ++EP +DID ICVAP+F T E FF++LK+ L+ H  V N+ AI+ A VPI+   ++EI+IDL +A L   ++P  L I DD +                         PN +SF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP+AIQL + YDA+LGLEV
Sbjct:    8 APGTVLEQAYKPIRTTPPEPIDLEMSAKLQAYMDKNFPTETEKNIQRRTIILGDLRRIFRAWVKDVCIQRGVLEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTREDFFSSLKDILLKHSKVTNLVAIEGAVVPILTFDYEEINIDLQIAILDRSSIPDDLRILDDNILDGVDTATEKSLNGPRVTELMIKLTPNRESFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEV 293          
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZM27_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.860e-77
Identity = 131/280 (46.79%), Postives = 172/280 (61.43%), Query Frame = 1
Query:   79 PMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV--------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
            P+ +P  T+AP     +LDA LEAFM+ +VPV     LR RE+VLG+++ +F  WV       G+S++ A  AGG++YTSGSYRL +HEP +DID++CVAP  CT   FF TLK  L+ HP V N+ +++TA VPI+   F E++IDL  A LP+  +P  LD+D+D V                           NY SFL  +R  R WAK RG+YSNKMGYLGGVNFNI+VA  CQ++P A PS LL +FF + A WNWP+   L +P D   G EV
Sbjct:    6 PLLKPFETAAPPANYKKLDASLEAFMKVHVPVEKEAGLRTRERVLGELKRIFQDWVRQVCRAKGLSDDLANEAGGRLYTSGSYRLGVHEPGADIDSVCVAPNHCTRTEFFDTLKTALLDHPDVTNLRSVETAVVPIMTFDFCEVNIDLLFAHLPLNAIPAHLDVDEDAVLQGVDEATEKSLNGPRVTNLIYKLVEHNYGSFLVALRVARVWAKKRGIYSNKMGYLGGVNFNILVALVCQLFPAATPSYLLTKFFHIFADWNWPSPAILCRPVDHGYGFEV 285          
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Polynucleotide (adenylyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQA8_GLOUD)

HSP 1 Score: 256 bits (654), Expect = 6.700e-77
Identity = 137/283 (48.41%), Postives = 178/283 (62.90%), Query Frame = 1
Query:   67 HVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
            HV    Y+ I T+ P   DLE   KL+ +M +  P  +  ++ RR  +L ++RS+F  WV    L+ G+ EE A  AGG+I  SGSYRL ++EP +DID ICVAP+  T E FFT+LKE  + HP V+N+ +I+ A VPII   ++EI+IDL +A LP  T+P  L+I DD V                         PN DSF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F  Q+YP A PSTLL RFF ++A W WP AIQL + +DA+LGLEV
Sbjct:   11 HVLEQAYKAIRTTPPEPKDLEQSVKLQKYMDEFFPTESDENITRRSMILAELRSIFRDWVKQVCLQKGVPEEIAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFTSLKEIFLKHPKVSNLVSIEGAIVPIITFDYEEINIDLQIAILPRNTIPDNLNILDDSVLVGVDTATEKSLNGPRVTELMIKLTPNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLANWKWPLAIQLCKTHDAKLGLEV 293          
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=7 Tax=Phytophthora TaxID=4783 RepID=G4YPR7_PHYSP)

HSP 1 Score: 255 bits (652), Expect = 1.110e-76
Identity = 135/283 (47.70%), Postives = 180/283 (63.60%), Query Frame = 1
Query:   67 HVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
