mRNA_E_fasciculatus_S2_contig8129.16280.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8129.16280.1
Unique NamemRNA_E_fasciculatus_S2_contig8129.16280.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8129.16280.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB9_ECTSI)

HSP 1 Score: 424 bits (1089), Expect = 1.310e-145
Identity = 242/330 (73.33%), Postives = 265/330 (80.30%), Query Frame = 1
Query:    1 IRNQVDIGTTSAGGARGNGGQRTIAAWSTQARTHRRGKASGAGQAGSNGQDSGRDGVKAHRGRGLTAEGGEFSPGS*GVLHGNQRWPSSAAAWCRRAKSVPSASVLCQSKNNPIYGDTVQAGTALQLMSGSVPLVGGLAGFTGAALKAGDCYITDLAPDAVECCKLARTLALRLTDGLPDGPIATSRDAGEQCTHGAAGAGWGPGGSKFGVLTDAVSEEAVMEWFIEEVANYEPSDSGESAGRRLGKRHLRKILTAVGRDCLQGANDTGAKVNVLVSAVLPGANIRPAETSSASAGGLVRSPVSAPTHDGNLQKILAELEALKADKEKHN 990
            +R +VD+GTT++ G RGNGGQRTIAAW  + R + +GKA+GA QAGS+GQDSGRD VK +RGRGLTAEGG  SPGS GVLH +QR   S AAWCRRAKSVPSAS       +PIY D VQ GTALQLMSG+VPLVGGLA FTG           DLAPDAVECCKLART+ALRLTDGLPDGPIATS DA E+ T  AAG GW  GGSKFGVLTD VSEEAVMEWFIEEV NYEPSD  E+AG RLGKRHLRKILTAVG+DC QGANDTGAKV++LV  VLP A+IRPAETSSA  GGLVRSPVS PTHDGNL    AELE+LKADKEKH+
Sbjct:   25 MRIRVDVGTTNSEGVRGNGGQRTIAAWQRKRRANIKGKAAGARQAGSDGQDSGRDDVKTYRGRGLTAEGGGLSPGSHGVLHCHQR-SLSPAAWCRRAKSVPSAS-------DPIYCDIVQGGTALQLMSGAVPLVGGLADFTG-----------DLAPDAVECCKLARTVALRLTDGLPDGPIATSHDAEEKRTPNAAGVGWAAGGSKFGVLTDGVSEEAVMEWFIEEVTNYEPSDRRETAGSRLGKRHLRKILTAVGQDCPQGANDTGAKVSLLVYVVLPEADIRPAETSSAWGGGLVRSPVSVPTHDGNL----AELESLKADKEKHS 331          
BLAST of mRNA_E_fasciculatus_S2_contig8129.16280.1 vs.
Match: Leucine (rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 4.080e-41
Identity = 101/214 (47.20%), Postives = 130/214 (60.75%), Query Frame = 1
Query:  289 AKSVPSASVLCQSKNNPIYGDTVQAGTALQLMSGSVPLVGGLAGFTGAALKAGDCY--------ITDLAPDAVECCKLARTLALRLTDGLPDGPIATSRDAGEQCTHGAAGAGWGPGG----SKFGVLTDAVSEEAVMEWFIEEVANYEPSD-------SGESAGRRLGKRHLRKILTAVGRDCLQGANDTGAKVNVLVSAVLPGANIRPAETS 873
            A SV  +S++C SK     G    AG  L+ +S +VP+V GLAG   AALKAGD Y        I D+APD+ +CC LARTLAL+L+DG  DG + T+  A E+ +H  AG G   GG       G   D+ +EEAVM+WF+EEVA+YEP++       +   AGR+LGKRHL+ +L AVGRDCL+G N    KV VLV  +LP A  R   TS
Sbjct:  512 AASVVCSSLVCTSKT----GRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTS 721          
BLAST of mRNA_E_fasciculatus_S2_contig8129.16280.1 vs.
