mRNA_E_fasciculatus_S2_contig8120.16276.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8120.16276.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC4_ECTSI) HSP 1 Score: 820 bits (2117), Expect = 4.670e-293 Identity = 430/441 (97.51%), Postives = 433/441 (98.19%), Query Frame = 1
Query: 115 RALAELSDAEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESAGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDXXXXXXXXXXXXXXXERLLERTQHVKVWISYAQYEAKAELDTARAVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQKKGAGEDGLAGFKLGG 1437
RALAELSD+EKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEES GDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY +CLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWK XXXXXXXXXXXXXXX RLLERTQHVKVWISYAQYEAKAELDTAR VFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKT+GLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQKKGAGEDGLAGFKLGG
Sbjct: 230 RALAELSDSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKXXXXXXXXXXXXXXXXXXXXRLLERTQHVKVWISYAQYEAKAELDTARVVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTRGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQKKGAGEDGLAGFKLGG 670
BLAST of mRNA_E_fasciculatus_S2_contig8120.16276.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYM6_9STRA) HSP 1 Score: 540 bits (1391), Expect = 3.310e-184 Identity = 297/492 (60.37%), Postives = 350/492 (71.14%), Query Frame = 1
Query: 19 YVEAHPHSRAFLKWARWEDK-QSQYALARGVYERALAELSDAEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESAGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCP-KEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDXXXXXXXXXXXXXXXERLLE---------------RTQHVKVWISYAQYEAKAE--LDTARAVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQKKGAGEDGLAGFKLGG 1437
YV HP RAFLK+A+WE++ Q Q ALAR VYERAL EL +AEK E+L+ AFA FEER KE++R+RVIYKYALD +PRE++PELY+ F+ FEK+HG IE+V+++ RR QYEE SA PLDYD WFDY RLEE G+L REVYERAIAN+PPV EKRFWRRYIYLWINYALFEELQA + +R REVY+ACL V+PHK FTFAKIW++ A EVR KDL AARK++GQAIG CP KE LFK Y+QLE LGE++RCR +Y + LEA+PS C W A LE VGE ER RAV ELAI QP LDMPE LWK YID XXXXXX RT+HVKVWISYA YE E ++ ARAVF RGY HL+ Q LKEER+ LLEAWRA EK +G + L VE+K+P++ KK+RM+ G +G GWEEYYDY FPDDE +P+ L IL+ AQ WK D LA K GG
Sbjct: 158 YVVCHPTMRAFLKYAKWEERNQFQPALARVVYERALQELPEAEKGERLYVAFARFEERQKEYERSRVIYKYALDNLPREKIPELYQQFVAFEKKHGDRAAIEDVVVSKRRGQYEEALSADPLDYDVWFDYARLEEGQGELSAVREVYERAIANLPPVPEKRFWRRYIYLWINYALFEELQAGEVERAREVYKACLRVIPHKVFTFAKIWVLAAHLEVRCKDLGAARKLMGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWXXXXXXXXXXXXXXXXXXXXXXXXXXRTKHVKVWISYATYEGGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRAS--LAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWK-------DALAKAKAGG 640