            HV    Y+ I T+ P   DLE  AKL++FM ++ P  +  ++ RR  +L ++RS+F QWV    ++ G+ EE A  AGG+I  SGSYRL ++EP +DID ICVAP+  T E FF++LKE  + HP V+N+ AI+ A VPI+   ++EI+IDL +A LP  ++P  L+I DD V                         PN +SF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F  Q+YP A PSTLL RFF ++  W WP AIQL + +DA LGLEV
Sbjct:   11 HVLEQAYKAIRTTPPEPKDLEQSAKLQSFMDEHFPTESDANITRRSLILAELRSIFRQWVKQVCMDKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLQHPKVSNLVAIEGAIVPILTFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEV 293          
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSM9_9STRA)

HSP 1 Score: 253 bits (645), Expect = 4.220e-76
Identity = 133/286 (46.50%), Postives = 181/286 (63.29%), Query Frame = 1
Query:   58 AAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
            A G V    Y+PI  + P   DLEL AKLEAFM  + P  T  +++RR  +L ++R +F  WV D  L+ G+ EE A  AGG +  SGSYRL ++EP +DID  CVAP+F T E FF++LK+ L+ +P V N+ AI+ A VPI+   +++I+IDL +A L   ++P  ++I DD +                         PN  SF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP+AIQL + YDA+LGLE+
Sbjct:    8 APGTVLEQAYKPIRITPPDPADLELSAKLEAFMASHFPTETEKNIQRRTMILAELRRIFRAWVKDVCLQRGVLEEIANEAGGIVLVSGSYRLGVNEPGADIDTNCVAPKFVTREDFFSSLKDILLKNPKVTNLVAIEGATVPILTFDYEDINIDLQIAILDRSSIPDNINILDDNILSGVDSATEKSLNGPRVTELMIRLTPNRSSFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEI 293          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Polynucleotide2.640e-19599.29adenylyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
Polynucleotide3.880e-18690.49adenylyltransferase n=1 Tax=Ectocarpus sp. CCAP 13... [more]
Polynucleotide3.330e-8752.46adenylyltransferase n=1 Tax=Tribonema minus TaxID=... [more]
Poly(A)2.240e-7849.10polymerase n=1 Tax=Thraustotheca clavata TaxID=745... [more]
Poly(A)5.760e-7846.85polymerase n=11 Tax=Aphanomyces astaci TaxID=11209... [more]
Poly(A)9.760e-7847.90polymerase n=1 Tax=Aphanomyces euteiches TaxID=100... [more]
Poly(A)1.860e-7746.79polymerase n=1 Tax=Pelagomonas calceolata TaxID=35... [more]
Polynucleotide6.700e-7748.41adenylyltransferase n=1 Tax=Globisporangium ultimu... [more]
Poly(A)1.110e-7647.70polymerase n=7 Tax=Phytophthora TaxID=4783 RepID=G... [more]
Poly(A)4.220e-7646.50polymerase n=2 Tax=Aphanomyces invadans TaxID=1570... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8132contigE_fasciculatus_S2_contig8132:82..6354 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score558.5
Seed ortholog evalue1.7e-156
Seed eggNOG ortholog2880.D7FWT4
Model size840
KEGG koko:K09254,ko:K14376