Match: Leucine (Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 2.840e-40
Identity = 101/214 (47.20%), Postives = 128/214 (59.81%), Query Frame = 1
Query:  289 AKSVPSASVLCQSKNNPIYGDTVQAGTALQLMSGSVPLVGGLAGFTGAALKAGDCY--------ITDLAPDAVECCKLARTLALRLTDGLPDGPIATSRDAGEQCTHGAAGAGWGPGG----SKFGVLTDAVSEEAVMEWFIEEVANYEPSD-------SGESAGRRLGKRHLRKILTAVGRDCLQGANDTGAKVNVLVSAVLPGANIRPAETS 873
            A SV  +S++C SK     G    AG  L+ +S +VP+V GLAG   AALKAGD Y        I D+APD+ +CC LARTLAL+L+DG  DG + T+  A E+ TH  AG G   GG       G   D+ +EEAVM+WF+EEVA+YEP++           AGR+LG RHL+ +L AVGRDCL+G N    KV VLV  +LP A  R   TS
Sbjct:  724 AASVVCSSLVCTSKT----GRMGAAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTS 933          
BLAST of mRNA_E_fasciculatus_S2_contig8129.16280.1 vs.
Match: Putative (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 1.020e-38
Identity = 99/214 (46.26%), Postives = 126/214 (58.88%), Query Frame = 1
Query:  289 AKSVPSASVLCQSKNNPIYGDTVQAGTALQLMSGSVPLVGGLAGFTGAALKAGDCY--------ITDLAPDAVECCKLARTLALRLTDGLPDGPIATSRDAGEQCTHGAAGAGWGPG----GSKFGVLTDAVSEEAVMEWFIEEVANYEPSD-------SGESAGRRLGKRHLRKILTAVGRDCLQGANDTGAKVNVLVSAVLPGANIRPAETS 873
            A SV S+S++C SK     G    AG  L+ +S +VP+V GLAG   AALKAGD Y        I D+APD+ +CC LAR LAL+L+DG  DG + T   A E+ TH  AG G   G        G   D+ +EEAVM+WF+EEVA+YEP+        +   AGR+LG RHL+ +L AVGRDCL+G N    KV VLV  +LP A  +   TS
Sbjct:  539 AASVVSSSLVCTSKT----GRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVEGECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTS 748          
BLAST of mRNA_E_fasciculatus_S2_contig8129.16280.1 vs.
Match: Putative (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 3.110e-37
Identity = 98/219 (44.75%), Postives = 134/219 (61.19%), Query Frame = 1
Query:  346 GDTVQAGTALQLMSGSVPLVGGLAGFTGAALKAGDCY--------ITDLAPDAVECCKLARTLALRLTDGLPDGPIATSRDAGEQCTHGAAGAGWGPG-GSKFGVLTDAVSEEAVMEWFIEEVANYEPSDSGESAGRRLGKRHLRKILTAVGRDCLQGANDTGAKVNVLVSAVLPGANIRPAETSSASAGGLVRSPVS-APTHDGNLQKILAELEALKA 972
            G   + GTAL L+S +VP++ GLAG  G AL+ GD Y        IT +A D +ECC LAR LAL+LTDGL D       +  + CTH  AG   G G G    +L D + E+ V E  +EEVA YE SD G   G+RLGK+HLRK+L A+ R CL G++    K+ +L+  +LP A+IR +ETS +    +V+SP + APTH+G L  + A++ AL+A
Sbjct:  594 GGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHYLQTRRLAKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDETDQVCTHTTAGMNGGSGSGRDADILPDIIIEDDVFEHLLEEVARYERSDHG---GKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMELLLLEILPEADIRTSETSISPKEVIVQSPPALAPTHNGTLPSM-ADIAALQA 808          