BLAST of mRNA_E_fasciculatus_S2_contig8120.16276.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA95_9STRA) HSP 1 Score: 513 bits (1321), Expect = 1.400e-173 Identity = 280/429 (65.27%), Postives = 321/429 (74.83%), Query Frame = 1
Query: 112 ERALAELSDAEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESAGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDXXXXXXXXXXXXXXXERLLERTQHVKVWISYAQYEAKAELDTARA----VFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWK 1386
ERAL+EL + +TEKL+ +FA FEERCKE+DRARVIYKYALDQMPR+ VP+LYR+F GFEKR G+ GIE+ ++ RRLQYEE +A P YD WFDY RLEES GD +R REVYERA+A VPPV +KRFWRRY++LWINYALFEEL A+D R R V +ACL VVPH+SFTFAKIWLMLA EVR +DL AARKVLG AIG CPK KLFKGY+ LE LGEI+RCR +Y R L P DC W +FA LE ++GE ER+RAVFELAI QP LDMPE L XXXXXXXXXXXXXXX ERTQHVKVW SY +E VF RGY LR+ L+EERV LLEAWR EKA G L+ VE++MPR+ KK+RM+ G GE +GWEEYYDY+FPDDE PANLKILEMAQKWK
Sbjct: 228 ERALSELDEESRTEKLYISFAQFEERCKEYDRARVIYKYALDQMPRDLVPDLYREFAGFEKRRGTPSGIEDAVVGRRRLQYEEEVAADPHAYDTWFDYARLEESTGDGNRVREVYERAVACVPPVAQKRFWRRYVWLWINYALFEELAADDQARARAVLKACLQVVPHESFTFAKIWLMLAHLEVRARDLPAARKVLGNAIGRCPKGKLFKGYIALELQLGEIERCRTLYSRYLAWSPGDCAAWTRFAELERTLGEDERARAVFELAIAQPALDMPEALXXXXXXXXXXXXXXXXXXXXXXXXXERTQHVKVWASYGAFEXXXXXXXXXXXXXXVFERGYAALRQMDLREERVILLEAWRDMEKARSGGDAAALRAVEARMPRRLKKKRMLLGDQGEEVGWEEYYDYRFPDDEQAPANLKILEMAQKWK 656
BLAST of mRNA_E_fasciculatus_S2_contig8120.16276.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BXM5_9STRA) HSP 1 Score: 496 bits (1276), Expect = 4.600e-169 Identity = 259/474 (54.64%), Postives = 322/474 (67.93%), Query Frame = 1
Query: 1 RSVFQRYVEAHPHSRAFLKWARWEDKQSQYALARGVYERALAELSDAEK-TEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESAGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCP---KEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDXXXXXXXXXXXXXXX-----ERLLERTQHVKVWISYAQYEAK--AELDTARAVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQ 1389
R+VF+RY+ HP R++LK+ARWE+KQ Q A R +YERAL EL+D E+ +++LF+ LD + R+++PELY++FI FEK+ G GIEEVI+ RRLQYEE +A DYD WFDY+RLE++ GDLDRTR+V+ERAIA VPPVLEKRFWRRY+Y+WI+YALFEEL A+D +TR VY+A L V+PH F+FAK+W+M A FEVR KDLQAARK++GQAIG C KEK FK Y+ LER LGE+DRCR +Y + LE P++C W FA +FELA+ Q LDMPE LWK YID ERLL+RT+HVKVWISYA +EA +D R+V R+ Y L+ +GLK+ERV LLEAWRA EKA+ + + L EV MPRK KKRRM+TG NGE GWEEY+DYQFPDD P NLKILEMA KWK+
Sbjct: 19 RAVFERYITIHPTLRSYLKYARWEEKQEQVAFTRSIYERALIELNDEERESQRLFTLXXXXXXXXXXXXXXXXXXXXXLDHIGRDKMPELYQEFIQFEKKFGKKDGIEEVILGKRRLQYEEAVAADSHDYDTWFDYIRLEQAEGDLDRTRDVFERAIAQVPPVLEKRFWRRYVYIWIHYALFEELDADDMDKTRAVYQASLQVIPHSHFSFAKLWIMAAHFEVRQKDLQAARKLMGQAIGRCSLLGKEKPFKDYIHLERQLGEVDRCRTLYSKYLEVVPTNCAAWGHFAXXXXXXXXXXXXXXIFELAVGQQTLDMPEMLWKQYIDFEINDAKAEESGAGRVRELYERLLDRTKHVKVWISYATFEASEGGGIDDCRSVMRKAYGVLKDEGLKDERVVLLEAWRALEKAQP-IELQQLTEVSKLMPRKLKKRRMVTGDNGEDTGWEEYFDYQFPDDRVAPMNLKILEMAHKWKE 491
BLAST of mRNA_E_fasciculatus_S2_contig8120.16276.1 vs.
