|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8114.16272.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU8_ECTSI) HSP 1 Score: 730 bits (1885), Expect = 5.090e-242 Identity = 588/801 (73.41%), Postives = 603/801 (75.28%), Query Frame = 1
Query: 601 KAPPARSVSSPLMVRDEMFSSAEIXXXXXXXXXXXXXXXXXXXXXXXXXXX--GTLRNLLSSLLHKRVSERTTVREAQDHPWMRRMAPRKGGDGAGLDGRGAGTRRGQPPPFQQVSVTAGEVKGAIVHINSLFVISMVKSRLTQRLTRARKNIARRRQQATTGNKYGPSLSDTEQEHLREVRELTEALTKDEAVLINHDLANEPERSLSDSDLPTATCSGTWGDRNGERATRDGDGGTRSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRSXXXXSRSRSXAXXXXXXXXXXXXXXXXXHHSSRRSPSSPSSTSTALPYQLYARSASRVAGRAGVHDAITNFFGTPGAGGAGGSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SGGVAGLTGLTSLSKSLSNQLPGTSAPPXXXXXXXXXXXXXASGFGPAWPISGLLSMSRNASGDSVVGLDGSGGHGVNRRMASSGELFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEGSKSRAKMYSRARSIRSVASTRGFDSSXXXXSCSFSSDFTPSDEDXXXXXXXXXXXXXXXXXRSSEVSERES---REKDALS-MLRYANRSMANFGSEGSSPAGNNQRRTRGSFRVFGIKRRTLKIKQQIPKMSRMSISRSGSXXXXXXXXXXXXXXXAGRHPDPVVDDGVGIRGMVMAVPMERKLMSDSPSRISGRLSGGVLGMKRGGGGAGPRHGKSPGRPVDDSGISGGTPPGDGGARRWR 2976
KAPP RSVSSPLM+RDEMFSSAEI GTLRNLLSSLLHK+VSERTTVREAQ+HPWMRRMA RKGGDGAGLDGRG GTRRGQPPPF+QVSVTAGEVKGAIVHINSLFVISMVKSRLTQRLTRARKNIARRRQQATTG++YGPSLSDTEQEHLREVRELTEALTKDEAVLINHDLANEPERSLSDSDLPTATCSGTWG RN E AT GDGG RSD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXX HHSSRRS S PS TS ALPYQLYARSASRVAGRAGVHDAITNFFG PG G GGSVPAXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SGGVAGLTGLTSLSKSLSNQLPGTSAPPXXXXXXXX A GFGPAWP+SGL+S+ R+ASGDSVVGLDGSGGHGV RR A SG LFP XXXXXXXXXXXXXXX G + SSDFTPSDEDXXXXXXXXXXXXX RSSE+SERE R+KDALS MLRYANRSMANFGSEGSSPAGNNQR TRGSFRVFGIKRRTLKIKQQIPKMSRM ISRSGS AGRH DPVVDDGVGIRGMVMA+PMERKLMSDSPSRISGRLSGGVLGMKRGGG AGPR GKSPGR DDSG+SGGTPP DGG RRWR
Sbjct: 595 KAPPTRSVSSPLMIRDEMFSSAEITGRRRMGGTGSGTVGEKDPAAAAAAAATPGTLRNLLSSLLHKKVSERTTVREAQEHPWMRRMASRKGGDGAGLDGRGGGTRRGQPPPFKQVSVTAGEVKGAIVHINSLFVISMVKSRLTQRLTRARKNIARRRQQATTGDRYGPSLSDTEQEHLREVRELTEALTKDEAVLINHDLANEPERSLSDSDLPTATCSGTWGSRNSEHAT--GDGGIRSDDDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------XXXXXXXXXERHHSSRRSTSGPS-TSAALPYQLYARSASRVAGRAGVHDAITNFFGAPGGAGDGGSVPAXXXXXXXXXXGYRARGGGGDPRGEKGRSSRTHSKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGVAGLTGLTSLSKSLSNQLPGTSAPPXXXXXXXXAVP--AFGFGPAWPLSGLVSLQRDASGDSVVGLDGSGGHGVTRRTAGSGGLFPPPSEAAEGGGQEEGQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG----------TLSSDFTPSDEDXXXXXXXXXXXXX----RSSELSEREXXXXRDKDALSSMLRYANRSMANFGSEGSSPAGNNQR-TRGSFRVFGIKRRTLKIKQQIPKMSRMGISRSGSNGRREREGRSGAA--AGRHSDPVVDDGVGIRGMVMAMPMERKLMSDSPSRISGRLSGGVLGMKRGGG-AGPRSGKSPGRRADDSGVSGGTPPDDGGTRRWR 1351