KEGG Pathwayko03015,ko04014,ko04624,ko05202,ko05203,map03015,map04014,map04624,map05202,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0002682,GO:0002683,GO:0003006,GO:0003674,GO:0003824,GO:0004652,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005847,GO:0005849,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008285,GO:0009653,GO:0009791,GO:0009908,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0022414,GO:0031123,GO:0031124,GO:0031347,GO:0031348,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0042127,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045824,GO:0046483,GO:0048366,GO:0048367,GO:0048437,GO:0048438,GO:0048441,GO:0048444,GO:0048446,GO:0048449,GO:0048451,GO:0048465,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048608,GO:0048646,GO:0048731,GO:0048827,GO:0048856,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0061458,GO:0065007,GO:0070013,GO:0070566,GO:0071704,GO:0080134,GO:0090304,GO:0090567,GO:0090696,GO:0090697,GO:0090698,GO:0099402,GO:1901360,GO:1905392,GO:1905393
Exons6
EggNOG free text desc.interspecies interaction between organisms
EggNOG OGsCOG5186@1,KOG2245@2759
EC2.7.7.19
Cds size840
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8132.16286.1prot_E_fasciculatus_S2_contig8132.16286.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8132 82..6354 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842475.1124983-CDS-E_fasciculatus_S2_contig8132:81..3211696842475.1124983-CDS-E_fasciculatus_S2_contig8132:81..321Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8132 82..321 +
1696842475.1263533-CDS-E_fasciculatus_S2_contig8132:2105..22491696842475.1263533-CDS-E_fasciculatus_S2_contig8132:2105..2249Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8132 2106..2249 +
1696842475.1398222-CDS-E_fasciculatus_S2_contig8132:2973..30661696842475.1398222-CDS-E_fasciculatus_S2_contig8132:2973..3066Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8132 2974..3066 +
1696842475.1516411-CDS-E_fasciculatus_S2_contig8132:3653..37581696842475.1516411-CDS-E_fasciculatus_S2_contig8132:3653..3758Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8132 3654..3758 +
1696842475.1620908-CDS-E_fasciculatus_S2_contig8132:5473..56081696842475.1620908-CDS-E_fasciculatus_S2_contig8132:5473..5608Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8132 5474..5608 +
1696842475.1725764-CDS-E_fasciculatus_S2_contig8132:6231..63541696842475.1725764-CDS-E_fasciculatus_S2_contig8132:6231..6354Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8132 6232..6354 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8132.16286.1

>prot_E_fasciculatus_S2_contig8132.16286.1 ID=prot_E_fasciculatus_S2_contig8132.16286.1|Name=mRNA_E_fasciculatus_S2_contig8132.16286.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=280bp
MAGRGLGAAGGPAGGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEA
FMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAG
GKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVA
NVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVPNYDS
FLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLL
HRFFKLMAGWNWPNAIQLVQPYDAELGLEV
back to top

mRNA from alignment at E_fasciculatus_S2_contig8132:82..6354+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8132.16286.1 ID=mRNA_E_fasciculatus_S2_contig8132.16286.1|Name=mRNA_E_fasciculatus_S2_contig8132.16286.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6273bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8132:82..6354+ (Ectocarpus fasciculatus EfasUO2)
ATGGCGGGGAGGGGGCTGGGGGCGGCCGGCGGCCCCGCCGGCGGTGGCGG GAAAAGGGCGGCGGGGCACGTGCCGCGACCCATGTACGAACCGATCAACA CCTCAGCCCCGTCCAAGACGGACCTGGAGTTGGACGCCAAGCTGGAGGCT TTCATGCGGGACAACGTGCCGGTGATGACGAGCGTCGATCTGCGGAGGAG GGAGCAAGTGCTGGGGAAGATTCGGTCCATGTTTCTTCAGGTTTGTCGAA AACGTTGACAGAAAGAGGCAGTACGTACTACCGTAAGAGATATGGCACCC CCCCTAAAGACCGGCGCCGAAGTAGTCTAGCCATTTCTTTTTAGTAAGCA AACATACTGGATAAAGTATAGAATCGGCTATGCTGGGGTTAGGGCTAGGG TCTGCGTGCCCCCTCCATGGTTTCTTTGCGTAGGCAATCCACCGGCCTCC AAGGCTCGATTCGATTGCTCGACAACCAAGGGGGTGCGGGAAAGAGCCCG ATACGTCAACTACGAAAAGCCGTCGACGAGATGTTTGTTGAACCTCCATT TTTGGTGTGTTGGCACAAGTTTTAAGTTTGGTAGTGGAGCAATCGAGCTT TCAAGAAGCGGTCTGGGAGTTTCCTGCCATCTCTCAGTCTCTCCAAGGTA GTACCACACATGCCGGGTATCTCGGAGTTTCGTTACACTTGAGATCGAGA CTTGCGGAGCCCTTCTCGCGGTGCCACAATCGGTCGCAGAGGAGTTTACC GCATGACACGTAAGATATCACCCCCCCCCCTTTTTTTCAAAGCTCGTCTT CTCCACGATCAAGAGGATACCAAAATCTATATGATGCCTTTCAGTTGCAC GAGATATCACACCCCCTGGACCGATTTTCAAAGCTCGATTGCTCTGCGAC GCCGACGATGCCAAAGATAGCATAAAACGGTGCGTTTTCGGAAAGTTGTT TTCGGCAGCTTCGGTGTTTGTCCTACAGAGTAACCGGGCTTTGAAAATCG GTCGAGGGGGTACTCATAGTCGTGCATACCAAAGTCGTTAGACCATTGAC CTCGCATCCCTACAAAGCCGGGACGGAGGAGCACGCCGGGTTCTCACCGG ACCAGGCTCTCACATCACCAAGCGCGAAGCGCCGTGAGGTATGCGGCGAG TCGCATAAAGTGTGGTATCTTTGCAACCTACGGCTAACGCTACGGCTAGC GCTCTTTGACGAGGCGGTGCCGCCAATTCCGGCACATTTACTACCTGTGC TGCAGAGCGATCAAGCATCGAAAGTCAGTCCAGGGGGTGTGGTATCTTGT GCAACCGTACGGTATTCTGTTTTGGCCTGCGCCGGGACGGAGATGTCCGG TGGAGAGAGATAGCGATAGGTAACACCGCGAGCGACGGCTACCAACTTGC TGAAGAAAGACAGACACGAGCGAAAGGGAACAACGCTGTAGAACAACATT TCTCACCATCCATCGCTCTACAACACCATTCTGGTTGTTTTTTTCCACTA CATGCTGGTCTTGTCGAGCGAAACCGGGGGGGGGCGCAGTAGTATCGCCG CTGTTTTTTTCTTTCGACTCAGGAACCTTGCCAGAGAAAATATAATATCT GTACGAGCCCTGCCATAGTATAGGTGGGTGGATTGTGGAACTTGTTCGTC GCATTGCCATTGCCATTGCCATTGCCGTCTGTGATGTGATTTGATGATGC CTTCTCTGCTGCCGCTGCTTCTTCACGGCTCGCAATGGTTGCCAGTGCCA GTGAGATAATCTATTGCAGATTGTTTTTTTCTGTTTTCCGTTTTTCTGTC TGTTTGTCAGTTGCGTCTTGCAATATTCGATGTACACGGTGAACGCAATC TGTGATGCCCAACAGGTCGTCCCTTTTTTTTCGTTTTCTGTCCCTGTCCT TCTGTCTCGGTCTCACTCTCTCTCTGTATCTGTTCCTCTGTCTCTCTGTC TCCATCCCGCCCTCTCTCTTCCGCTCCCTCCTCTCCTATCCATACCTCTC TCTGTTTCTCACTCTCATGAACAGTGGGTGATCGATTCGGCCCTGGAGGC AGGCATGTCGGAAGAAGCGGCCAAGGCTGCCGGAGGGAAGATCTACACCT CCGGCTCTTACCGCCTCCGAATACACGAGCCCAACTCCGACATCGACGCC