Match: Crooked (neck pre-mRNA splicing factor 1 n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8C7PZA1_ONCMY) HSP 1 Score: 490 bits (1261), Expect = 2.670e-164 Identity = 250/460 (54.35%), Postives = 319/460 (69.35%), Query Frame = 1
Query: 22 VEAHPHSRAFLKWARWEDKQSQYALARGVYERALAELSDAEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESAGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDXXXXXXXXXXXXXXXERLLERTQHVKVWISYAQYEAKAE----LDTARAVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQ 1389
V HP + ++K+AR+E+K A R V+ER++ + E LF AFA FEE+ KEF+R RVIYKYALD++P+ Q EL++ + FEK+ G +GIE+VI++ RR QYEE ASP +YD WFDYLRL ES D D REVYERAIAN+PP+ EKR WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PHK FTFAKIWL+ +FE+R K+LQAAR+ LG AIG CPK KLFKGY++LE L E DRCRK+Y + LE P +C W +F+ LE +G+TER+RA+FELAI QP LDMPE LWK+YID +RLL+RTQHVKVWISYAQYE + L R +F G LR KEER+ LLE+W+ E+ G T+ + V+ +P K KKRR +T +G GWEEYYDY FP+D NLK+L MA+ WK+
Sbjct: 165 VIVHPDVKNWIKYARFEEKHGYIAHGRKVFERSVEFFGEEHVNENLFVAFARFEEKQKEFERVRVIYKYALDRIPKHQAQELFKFYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYGQFEIRQKNLQAARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFAPENCTTWIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFDNTRGLYQRLLQRTQHVKVWISYAQYELSIDTSDRLQRCRGIFEEGNKGLRSCEEKEERLMLLESWKEFEQEFGSDTTR--ERVKKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKR 622
BLAST of mRNA_E_fasciculatus_S2_contig8120.16276.1 vs.
Match: Crooked (neck-like protein 1 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0Z386_ANAGA) HSP 1 Score: 483 bits (1242), Expect = 1.430e-163 Identity = 246/457 (53.83%), Postives = 315/457 (68.93%), Query Frame = 1
Query: 31 HPHSRAFLKWARWEDKQSQYALARGVYERALAELSDAEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESAGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDXXXXXXXXXXXXXXXERLLERTQHVKVWISYAQYEAKAELDT----ARAVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQ 1389
HP + ++K+A +E+K AL R V+ERA+ + +E L+ AFA FEE+ KEF+R RVIYKYALD++P++Q EL++++ FEKR G +GIE+VI++ RR QYEE ASP +YD WFDYLRL ES D D REVYERAIAN+PP+ EKR WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACL+V+PHK FTFAKIWL+ +FE+R K+LQ AR+ LG AIG CPK KLFKGY++LE L E DRCRK+Y + LE P +C W +FA LE +G+TER+RA+FELAI QP LDMPE LWK+YID +RLL+RTQHVKVWISYAQ+E + D R ++ + KEER+ LLE+WR E+ G K V +P K KKRR +T +G GWEEYYDY FP+D NLK+L MA+ WK+
Sbjct: 3 HPEVKNWIKYANFEEKHGYIALGRKVFERAVEFFGEDHISESLYVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADADTVREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLEVIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRLLQRTQHVKVWISYAQFEMSIDSDDRIQRCRQIYEEANKSMHGCEEKEERLMLLESWREFEEEFGSFANKD--RVRKLLPEKVKKRRKITAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKK 457
BLAST of mRNA_E_fasciculatus_S2_contig8120.16276.1 vs.