BLAST of mRNA_E_fasciculatus_S2_contig8114.16272.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG3_9PHAE) HSP 1 Score: 514 bits (1325), Expect = 3.380e-158 Identity = 608/1123 (54.14%), Postives = 636/1123 (56.63%), Query Frame = 1
Query: 1 SPGQLPALGSRQFGGGRDFDDGNGGGGGTHVPNGRGSTRRANSNSPAVHAPLRRSQSXXXXXXXXX--------RGRRSVWDTGSXXXXXXXXXXXXXXXXXIRSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVSTVAP----------TAXXXXXXXXXXXXXXXXXXXXXXXXXISAASGVPTPDRRAASSAGVGRSXXXXXXXXXXXXK----------------------------------------------------------------------------------------------------------------APPARSVSSPLMVRDEMFSSAEIXXXXXXXXXXXXXXXXXXXXXXXXXXX--GTLRNLLSSLLHKRVSERTTVREAQDHPWMRRMAPRKGGDGAGLDGRGAGTRRGQPP-PFQQVSVTAGEVKGAIVHINSLFVISMVKSRLTQRLTRARKNIARRRQQATTGNKYGPSLSDTEQEHLREVRELTEALTKDEAVLINHDLANEPERSLSDS---DLPTATCSGTWGDRNGERATRDGDGGTRSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRSXXXXSRSRSXAXXXXXXXXXXXXXXXXXHHSSRRSPSSPSSTSTALPYQLYARSASRVAGRAGVHDAITNFFGTPGAGGAGGSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SGGVAGLTGLTSLSKSLSNQLPGTSAPPXXXXXXXXXXXXXASGFGPAWPISGLLSMSRNASGDSVVGLDGSGGHGVNRRMASSGELFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEGSKSRAKMYSRARSIRSVASTRGFDSSXXXXSCSFSSDFTPSDEDXXXXXXXXXXXXXXXXXRSSEVSERESREKDALS-MLRYANRSMANFGSEGSSPAGNNQRRTRGSFRVFGIKRRTLKIKQQIPKMSRMSISRSGSXXXXXXXXXXXXXXXAGRHPDPVVDDGVGIRGMVMAVPMERKLMSD----SPSRISGRLSGGVLGMKRGGGGAGPRHGKSP----GRPVD 2919
SPGQLPALGSRQFGGGRDFDDG+GGGG THVPNGRGSTRR + SPAVH PLRRS S XXXXXXX R RRSVWDTGSXXXXXXXX ++ D S P +A XX + AA G+P XXXXXXXXXXXX APP RSVSSPLMVRDEMFSSAEI GTLRNLLSSLLHK VSER TVREAQ+HPWM+RMA RKGG GAGL RG GTRRGQ P PF+QVSVTAGEVKGAIVHINSLFVISMVKSRLTQRLTRARKNIARRRQQATTG+KYGPSLSDTEQE LREVRELTEALTKDEAVLINHDLANEPERS+ + D +G WG RN ERAT GDGG RSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX S + STSTALPYQLYARSASRVAGRAG+HDAITNFFG P G GG V XXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SGGVAGLTGLTSLSKSLSNQLPGTSAP ASGFGPAWP+SGL+S+ RNASGDSVVGLDGSGGHGV+ R A SG LFP XXXXXXXXXXXXXXXXXXX XXXX XXXXXXXXXXXXXX R SE+SERE REKDALS +LRYANRSMANFGSEGSSPAGNNQR TRGSFRVFGIKRRTLK+ K+ GS AGRH DPVVDDGVGIRGMVMA+PMERKLMS SP ++ +R AGP G SP G PVD