BLAST of mRNA_E_fasciculatus_S2_contig8129.16280.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 3.160e-37
Identity = 101/219 (46.12%), Postives = 134/219 (61.19%), Query Frame = 1
Query:  346 GDTVQAGTALQLMSGSVPLVGGLAGFTGAALKAGD-CY-------ITDLAPDAVECCKLARTLALRLTDGLPDGPIATSRDAGEQCTHGAAGAGWGPG-GSKFGVLTDAVSEEAVMEWFIEEVANYEPSDSGESAGRRLGKRHLRKILTAVGRDCLQGANDTGAKVNVLVSAVLPGANIRPAETSSASAGGLVRSPVS-APTHDGNLQKILAELEALKA 972
            G   + GTAL L+S +VP++ GLAG  G AL+ GD C        IT +A D +ECC LAR LAL+LTDGL D       +A +  TH  AG   G G G    +  D + E+ V E+ +EEVA YE SD G   G+RLGK+HLRK+L A+ R CL G++    K+  L+  +LPGA+IR +ETSS     +VRSP + APTHDG L  + A++ AL+A
Sbjct:  554 GGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHCLQTRRLVKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDEADQVYTHITAGMNGGSGSGRDADISPDDMIEDDVFEYLLEEVARYERSDHG---GKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMEALLLEILPGADIRTSETSSTPKKVIVRSPPALAPTHDGRLPSM-ADIAALQA 768          
BLAST of mRNA_E_fasciculatus_S2_contig8129.16280.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEA4_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 3.280e-36
Identity = 107/246 (43.50%), Postives = 131/246 (53.25%), Query Frame = 1
Query:  349 DTVQAGTALQLMSGSVPLVGGLAGFTGAALKA-------------------------------GDCYITDLAPDAVECCKLARTLALRLTDGLPDGPIATSRDAGEQCTHGAAGAGWGPGGSKFGVLTDAVSEEAVMEWFIEEVANYEPSDSG------ESAGRRLGKRHLRKILTAVGRDCLQGANDTGAKVNVLVSAVLPGANIRPAETSSASAGGLVRSP-VSAPTHDGNLQKILAELEALKA 972
            D V AG A+QL+S +VP+VGGLA F  AALKA                                D  ITDLA DAVE C LAR LALR+T+GL  G I+T+ ++         G GW       G L D  SEEAVMEWF EEVAN+E + +       E AGRRLGK+HL+K+L AVG+  L G N T  KV  L+  +  G+  R  +   A    LV  P V AP+HDG+L +  AE  ALKA
Sbjct:  139 DEVAAGEAMQLLSHAVPVVGGLASFAAAALKARDHRMQTRRVVKHLQPSTYVHSRPTGLNQLFDDWQITDLAADAVERCSLARRLALRMTEGLAAGTISTTDNS-------VGGRGWN---LDLGALPDGTSEEAVMEWFTEEVANHEANTTASRGTPAEQAGRRLGKQHLKKLLMAVGQGRLLGTNTTEEKVEKLLEVIAGGSGSRVTKPPRAEDKSLVEYPAVPAPSHDGDLDRD-AEFAALKA 373          
BLAST of mRNA_E_fasciculatus_S2_contig8129.16280.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 2.420e-35
Identity = 101/229 (44.10%), Postives = 133/229 (58.08%), Query Frame = 1
Query:  346 GDTVQAGTALQLMSGSVPLVGGLAGFTGAALKAGDCY--------ITDLAPDAVECCKLARTLALRLTDGLPDGPIATSRDAGEQCTHGAAG-AGWGPGGSKFGVLTDAVSEEAVMEWFIEEVANYEPSDSGESAGRRLGKRHLRKILTAVGRDCLQGANDTGAKVNVLVSAVLPGANIRPAETSSASAGGLVRSP-VSAPTHDGNLQK------ILAELEALKADKEK 984