ATTTGCGTGGCTCCGCAGGTGCGAAGGGGGATCAAGAGGTGGGGGGGGAG GGGTACCCTACAAGTGCTTGTGTTGAGACCGCAACCGCAGATAGGTACAA CGGTGGTATGTATCGTTGGGGTAATGTACTTGGTCGTGTGTATGTACTTC GCACTGTTCATCGCGCGCGTGCTATGCCTTGCCGCGCGGATACGGCGGAT AGTTCAAGCGCGAATCACGCGTCGACTGCAAGCGACCGGCAGCACTGACG GTGCGTGGGACGCTGCGTGGTAGCTCTCTTTCTTCGCCGCTCCCGGCCTT CGCGAGTGGTACGACCAGAGTTGGTTGCGGTTGTTACAATCCCGCCGCAA TGAAGACTAAGTTGTCGTGCGTGGAAGGATGGCAATGGACTATGATACGA GAATATTGCTCCTGTTGTGCGGCGTTGCCATCGCACAGACGGGTACCATG TATGCTGTGTGTTTTGCTCGAACGAGGGCTCTCTTAAATACGGAGTAAAT TCAAAAATGTGTGAAGTGTGCAGAGGAAGTACGGCACGTGTACTACCTGG ACGGAAGCTTTTGGGAAGAACTACCCGAAATTCGCATGTGTGTGATGAAA ATGGCGTAGTTGGCAAATTCGCAGAAATTCATGTAACGCCCTTTTTTTAC CCCAACGACAACGACTGTTCGCCCTCCCCAAACAAGGACCCTTCTCGTCC CCCCCAACCGAAACGCCTCTTTCTCCCTCCCAAACGGAACAGTTTTGCAC ATCAGAGCTCTTCTTCACGACCCTGAAGGAGAGGCTCATCGCGCACCCGC TCGTGGCGAACGTGAACGCCATCCAGACCGCTGCGGTAAGCGCTTTCATG TACATGCAACCGCCGCTTGTAACTTCCCGTTTTTCTACATCCATCCAGCC GAGGGGGGGCGCCGCCGTGCTCGTCACGCTGAATGGGGTGTTGGCTATTA TTATAGTCCCGCTTCCGACACTGCTGTCGCTGCCGTCGACAGAGCGCGGA ACGTTTGATTGCCGTGTGGCGTTCTCTATCGCATGTGCTGCTGCCCTGTT TGCGTTTGCATGATGCGCGGAATTTAATGTGACGGCTTGTGCGTGTGGAT CTGGTGTCTGTATTGCGGGACTAGATGCTACTGTGAATCGAATTAGCCCG GCATGGACGCTGAGAAAACGTAACTTGCGGGGGGGGCGGTGTGTATACAC CCACGCACACCTCTCGTGTTCCCGATTCGGCGTTTTCCATCCCACTGTCT GCCGTCGCTAAGGTCAAGTACCCATCATCACAGCCGCCTTTAACGAGATC AGCATCACGTTGCCCCCGCCCCCACCCCCCCCCCCGGTCGTGTGCACGGC ATACCACCGCACTGACCCCCCTCCCCCCTCCCTCCTCCACAACAACACCC TTTCTTCAATCCCTCCCGTCAGGTGCCCATCATCGAGCTGGTGTTCGATG AGATCGACATCGACTTGGGCCTCGCCTGCTTACCGGTGCCAACCGTGCCT CCAACGCTCGACATCGACGACGATCAGGTGCGGGGGGAGGGAGCGTGTAG GGACGAGTGTGAGCAGCGAAGAAGAAGCATGGGTGTGACGATATCAAGTC CAGGGGAGGCTCAATATTTTTTACGTTTGGGAATGGAAAGCGTGTCCGCC CGCATGCATGTCCTCGTCTTCGTAGGCATCACTCTCTGTTCGTGCGTTGT GCGCGAGTTTTGTGACATGTTGACGCTATTGATAGCTACTCATGAGGTCT TCTTTGGGCGCACACCTTTGGTGGAGTGTGTCTGCTACGGTAGCTCGAGA AAAATAACATTTGCAACCAAATGTTTGTGGTGGTGGTGGTTGTTGTTGTT GCTGGCGGTTATAATGGTGGTGATTATCTTGACATGACGAGCAGTCATGG CCTCCTCCATCCAAAGCGTTCTATCATCTTCTTCTTCCGCCGAACGGTGG AGTCATCCTCCGGCAAAACCAAAAATACGGTCGCCCGTGGGCACACGTGT CGACAAATCTATAGTAAGCTTTTTTTTTTTACATGTGTTTCGTGAAAGAC GAAAATGGTATGCATAACCACTCTTTTTTCTCTTTTTTCTCGTCCTTTTT TTCCCGTGCATGTATGCATTTCCCGTGTGTGTGCTGTGTTTTTTTTTGTT TCAGGTTCTGGACGGCGTCGATAGGCCGACGGAGAAATGCGTCAACGGGC CCAGAGTAACCAACATGATTCACAGATTGGTGAGGTGTGAGCTTAGCTAG GCAGTTTGTCGGGGGGGGTGAAGCTGGGTGTTGGGTGCAAGCTAGGTGTT GGTGCCAACTCGGAAGGAGGTTGTAGTCAACGTTTTCGTGTTGGAGGGAG GGAAGAAGGAAAGTCGGACATGCACCGAGCGCCTATGGCCGTTTTCGTCG TGCCCTCCACGCGTGGGCTACAGCCGCCGAACGGAAAGGCGTCGAGGAAA ATCCCGCATCCACGTTCGTTCACGGGTAAGTTGTGCGTGTTTGAAGGAAG GGGTGTGAGGGAGGGGACATGTGCTGCTTTCGGCCGCTGTTTGTTCAGGG CAAGGACCGCCGCCTGCTTCGCGAGTACCAGGTGCCGTGTGCCTCCGTGT ACACAAGGCGACGAGAAATGACGAGAGTAGATATAACGCGAAGCACAAGG