Sbjct: 436 SPGQLPALGSRQFGGGRDFDDGSGGGG-THVPNGRGSTRRVDPKSPAVHVPLRRSHSSSXXXXXXXXXXXXXXXRARRSVWDTGSXXXXXXXXGMDGIEHRGTKTPDTVEVPPTPKSRTIPPDQGWFGRRPSSGNNNH---SNNRPQRSDSGASDKSAWSAARSRHGSASSALSXXADAATSVVHAAVGLPLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPTRSVSSPLMVRDEMFSSAEITGRRRIGGTGSGTVGEKDPAAAAAAAATPGTLRNLLSSLLHKNVSERATVREAQEHPWMQRMASRKGGGGAGLGDRGGGTRRGQQPMPFKQVSVTAGEVKGAIVHINSLFVISMVKSRLTQRLTRARKNIARRRQQATTGDKYGPSLSDTEQEALREVRELTEALTKDEAVLINHDLANEPERSVRGNRCGDRRDGFGAGAWGGRNSERAT--GDGGIRSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGA-------------------------------STSTALPYQLYARSASRVAGRAGIHDAITNFFGAPA--GDGGRVXXXXXXXXXVSSGYRSWGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSGGVAGLTGLTSLSKSLSNQLPGTSAP--------AAPPVPASGFGPAWPVSGLVSLPRNASGDSVVGLDGSGGHGVSTRTAGSGGLFPPPSAAAEGRGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXDGDRFSELSEREEREKDALSSVLRYANRSMANFGSEGSSPAGNNQR-TRGSFRVFGIKRRTLKM-----KVGGWREREGGSGAA------------AGRHSDPVVDDGVGIRGMVMAMPMERKLMSGLEMGSPRAGLWTIAASTAARRRAT--AGPGGGDSPWKTGGAPVD 1479
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 742.3 |
| Seed ortholog evalue | 2.7e-211 |
| Seed eggNOG ortholog | 2880.D7FNU8 |
| Model size | 2994 |
| KEGG ko | ko:K07359 |
| KEGG Pathway | ko04140,ko04152,ko04211,ko04920,ko04921,ko05034,map04140,map04152,map04211,map04920,map04921,map05034 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| EggNOG free text desc. | peptidyl-threonine phosphorylation |
| EggNOG OGs | KOG0585@1,KOG0585@2759 |
| Ec32 ortholog description | Calcium/calmodulin-dependent/calcium-dependent protein kinase |
| Ec32 ortholog | Ec-12_003290.1 |
| EC | 2.7.11.17 |
| Cds size | 2718 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01001 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842472.690356-UTR-E_fasciculatus_S2_contig8114:156..417 | 1696842472.690356-UTR-E_fasciculatus_S2_contig8114:156..417 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig8114 157..417 + |
| 1696842472.8138168-UTR-E_fasciculatus_S2_contig8114:6710..6725 | 1696842472.8138168-UTR-E_fasciculatus_S2_contig8114:6710..6725 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig8114 6711..6725 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842472.702327-CDS-E_fasciculatus_S2_contig8114:417..424 | 1696842472.702327-CDS-E_fasciculatus_S2_contig8114:417..424 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8114 418..424 + |