            G   + G AL+LMSG+VPL+GGL    G AL+AGD Y        IT +APD VECC LAR LAL+LTDGL +   AT  D  +   +  AG +G G G     ++   +SEE V ++ +EEV  YE +D G   G+RLGK+HLRK+L A+   CL G+N T  K+ +L+  +LP A+ +PA T       +VRSP   A  HD  L        I AEL ALK+ K+K
Sbjct:  282 GGMGKVGAALKLMSGAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSGCGRGAD---MMPGDMSEEDVFKYLLEEVTAYERNDHG---GKRLGKKHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDK 504          
BLAST of mRNA_E_fasciculatus_S2_contig8129.16280.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 2.500e-33
Identity = 100/229 (43.67%), Postives = 131/229 (57.21%), Query Frame = 1
Query:  346 GDTVQAGTALQLMSGSVPLVGGLAGFTGAALKAGDCY--------ITDLAPDAVECCKLARTLALRLTDGLPDGPIATSRDAGEQCTHGAAG-AGWGPGGSKFGVLTDAVSEEAVMEWFIEEVANYEPSDSGESAGRRLGKRHLRKILTAVGRDCLQGANDTGAKVNVLVSAVLPGANIRPAETSSASAGGLVRSP-VSAPTHDGNLQK------ILAELEALKADKEK 984
            G   + G AL+LMS +VPL+GGL    G AL+AGD Y        IT +APD VECC LAR LAL+LTDGL +   AT  D  +   +  AG +G G G     ++   +SEE V ++ +EEV   E +D G   G+RLGKRHLRK+L A+   CL G+N T  K+ +L+  +LP A+ +PA T       +VRSP   A  HD  L        I AEL ALK+ K+K
Sbjct:  477 GGMGKVGAALKLMSSAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSGCGRGAD---MMPGDMSEEDVFKYLLEEVTADERNDHG---GKRLGKRHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDK 699          
BLAST of mRNA_E_fasciculatus_S2_contig8129.16280.1 vs.
Match: Putative (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 2.100e-32
Identity = 102/227 (44.93%), Postives = 131/227 (57.71%), Query Frame = 1
Query:  346 GDTVQAGTALQLMSGSVPLVGGLAGFTGAALKAGDCY--------ITDLAPDAVECCKLARTLALRLTDGLPDGPIATSRDAGEQCTHGAAGAGWGPGGSKFGVLTDAVSEEAVMEWFIEEVANYEPSDSGESAGRRLGKRHLRKILTAVGRDCLQGANDTGAKVNVLVSAVLPGANIRPAETSSASAGGLVRSP-VSAPTHDGNLQK------ILAELEALKADKE 981
            G   +AG A++LMS +VP+VGGL    G AL+AGD Y        IT +A DAV+CC LAR LAL+LTDGL +   AT+ +A E      AG   G       +    +SEE V E+ +EEVA+Y+ +D G   G RLGK+HLRK+L A+ R  L G+N T  K+ VLV  +LP A+   A T S     +VRSP V  P HDG L        + A LEALK D+E
Sbjct:  527 GGMGKAGAAMKLMSSAVPVVGGLPELAGKALEAGDHYLQTRRLVKITAMASDAVDCCFLARRLALQLTDGLRNDAGATADNADEVRVDTTAGMNGGAD-----MTPGDMSEEDVFEYLLEEVASYKRNDHG---GVRLGKKHLRKLLKAIQRGSLDGSNGTEQKIEVLVLKILPEADTSLAATLSTPKEVIVRSPPVVTPAHDGGLPSRAEFTAMQAALEALKFDRE 745          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8129.16280.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
Uncharacterized1.310e-14573.33protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Leucine4.080e-4147.20rich repeat protein n=1 Tax=Ectocarpus siliculosus... [more]