GGGGACCAAACAATCTGTTTTTGTGCCCACTTCGTGCTTTGCATTTTCGA TCTCGATGTTTCTCTCTGCTTTATGTACAAGGAGGCATACGGCACGTCCT CGCGGAAAAGGTGACTGCCGGGCCGGACCGCCGTTGCACAGCGGTCGAAA GCACCACAGGTCCCCTCCCGTACACCCGTCCTCGCGACTCCCTCCAAGCA AGTCGAACTGTGCCCCGTGGTTGCGGCGAAAAGAATGTGAACGCGCGCGT TTTTTCCTCTTGGCCCTTCCTTTCGGCGGTTGCCCGTGCTACTAGGCGGG TGGGGGGCACGACGATTCAGTAAACATGTTGGATAAAGCATGCAACCGGG GAACTTGGGGTTAGGGTTAGGGATAGGGTCTGCATACCCCCTCCCCCCGG TTCCATTTCCTCATAAACTTTCTTAATGGCAAAGGACATCCTTTCTTAAT GGCAAAGGACGTCCTTTCTTAATGGCAAAGGACGTCCTTTCTTAATGGCA AAGGACGTCCTTTCTTAATGGCAAAGGACATCCTTTCTTAATGGCAACTG CACATTTGCCGGCCTGCGTTCTTCCCTGCCTTTTATGTGCAGGTTCCGAA CTACGATTCTTTTCTCCCGGTGGTGCGGTGCGTCCGGAGGTGGGCCAAAT CCAGGGGTTTGTATAGCAACAAGATGGGATACTTGGGAGGGGTGAACTTC AACATCATGGTGGCCTTCGCTTGCCAGGTGGGCGGTGAATCAACACTGAG GCAGTGGCGGTTGCGTGTGAGCGATGATACCATGCAGTGGGGGGGGGGTT GTTGAGTGCCGGCATATTCGTACCCAGAGAACTGATCGGCACATCAGCAC TAAGCAGGGGCCCCCCTGCTGTATTGACGAACAATCTCGTTTTGTATGCT GTGGTAGTCTCTACTTTCTTCCTTCGCATGTTTCGTTTGGTTGTTGGTGA GAAGGAGGGCGTCTGGGGGCCTGCAGATGCGGTTGTGTTTGGCATGTCGT TTCTCCGATCACATCCATCTCCGAACCTCGGATCACATCTCCGATCATAT TATATCTCCGATCACATCTCCGATCACACGTCGGATCACATCTCTGATCA TATCTCCGGATCACATGTCGGATCACACCTCCGATCACATATCCCACCAC ATCTCCAATCACATCTCCGATCACACCTCCGGCTCTAGACGCAACGGTGA TGTTAGATCGCCCACCGCACGACACGGCATACCCAACGAACGATCTAATA AGGCATCTTCGCAGCACCCCTTGTAGTCCGAGCATGAACATGAATAGGAG CTCTCCGCGTGCCTCCGAACCAACGTCGTCGCTGTCGTTGTCGTTGCCAG ATGTACCCGAACGCCGGGCCTTCGACACTTCTGCATCGGTTCTTCAAGCT CATGGCCGGTTGGAACTGGCCCAACGCCATCCAGCTCGTGCAGCCTTACG ACGCTGAGCTTGGACTGGAGGTG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8132:82..6354+

>mRNA_E_fasciculatus_S2_contig8132.16286.1 ID=mRNA_E_fasciculatus_S2_contig8132.16286.1|Name=mRNA_E_fasciculatus_S2_contig8132.16286.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=840bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8132:82..6354+ (Ectocarpus fasciculatus EfasUO2)
ATGGCGGGGAGGGGGCTGGGGGCGGCCGGCGGCCCCGCCGGCGGTGGCGG
GAAAAGGGCGGCGGGGCACGTGCCGCGACCCATGTACGAACCGATCAACA
CCTCAGCCCCGTCCAAGACGGACCTGGAGTTGGACGCCAAGCTGGAGGCT
TTCATGCGGGACAACGTGCCGGTGATGACGAGCGTCGATCTGCGGAGGAG
GGAGCAAGTGCTGGGGAAGATTCGGTCCATGTTTCTTCAGTGGGTGATCG
ATTCGGCCCTGGAGGCAGGCATGTCGGAAGAAGCGGCCAAGGCTGCCGGA
GGGAAGATCTACACCTCCGGCTCTTACCGCCTCCGAATACACGAGCCCAA
CTCCGACATCGACGCCATTTGCGTGGCTCCGCAGTTTTGCACATCAGAGC
TCTTCTTCACGACCCTGAAGGAGAGGCTCATCGCGCACCCGCTCGTGGCG
AACGTGAACGCCATCCAGACCGCTGCGGTGCCCATCATCGAGCTGGTGTT
CGATGAGATCGACATCGACTTGGGCCTCGCCTGCTTACCGGTGCCAACCG
TGCCTCCAACGCTCGACATCGACGACGATCAGGTTCCGAACTACGATTCT
TTTCTCCCGGTGGTGCGGTGCGTCCGGAGGTGGGCCAAATCCAGGGGTTT
GTATAGCAACAAGATGGGATACTTGGGAGGGGTGAACTTCAACATCATGG
TGGCCTTCGCTTGCCAGATGTACCCGAACGCCGGGCCTTCGACACTTCTG
CATCGGTTCTTCAAGCTCATGGCCGGTTGGAACTGGCCCAACGCCATCCA
GCTCGTGCAGCCTTACGACGCTGAGCTTGGACTGGAGGTG
back to top