| 1696842472.7125762-CDS-E_fasciculatus_S2_contig8114:757..1425 | 1696842472.7125762-CDS-E_fasciculatus_S2_contig8114:757..1425 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8114 758..1425 + |
| 1696842472.7226655-CDS-E_fasciculatus_S2_contig8114:1846..2029 | 1696842472.7226655-CDS-E_fasciculatus_S2_contig8114:1846..2029 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8114 1847..2029 + |
| 1696842472.7324564-CDS-E_fasciculatus_S2_contig8114:2519..2615 | 1696842472.7324564-CDS-E_fasciculatus_S2_contig8114:2519..2615 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8114 2520..2615 + |
| 1696842472.7485201-CDS-E_fasciculatus_S2_contig8114:3087..4238 | 1696842472.7485201-CDS-E_fasciculatus_S2_contig8114:3087..4238 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8114 3088..4238 + |
| 1696842472.7635355-CDS-E_fasciculatus_S2_contig8114:4625..4884 | 1696842472.7635355-CDS-E_fasciculatus_S2_contig8114:4625..4884 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8114 4626..4884 + |
| 1696842472.7802336-CDS-E_fasciculatus_S2_contig8114:5572..5755 | 1696842472.7802336-CDS-E_fasciculatus_S2_contig8114:5572..5755 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8114 5573..5755 + |
| 1696842472.7962773-CDS-E_fasciculatus_S2_contig8114:6539..6710 | 1696842472.7962773-CDS-E_fasciculatus_S2_contig8114:6539..6710 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8114 6540..6710 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8114.16272.1 >prot_E_fasciculatus_S2_contig8114.16272.1 ID=prot_E_fasciculatus_S2_contig8114.16272.1|Name=mRNA_E_fasciculatus_S2_contig8114.16272.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=906bp
MDRGSGGIRSSDRRTGGGGSGGGDYNKKQLPRRSSNLRSDSSGGMVSTVA
PTATPSTSSGTATTATAPSFFSSSPSMTISAASGVPTPDRRAASSAGVGR
SSIRGGGGGGGGGKAPPARSVSSPLMVRDEMFSSAEITGRRRVAGTGSGS
VGEKAPAAAVAATPGTLRNLLSSLLHKRVSERTTVREAQDHPWMRRMAPR
KGGDGAGLDGRGAGTRRGQPPPFQQVSVTAGEVKGAIVHINSLFVISMVK
SRLTQRLTRARKNIARRRQQATTGNKYGPSLSDTEQEHLREVRELTEALT
KDEAVLINHDLANEPERSLSDSDLPTATCSGTWGDRNGERATRDGDGGTR
SDDGGGGGGGRQRDRRHGDRRAGGGGGGGGGGGGGGRSRSGGGGSRSRSG
AGAGGSGGRSRGSGAGGRHHSSRRSPSSPSSTSTALPYQLYARSASRVAG
RAGVHDAITNFFGTPGAGGAGGSVPAGGGGDPRAEKERSSRTRSRGGRRR
RSREKPTAAEEEEEAIRMATAAAAAAAAAGGASAFEEEAPPSGGVAGLTG
LTSLSKSLSNQLPGTSAPPPPPPPAPLAPAVPASGFGPAWPISGLLSMSR
NASGDSVVGLDGSGGHGVNRRMASSGELFPPPSEAAGGREQEEEEGVTEA
PAAAAAAAAAAAGAEGSKSRAKMYSRARSIRSVASTRGFDSSSGSDSCSF