Leucine2.840e-4047.20Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus... [more]
Putative1.020e-3846.26Leucine Rich Repeat Protein n=1 Tax=Ectocarpus sil... [more]
Putative3.110e-3744.75Leucine Rich Repeat Protein n=1 Tax=Ectocarpus sil... [more]
Uncharacterized3.160e-3746.12protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.280e-3643.50protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical2.420e-3544.10leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
Hypothetical2.500e-3343.67leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
Putative2.100e-3244.93Leucine Rich Repeat Protein n=1 Tax=Ectocarpus sil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8129contigE_fasciculatus_S2_contig8129:1162..5135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score159.5
Seed ortholog evalue1.8e-36
Seed eggNOG ortholog2880.D7FUA2
Model size1023
KEGG koko:K04730,ko:K04733
KEGG Pathwayko04010,ko04064,ko04620,ko04621,ko04624,ko04722,ko05133,ko05140,ko05142,ko05145,ko05152,ko05162,ko05164,ko05169,map04010,map04064,map04620,map04621,map04624,map04722,map05133,map05140,map05142,map05145,map05152,map05162,map05164,map05169
KEGG ModuleM00686
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0005911,GO:0009506,GO:0016020,GO:0030054,GO:0042995,GO:0044464,GO:0055044,GO:0071944,GO:0090406,GO:0120025
Exons10
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGs2QQYD@2759,COG4886@1
EC2.7.11.1
Cds size642
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8129.16280.1prot_E_fasciculatus_S2_contig8129.16280.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8129 1162..3720 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842474.187673-CDS-E_fasciculatus_S2_contig8129:1161..13711696842474.187673-CDS-E_fasciculatus_S2_contig8129:1161..1371Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8129 1162..1371 -
1696842474.204379-CDS-E_fasciculatus_S2_contig8129:2455..25481696842474.204379-CDS-E_fasciculatus_S2_contig8129:2455..2548Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8129 2456..2548 -
1696842474.2177825-CDS-E_fasciculatus_S2_contig8129:2676..27831696842474.2177825-CDS-E_fasciculatus_S2_contig8129:2676..2783Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8129 2677..2783 -
1696842474.2287655-CDS-E_fasciculatus_S2_contig8129:3345..35021696842474.2287655-CDS-E_fasciculatus_S2_contig8129:3345..3502Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8129 3346..3502 -