Match: (large (yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C34F081) HSP 1 Score: 479 bits (1233), Expect = 4.870e-162 Identity = 245/464 (52.80%), Postives = 317/464 (68.32%), Query Frame = 1
Query: 31 HPHSRAFLKWARWEDKQSQYALARGVYERALAELSDAEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESAGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDXXXXXXXXXXXXXXXERLLERTQHVKVWISYAQYEAKAE----LDTARAVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQKKGAGED 1410
HP + ++K+AR+E+K A +R VYERA+ + E LF AFA FEE KEF+R RVIYKYALD++P+ Q EL++ + FEK+ G +GIE+VI++ RR QYEE A+P +YD WFDYLRL E+ D D REVYERAIAN+PP+ EKR W+RYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PHK FTFAKIWL+ A+FE+R K+LQ ARKV+G AIG CPK KL KGY++LE L E DRCRK+Y + LE P +C W +FA LE +G+ ER+R +FELAI QP LDMPE LWK+YID +RLL+RTQHVKVWISYA++E + L R +F +R KEER+ LLE+W EK G T ++ V +P K KKRR +T +G GWEEYYDY FP+D NLK+L MA+ WK+++ E+
Sbjct: 3 HPEVKNWIKYARFEEKHGYIAHSRKVYERAVEFFGEEHVDENLFVAFAKFEETQKEFERVRVIYKYALDRIPKHQAQELFKYYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVENDADPDTVREVYERAIANMPPIQEKRHWKRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYAQFEIRQKNLQGARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDMERARGIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFGNTRNLYKRLLQRTQHVKVWISYAKFELSIDGPDRLQRCRQIFEEANKSMRNCEEKEERLMLLESWSDFEKEFGSEST--MERVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKRQQIVNEE 464
BLAST of mRNA_E_fasciculatus_S2_contig8120.16276.1 vs.
Match: Crooked (neck pre-mRNA splicing factor 1 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A7N6B4P7_ANATE) HSP 1 Score: 483 bits (1242), Expect = 1.570e-161 Identity = 247/474 (52.11%), Postives = 324/474 (68.35%), Query Frame = 1
Query: 1 RSVFQRYVEAHPHSRAFLKWARWEDKQSQYALARGVYERALAELSDAEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESAGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDXXXXXXXXXXXXXXXERLLERTQHVKVWISYAQYEAKAE----LDTARAVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQKKGAGED 1410
R+++++Y+ ++K+AR+E+K A +R VYERA+ + E LF AFA FEE KEF+R RVIYKYALD++P+ Q EL++++ FEK+ G +GIE+VI++ RR QYEE A+P +YD WFDYLRL ES D D RE+YERAIAN+PP+ EKR WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PHK FTFAKIWL+ +FE+R K+LQ ARKV+G AIG CPK KL KGY++LE L E DRCRK+Y + LE P +C W +FA LE +G+ ER+RA+FELAI QP LDMPE LWK+YID +RLL+RTQHVKVWISYA++E + L R ++ +R KEER+ LLE+WR EK G T+ + V +P K KKRR +T +G GWEEYYDY FP+D NLK+L MA+ WK+++ G D
Sbjct: 201 RTIYEQYILL----LNWIKYARFEEKHGYIAHSRKVYERAVEFFGEEHVDENLFVAFAKFEETQKEFERVRVIYKYALDRIPKSQAQELFKNYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADSDTVREIYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYGQFEIREKNLQGARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDIERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFGNTRNLYKRLLQRTQHVKVWISYAKFELSIDSPERLQKCRQIYEEANKSMRNCEEKEERLMLLESWRDFEKEFGSDSTR--ERVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKKQQVDGND 668
BLAST of mRNA_E_fasciculatus_S2_contig8120.16276.1 vs.