SSDFTPSDEDDDDDDDYDDEYYDDDDDRSSEVSERESREKDALSMLRYAN
RSMANFGSEGSSPAGNNQRRTRGSFRVFGIKRRTLKIKQQIPKMSRMSIS
RSGSNSRREREGGGSGAAAAGRHPDPVVDDGVGIRGMVMAVPMERKLMSD
SPSRISGRLSGGVLGMKRGGGGAGPRHGKSPGRPVDDSGISGGTPPGDGG
ARRWR* back to topmRNA from alignment at E_fasciculatus_S2_contig8114:157..6725+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig8114.16272.1 ID=mRNA_E_fasciculatus_S2_contig8114.16272.1|Name=mRNA_E_fasciculatus_S2_contig8114.16272.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6569bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8114:157..6725+ (Ectocarpus fasciculatus EfasUO2)
AGCCCGGGGCAACTCCCGGCGTTGGGTAGCCGACAATTTGGCGGCGGCCG
CGACTTCGACGACGGCAACGGTGGCGGCGGCGGCACGCACGTGCCCAACG
GACGAGGGTCGACCAGGCGGGCCAACTCCAACTCCCCCGCCGTCCACGCC
CCGCTTCGACGATCCCAGTCAAGCAGCCACGGGGGAGGGGGCGGTAGCAG
GGGGAGAAGAAGCGTCTGGGATACCGGCAGCGGCGGCGGCGTGCGGGCGG
GCGGCGGCGGGATGGATAGTATCGAGCAGCGCGGGACGAAAAACACGCCG
CTTACGTTGGAGGTGCCGCCGACGCCCAAATCCCGGACGATTCCCCCGGA
CCAGGAGTGGTTCGGTCGTCGGCCGAGCAGTGGTAACAGCAGCAGCAACA
ACAACCGGGCGCAGCGGTCGGGCTCGGGCGCCTCCGACAAGAGCGCGCGG
TCCGCCACGAGGTCCCGGCACGGCTCTGCGTCGTCCGCCTTCTCCGCCGC
GGCAGACGCCGCCATGTCGGCGGTGCTCGCGGCCGTGGGCCCCCCTCTCG
CTGGCGGCGGGGGAGGGGGCGGCGGCGGCAGCAGCAACGCCCCCGGTCGA
GGAGGCAGCGGCGGCATCAGGAGCAGCGACAGGCGAACCGGCGGCGGCGG
CAGCGGCGGCGGCGACTACAACAAGAAGCAGCTGCCCCGGCGGAGCTCGA
ACCTGAGGTCGGACTCCTCCGGGGGTATGGTCTCGACCGTTGCTCCGACG
GCGACGCCTTCGACATCCTCGGGTACGGCGACCACCGCCACCGCGCCGTC
CTTCTTCTCGTCGTCCCCTTCGATGACGATATCGGCGGCGTCGGGGGTAC
CCACCCCGGACCGGCGGGCGGCGTCTAGCGCGGGTGTCGGCCGCAGCAGC
ATCAGGGGCGGCGGGGGCGGCGGCGGCGGTGGCAAGGCCCCGCCGGCCCG
ATCGGTGTCGTCGCCGCTCATGGTGCGCGACGAGATGTTCTCCTCGGCAG
AGATCACGGGTCGTCGGAGGGTAGCGGGGACGGGGAGCGGGAGCGTGGGA
GAGAAGGCCCCGGCGGCGGCGGTAGCGGCGACACCGGGGACTCTCCGCAA
CCTGCTGTCGTCGTTGCTGCACAAGAGGGTGTCGGAGAGGACCACGGTGC
GGGAGGCCCAGGACCACCCGTGGATGCGGCGGATGGCCCCGAGGAAGGGC
GGGGACGGCGCCGGGTTGGACGGGCGAGGGGCAGGCACGAGGCGGGGTCA
GCCCCCGCCGTTCCAGCAGGTGTGGTTGGTTGACTCCGCGTTGCTATTGG
CTGTAGCTGTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTTGTTATCTCA
CCTGTGTTTGGTCTCGTGGCCTAGGTGTGTGTGTCACCTGACGATTGTTG
GCTGCAGGGTGGGCGGGTGGTATGGCACGCGGCATGTGTGTACCTGGTTT
GGTACCTGGTTTGATTTTGTCGTGCGTGTGCAGGTGGGTGGGTGGTCGGG
GGGAGGCGGGAAATGCTGTCAGCTAGCTCGAAGCTTTGGTGACGACTTGT
GTTTTGTCTGGCCCTCCCGTCCCATGTGAATGGTTTTCTCTCAAGTCGGG
TGTTTACGCTTTTCGCTGCTGTTGGGCAGTTATCATCCAATGCCCGATGT
TGTCGACTGATTTTGCGAAACACAAACGCGATACGAACAGGTGTCGGTCA