1696842474.239666-CDS-E_fasciculatus_S2_contig8129:3645..37201696842474.239666-CDS-E_fasciculatus_S2_contig8129:3645..3720Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8129 3646..3720 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842474.252284-UTR-E_fasciculatus_S2_contig8129:3720..37901696842474.252284-UTR-E_fasciculatus_S2_contig8129:3720..3790Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8129 3721..3790 -
1696842474.2701643-UTR-E_fasciculatus_S2_contig8129:4163..42151696842474.2701643-UTR-E_fasciculatus_S2_contig8129:4163..4215Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8129 4164..4215 -
1696842474.281695-UTR-E_fasciculatus_S2_contig8129:4241..43311696842474.281695-UTR-E_fasciculatus_S2_contig8129:4241..4331Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8129 4242..4331 -
1696842474.2923725-UTR-E_fasciculatus_S2_contig8129:4541..46131696842474.2923725-UTR-E_fasciculatus_S2_contig8129:4541..4613Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8129 4542..4613 -
1696842474.303287-UTR-E_fasciculatus_S2_contig8129:4821..48381696842474.303287-UTR-E_fasciculatus_S2_contig8129:4821..4838Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8129 4822..4838 -
1696842474.3126018-UTR-E_fasciculatus_S2_contig8129:5055..51351696842474.3126018-UTR-E_fasciculatus_S2_contig8129:5055..5135Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8129 5056..5135 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8129.16280.1

>prot_E_fasciculatus_S2_contig8129.16280.1 ID=prot_E_fasciculatus_S2_contig8129.16280.1|Name=mRNA_E_fasciculatus_S2_contig8129.16280.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=214bp
MSGSVPLVGGLAGFTGAALKAGDCYITDLAPDAVECCKLARTLALRLTDG
LPDGPIATSRDAGEQCTHGAAGAGWGPGGSKFGVLTDAVSEEAVMEWFIE
EVANYEPSDSGESAGRRLGKRHLRKILTAVGRDCLQGANDTGAKVNVLVS
AVLPGANIRPAETSSASAGGLVRSPVSAPTHDGNLQKILAELEALKADKE
KHNAELEALKAENK
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mRNA from alignment at E_fasciculatus_S2_contig8129:1162..5135-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8129.16280.1 ID=mRNA_E_fasciculatus_S2_contig8129.16280.1|Name=mRNA_E_fasciculatus_S2_contig8129.16280.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3974bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8129:1162..5135- (Ectocarpus fasciculatus EfasUO2)