Match: Crooked (neck pre-mRNA splicing factor 1 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N6FI02_ANATE) HSP 1 Score: 481 bits (1238), Expect = 5.900e-161 Identity = 248/476 (52.10%), Postives = 326/476 (68.49%), Query Frame = 1
Query: 1 RSVFQRYVEAHPHSRAFLKWARWEDKQSQYALARGVYERALAELSDAEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESAGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDXXXXXXXXXXXXXXXERLLERTQHVKVWISYAQYEAKAE----LDTARAVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQKK--GAGED 1410
R+++++Y+ ++K+AR+E+K A +R VYERA+ + E LF AFA FEE KEF+R RVIYKYALD++P+ Q EL++++ FEK+ G +GIE+VI++ RR QYEE A+P +YD WFDYLRL ES D D RE+YERAIAN+PP+ EKR WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PHK FTFAKIWL+ +FE+R K+LQ ARKV+G AIG CPK KL KGY++LE L E DRCRK+Y + LE P +C W +FA LE +G+ ER+RA+FELAI QP LDMPE LWK+YID +RLL+RTQHVKVWISYA++E + L R ++ +R KEER+ LLE+WR EK G T+ + V +P K KKRR +T +G GWEEYYDY FP+D NLK+L MA+ WK+++ G GE+
Sbjct: 201 RTIYEQYILL----LNWIKYARFEEKHGYIAHSRKVYERAVEFFGEEHVDENLFVAFAKFEETQKEFERVRVIYKYALDRIPKSQAQELFKNYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADSDTVREIYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYGQFEIREKNLQGARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDIERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFGNTRNLYKRLLQRTQHVKVWISYAKFELSIDSPERLQKCRQIYEEANKSMRNCEEKEERLMLLESWRDFEKEFGSDSTR--ERVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKKQQVDGNGEN 670
BLAST of mRNA_E_fasciculatus_S2_contig8120.16276.1 vs.
Match: Crooked (neck pre-mRNA splicing factor 1 n=3 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5FH56_GADMO) HSP 1 Score: 480 bits (1236), Expect = 2.310e-160 Identity = 245/467 (52.46%), Postives = 324/467 (69.38%), Query Frame = 1
Query: 1 RSVFQRYVEAHPHSRAFLKWARWEDKQSQYALARGVYERALAELSDAEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESAGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDXXXXXXXXXXXXXXXERLLERTQHVKVWISYAQYEAKAE----LDTARAVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQ 1389
RS+++RY+ H+ ++K+AR+EDK A R V+ERA+ + E+LF AFA FEE KE +R RVIYKYAL+++P+ Q EL++++ FEK+ G +GIE+VI+N RR QYEE A+P +YD WFDYLRL ES + D R+VYERAIAN+PP+ EKR WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PHK FTFAK+WL+ ++FE+R K+L AAR+ LG AIG CPK KLFKGY++LE L E DRCRK+Y++ LE P +C W +FA LE +G+ ER+RA+FELAI QP LDMPE LWK+YID +RLL+RTQHVKVWIS+A++E E L +R ++ +R KEER+ L+EAWR E A G + L+ V +P K KKRR +T +G GWEEYYDY FP+D NLK+L MA+ WK+
Sbjct: 200 RSIYERYIL---HN--WIKYARFEDKHGYIAHGRRVFERAVEFFGEEHVDERLFVAFARFEEMQKEMERVRVIYKYALERIPKTQAQELFKNYTMFEKKFGDRRGIEDVIVNKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADAVRDVYERAIANMPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKMWLLYSQFEIRQKNLPAARRGLGSAIGKCPKNKLFKGYIELELQLREFDRCRKLYQKYLEFSPENCSTWIKFAELETILGDVERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFDHTRDLYQRLLQRTQHVKVWISFAKFELSVEAPQRLQRSRQIYEEANKSMRSCEEKEERLMLMEAWRDLEAAFGSDED--LERVSKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKR 659 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8120.16276.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8120.16276.1 >prot_E_fasciculatus_S2_contig8120.16276.1 ID=prot_E_fasciculatus_S2_contig8120.16276.1|Name=mRNA_E_fasciculatus_S2_contig8120.16276.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=492bp RSVFQRYVEAHPHSRAFLKWARWEDKQSQYALARGVYERALAELSDAEKTback to top mRNA from alignment at E_fasciculatus_S2_contig8120:620..6959+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8120.16276.1 ID=mRNA_E_fasciculatus_S2_contig8120.16276.1|Name=mRNA_E_fasciculatus_S2_contig8120.16276.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6340bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8120:620..6959+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8120:620..6959+ >mRNA_E_fasciculatus_S2_contig8120.16276.1 ID=mRNA_E_fasciculatus_S2_contig8120.16276.1|Name=mRNA_E_fasciculatus_S2_contig8120.16276.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1476bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8120:620..6959+ (Ectocarpus fasciculatus EfasUO2)back to top |