CGGCAGGCGAGGTAAAGGGAGCGATCGTCCACATCAACAGCCTCTTCGTC
ATCTCGATGGTGAAGAGCAGGCTCACGCAGCGCCTCACGAGGGCGCGGAA
GAACATCGCGCGGCGACGGCAGCAGGCCACCACAGGCAACAAGTACGGCC
CGAGCCTGTCGGACACCGAACAGGTGCGTTGGATTGATGGGCGTGCTTGC
TGTCTTTGCGTGTGAAGATTTTTTTTTTCAGTGCTTCTGTTTTGGTGTCG
TTTCTCAACTGGAGTCTTCGAGCCTGTCTTTTTCGTGGCGGCTGAGTCTT
TATCTCTCTCTTTGTTATCTCTCTCGCGACGGGAGCCATCGGGCAGCCGC
TGCTGTTGCTGTGTCACATGTGGCTGCCTTGTATTGAGTGGTGGTGGTAG
TGGTGGCGTGGCTCCATCGTATTGGTGGTGGTCGTGGACACGCGGCGTGT
GGGATGATTGTGAATCTCTCGCGATTTTCGATGATTGTGATCCCCTCTCG
CCACAACCTTGGTGTTGAGGTCAATCTCGACGCTAACGAACCCTAGTGAG
CAAGCGCCTCAACGTTAACGTCGACAGACAGCCCAACGGCACCCGTCCTT
CGTCACTGCGGGGTCCACGTGAAACGTTTGCCAAACGGTCGCGTTGTCGT
TGTCGTTGAACAGGAACACCTGAGAGAGGTCCGAGAACTTACCGAGGCCC
TCACCAAGGACGAGGCGGTGCTTATCAACCACGACCTCGCCAACGAGCCA
GAGCGATCGGTGAGGGAACAGAATGTTGCGATGGCCATGGCGTTTTTGGC
CCGTGAATGTCGTGAAATGGTGTGTAAAATGGACCATGGGCGCGATCGAA
GGAGACGGAGATCGGAAGCCAACGGCTTGGACAATTACAATTACCACACG
GTACCAGTGTTTAGTGTATCTCACGTGTCACCTTTGCACCGCCTCTGTAA
GCGGTCGCCGGCTTCGTACATGAGATGGCCGAGGTCGGACGGGCACCCGG
CGCGAAACCACACAGTGTCTGCCGTTGCTGCCCCTTCCCCAAGAGCCCGA
TCCTGGCACGCCGACAGGCCCACTCTCTGCGCGTGTGTGTTTTCTCCGCG
AATCAAGCACCCAACGTACAGCAGCAGCAGTGCTCTGAAGGATGCCAACC
CGCCCCGCCCTCGTGGTCTCGACGTTGCACCCGACCCCCTTTTGTTTTTC
ACCCGGTTCCGGTTCCGATCCGGGTACACAGCTGTCAGACAGCGATTTGC
CCACGGCGACGTGCAGCGGCACCTGGGGAGACCGAAACGGCGAGCGTGCC
ACCAGGGATGGGGATGGCGGGACCAGAAGCGACGACGGTGGTGGTGGTGG
TGGTGGTCGGCAACGCGACCGTCGCCATGGTGACCGTCGCGCTGGCGGTG
GCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCGTAGTCGCAGTGGC
GGCGGCGGAAGCCGTAGTCGGAGCGGGGCCGGCGCTGGCGGCAGCGGTGG
ACGTAGTCGCGGCAGCGGTGCCGGCGGGCGTCATCACAGCAGTCGCCGCA
GCCCCAGCAGCCCAAGCAGCACCAGCACCGCGCTGCCCTACCAGCTTTAC
GCTCGCTCGGCGTCTCGCGTGGCCGGTCGCGCGGGCGTCCACGACGCGAT
CACCAACTTCTTCGGCACCCCCGGCGCGGGCGGCGCCGGCGGTAGCGTCC
CCGCGGGCGGCGGCGGCGACCCCAGGGCCGAGAAAGAACGGTCCTCGAGG
ACCCGCAGCAGAGGTGGGAGGCGTAGGCGCTCACGAGAGAAGCCGACGGC
GGCGGAGGAGGAGGAGGAGGCTATCCGCATGGCGACCGCGGCGGCTGCGG
CTGCGGCCGCGGCGGGTGGAGCGTCGGCCTTCGAGGAGGAGGCGCCGCCC
AGCGGTGGCGTGGCCGGCCTGACGGGGCTCACGTCGCTCTCAAAGAGCTT
GTCGAACCAGCTGCCGGGGACCTCGGCGCCGCCGCCGCCGCCGCCGCCGG
CCCCGCTGGCGCCTGCGGTGCCGGCCTCCGGCTTCGGCCCCGCGTGGCCG
ATATCGGGGCTCCTTTCGATGTCGAGAAACGCGTCGGGGGACAGCGTCGT
TGGCCTTGATGGCAGTGGCGGCCACGGCGTTAATAGAAGGATGGCGAGTT
CCGGTGAGTTGTTTCCGCCGCCGTCGGAGGCCGCGGGAGGAAGGGAGCAG
GAGGAGGAGGAGGGAGTCACGGAAGCACCGGCGGCGGCGGCGGCGGCGGC
GGCGGCGGCGGCGGGGGCGGAGGGGTCGAAGTCGCGAGCGAAGATGTACT
CGAGGGCCCGGTCGATACGGTCCGTCGCGAGCACCCGAGGCTTCGACAGC