ATTAGAAACCAAGTGGATATCGGCACAACCAGTGCTGGGGGAGCGCGTGG TAATGGAGGTCAGAGGACGATTGCCGCTTGGTAACGGAAACGCAGAGCTA ACATCAAGGTACCCGAATCTTGCATCGCCCGAACCACCGGAAAATCGACT GCACGTCAACGGACACGTTTTGCTCTCGCCACTGCAGGGGGACCTACGGA TGACGAGTCACTCTCGCAGTGGAAAGCCCGGCTGCGGAAAGAGTCTGCAA AGCAGAAACGGTCCAAAGAGAACATTGTCGAGCAGAGTCGGGTCCAGGAG CACGCAAGCTCGGAGTCGGGGGGGACAGCCCCCACTGCCGATGGACCGAT GTCCTCGTCAGGGGGGGGCGATACGGAGGGCGATACGGAGCACGCGTTTC GGGTGCAGGTGGCTTCCTTCCCAGAGCTGGAGGAGCTCACTCGAGAAAAC CGTGGACAGCTTGAGAACGTAAAACGCCTCCTCGGAAAACCTGTCGCTGA TACCGTTCGTCCCGGCACTGAGCTCACCGACGGGGAAAAGCTTCGGGAGC TGGACAGGCTGGTAGCAATGGCCAAGACTCTGGGCGAGATGGCGGTGAGT TTTCCGCTTTCTCAGTACGCAACAGTATCGGTGTGTCAGGGCTGAGTTTG GATAGAGTAGTCGTAGGAAGCATGGCAATTTGTACAAATACCCTTGCACG CGACTGCGGGCGTGCTCCCTCTCCTGGTCTTCTGCAAAGTACTTGGCGTA CCCAAAGGCTGTATTCGAGTTGACATTGCCATGCGATGCTATCCGAGTGC ACAGTCAAGGCACACCGAGGACGAGGGCTTACAGCTGAAGGAGGCGAGTT TAGCCCGGGGTCCTAAGGAGTACTACACGGCAATCAGAGGTGGCGTATGC AACGCCTATCTCGCGGCCAGCGTCGTCGGCAGCGGCTTGGTGTCGACGAG CAAAATCGGTGCCATCGGCAAGGTGGGTACCGTGGGTAGATGCTGCAAAT AGGTGCGCTGGCCGATGCGTTGCCCGGTCGGCCAAAACGTATCACGCCGA ATTTTTGATGGCGCGAAGGATAGGAGTTGAAACCCTACTGCAGCCGTGAC ACCACCGCGTAGCAATCACTTGTTGTTGAATACAGTATGCTAATGTCGAG TTCAACGTGGCAAAGGAAAGGATCGCTGCGCATCTCTCGCGATTTGTTTG TAGGCAAGGGCCCCGTTATATTGAAGAGAGTTCTGTGTGACACCGATAGG TACTCTCATCGTGTACCAGAGATACTGCCAGACGCGCCCAGAGTTGAAAA TTACTGGAAACTATAAAAAGCGACTGTTGTTTCTTGTGCATACAGCGTAT TGTGCCAATCAAAAAACAATCCGATTTATGGTGACACCGTGCAGGCAGGG ACGGCCTTGCAGCTCATGTCTGGCTCAGTGCCCTTGGTCGGCGGACTAGC TGGCTTCACAGGCGCAGCATTGAAGGCCGGGGACTGCTACGTTCAAACTC GACGGGTGGTGAAGGTGAAGTTGCCCTTGTGGTTGACGCCCCTCGGATTG CCACACTTGTGCTCGCATGTCCAAATGTGCGGTGACGTTGATGAACGCCA CGCAAGCCCACTTGTTTTGTCGTTGTTTGGCAGATCACCGATTTAGCACC GGATGCTGTTGAGTGTTGTAAGCTGGCGAGGACGCTGGCCCTTCGACTCA CCGACGGTCTTCCAGACGGCCCTATCGCCACGTCCCGCGATGCTGGAGAA CAATGCACGCACGGCGCAGCGGGTGCGGGCTGGGGGCCAGGTGAGGGAGA TAGGTGACAATGGTCCGAGGTCCAAGCGCTTCGTCCTTGACCCCTGGCCA ATCGTGCCTTGGCGCATGCAAGACTCTGCTGTGTGGTCCAAATCATCCCA TCAATGCAATATCATTGAACCTCGCCAAGGTTTGGTGGTCAAGATGTGCA GTATCACAAGTTGGTTGTACCCCGAGCCCCTCGATGACGTTCGGCAGACA TTCAGCTGCACATGTACAGGACGACCGGATCCACATGGCTCCGTGATGGG CTCCTGGATTGAACCGTGGGGGAGACTGCAGGATGTTGGGCAATCTGAGG GCATTCTCCTGGCTGTCGTGCGAACAGACGATCAAGCCGCACTGGGTGTG GACCTGGTTGGCCGCCGGCACATGAACACATGCTCACTCCCACGCACGAA CATGAAGAGAAGAAACTTGCGTTTCTCTGCCACTTTGTGTGTGTCGAACC CTCATTGCTGGCAAAGAACGCATCGCCTCGACCGAAGAACTGCGTTTCAT GGTACCAGGTATTGAGCACGGACGGAATGCGGTCGTGTTTCTCGCGTGCC AGGTGGATCCAAATTTGGCGTCTTGACAGACGCTGTGAGCGAGGAAGCCG TCATGGAGTGGTTTATCGAAGAGGTTGCGAATTACGAGCCAAGCGACAGC GGAGAATCGGTAAGACGCCGTGGTACAGTTGCGCCGTAGGCGCTGCGGCC TTGTTTCATCCACTGAACGCCGCTATTGTTGGTTGTGATATCCATATTTC TCTTAAAATTTTCTTGTGTGTTCCCATGTCCCTCCAGGCTGGGAGGCGGC TTGGGAAGCGACACCTGCGCAAGATTTTGACGGCAGTGGGTCGGGATTGC CTCCAGGGTGCGAACGACACCGGGGCAAAGGTACTACGCTTATCGGCGAA CGAACCGAACCGTCGTTTGTGGTTTGTCCTGCGCGTGACCCTCCGATGGT GCGATGGACGACGTTCTCCTTCGTTTTTGAGCAGCATCACGTGCGCGAAA ATTGATTTTGGTTAGGATCGACGACACTTCCACATCTCGCTCCGCAAGGG GGGAGATGAGAACGGCAATAAACTGATTTTTTCCCTATTTCTACATCCTA ATTGATGGGGGGAGACTGGAAAACGGCCCTCCGGCTTGTCTGGTTTCCGG ATCTGGAATGCTGCGTCAATGGTGGTAAATCTAAAGCAGAAGATCGCGTT GCTCCCGTGTTCCAATCCATAGAAAGAAGAACAATATACAGTCAAGAACT CATGCCTTTCCCCATTTAGCGGGACACTCACTTTTTCAGCCCCTCTCCCA GTTCGGGCGTTTGGACCCGGCTGAGCCCGTTTGGGTCAACATCTCGTGCT CCTCATGCATTTAGTGTCTTGGGACCAAAGTCGAGGGCCATGTCAAGCAA CTCATACCATCCATGCGAAGCTGGCGCTCTTTTTTTTTGCTTCGGAGAGG AGCAATGGTGTGCCATCGCATGTAGACTTGAGCCGTTTGCTGCTTCCCCA GGCAACTTGTTTCAGCTCTCGGGATGAAAGTTTCACATCTACAGGTTGAA GGCCCAGAATGAGCTCGATCGTGTAAAATTCGAGGGTGTTTACAATAGCT CCCTGGGTATATTAGTGGGCGCTATCTAGTGCATCTGCAAGCTGGATAGG ATTAGTGCCAGGGTTGCCACAATTTGCGTTCGTCACCACAGCGATGACAG TCGGCCTGCCAAAGTCGGAAATAACTGGTAGCAACCAACATTTCCCCAGA AACGCGCTATTGAGAAACGATCAAGAGCCTACCTCCAAGTTTACAATCCT GAAGTTCCTAGAGTCAGCCATATTTCCGAGTCGGCGGGCCTGTGGCCGAA CACGTTTAGTATAGATCTATCAGTGTTGGACAGTACGGCCCCAGCTATAT GAGTGTCTCCCGGCGTAAAGTGTCTTGAATTTGTGAAGATTTTTTCTTGT TCTCGGCGGTCCAGGTTAACGTGCTGGTATCGGCAGTTCTTCCCGGGGCC AACATCCGACCTGCCGAAACCTCGAGCGCATCGGCAGGAGGTCTTGTTCG ATCTCCCGTGTCAGCGCCAACCCACGACGGAAACTTGCAGAAGATACTGG CTGAGCTGGAAGCATTGAAAGCCGACAAGGAGAAGCACAACGCAGAGCTG GAGGCACTGAAAGCTGAAAACAAA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8129:1162..5135-

>mRNA_E_fasciculatus_S2_contig8129.16280.1 ID=mRNA_E_fasciculatus_S2_contig8129.16280.1|Name=mRNA_E_fasciculatus_S2_contig8129.16280.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=642bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8129:1162..5135- (Ectocarpus fasciculatus EfasUO2)
ATGTCTGGCTCAGTGCCCTTGGTCGGCGGACTAGCTGGCTTCACAGGCGC
AGCATTGAAGGCCGGGGACTGCTACATCACCGATTTAGCACCGGATGCTG
TTGAGTGTTGTAAGCTGGCGAGGACGCTGGCCCTTCGACTCACCGACGGT
CTTCCAGACGGCCCTATCGCCACGTCCCGCGATGCTGGAGAACAATGCAC
GCACGGCGCAGCGGGTGCGGGCTGGGGGCCAGGTGGATCCAAATTTGGCG
TCTTGACAGACGCTGTGAGCGAGGAAGCCGTCATGGAGTGGTTTATCGAA
GAGGTTGCGAATTACGAGCCAAGCGACAGCGGAGAATCGGCTGGGAGGCG
GCTTGGGAAGCGACACCTGCGCAAGATTTTGACGGCAGTGGGTCGGGATT
GCCTCCAGGGTGCGAACGACACCGGGGCAAAGGTTAACGTGCTGGTATCG
GCAGTTCTTCCCGGGGCCAACATCCGACCTGCCGAAACCTCGAGCGCATC
GGCAGGAGGTCTTGTTCGATCTCCCGTGTCAGCGCCAACCCACGACGGAA
ACTTGCAGAAGATACTGGCTGAGCTGGAAGCATTGAAAGCCGACAAGGAG
AAGCACAACGCAGAGCTGGAGGCACTGAAAGCTGAAAACAAA
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