TCGTCGGGATCGGACTCTTGTTCTTTCAGCAGGTACAGAGATGGGTGCAA
CGGTTTTGGTTGTAGATGCACGTGTTGGTTTCCTCCGGCAGAACACGCCA
ACACACTTTGAAGAAACGGCTCTGGGTCGCTCAGCAGGTGACGCGATACA
ACGGTTAGGTACACTGGTTTGTTGGTCCTGCGGCAACTAACTCAAGTCCA
AAACATCGGTGCCCCCCCCCCCCCCCCCTAGTCATCAGGGGGGCCACCTC
AAAATTCGCGAACGCTATCTCTGTGGTGTGGTGACGTTTTTTATTTAATT
GTGCTACGAAATGGCCGGCGACCGACCGCGCGACACTTCGAGCCAGTTAA
AGGGCCGACCTACGATCCACCACATCCCTGACCGAACACCAACCAACCCG
ATTTTCAACGCAAACCCAGCGACTTCACTCCCAGCGACGAAGACGACGAC
GACGACGACGACTACGACGACGAGTACTACGACGACGACGACGACCGCTC
CTCCGAGGTGTCCGAGAGGGAGAGTAGGGAGAAGGACGCCCTCAGCATGC
TCCGGTACGCGAATAGAAGCATGGCCAACTTCGGCAGCGAGGGCAGCAGT
CCGGCCGGAAACAACCAGCGGCGGACCCGGGGTAGCTTCCGGGTGTTCGG
CATCAAGCGTCGCACCCTCAAGATCAAGGTGGGTGGGTAGTAGGTCAGAG
GGCGGCGGCGGCGGCGGTGGGAGGGTAGATACGAGGCAAAGGGTTACTAC
TGCTTCTGTTGTTGTCGTGGTCTTCACGAAAAATAACCGTGGGCGGTGTT
GTTTGAGAACGTAGGTTGTGTTGGTTTGCGGTTGACGCCGAAGACTTTCC
ATGTGGTAGGTACGGTAGCTCTTGTGTGGTTGTATCCCTCTGCGTCCTTC
GTTTTTCGCTCCCCCTTTCCCGTGTGTGTGTGTGTTTGCTTTTGTTAACA
CGATGTGAGCCAACGTCGTGGTTGGCCTCCTCAAACTGGTGCAATCACAA
GTACTGCTGTAGTCCGGTAGAGGGATGAAGGTTGTATTTCGCCACGTGTC
CTGACCACAGCAGTAGGTTTTGTTGTTGTCGTCCCACCTATTCCCACCGC
GTGGTCTCGCTCTCTCTGTGTGTCTGTTTGTCCCTCTCTCTATCTGATCA
GATGCTATCGTATGTGCCCGAGGGAACGAAGACCCCGCTTCCAATGCTGC
TGCCTCTTGCGTGTGGTCTCGACTATGATATCTTCACTTTTTTTGCTCAC
CCCTCTCTCCCACCCCCCGCTCTACTCTCTCTCTCCCTTCCTCTCTCTCT
CTCTCTCCGCGTCTCTCTCTCTCTTTCTCCCTCTTTCGTGTGCAACCCAC
CTCCTCCGTTGTGCAGCAACAAATACCCAAGATGTCGCGCATGAGCATTT
CCCGCAGCGGCAGCAACAGCAGACGAGAGCGAGAGGGAGGGGGAAGCGGG
GCGGCAGCAGCAGGTCGCCATCCGGACCCGGTGGTCGACGATGGCGTCGG
CATCAGAGGGATGGTCATGGCGGTGCCCATGGAGCGCAAGCTGATGTCGG
TAAGAGGTGGTGGCCATCGTGATCGCAAAGTCGTCGATCGCCAGCTGTCG
GCGGAACTCGATGTGTGACGGACAAGCCTTTTCTTTTCTTTTCTTTTCCA
ACGTGTGTTGCAACCCTGTTCGGGGGTATTTTCGCCTATGACCGCGGAAG
GATTGAGAGTCGTCAGTTGGATCGGTAGGGATGTTCGATTCGAGTCAGTT
GCGGTACGGGCGTTCGGCGGTGCTGGGCAGAGGTATAGATTGCAGTAACA
ACATGAGTCATGTGCCAACGTCTTTGTGGTCCTGGTCTTCTTTCTGTCGA
ATATAGTCACCCTCCCCCCCCCCCGCTATGTAGCAGCTTGCGGAGGTGCT
GTCCTATCGTTCTTCGCCGGCTCGTCCGAGCATTGCTGACGGGCTGCTTG
GTACCGACGTACCGACGATACCGGTCTGGTGGTGGATGTGAATACGAAAG
CAGCAGCCACCACCACGAGCGGCAAAAAATGACTTGGCTGGTATTGTAGA
TGCTGCCTTCCAGCCCGGGTGATTCGATTTATCCCATGCCTTGAGGACGG
ATGCGACGAGCCCACGTACATACATACCTGGGTCATTCCGTTTAACATAT
TGTGCGTGTTCCAAACCTTTTGACAGCAGGTTGTTGCTCTTGCTACTCTT
GGTGCCTGCCGTGGTTGGTGCCAAAGACATGGTGTGCCCCTGCTCCGCTC
ACCACACAAAGGGGTGCTGACTCCGTCCCTCACGCCCCTCCTTGCTCTTC
TTGACCCCCCACCCGCCCACCCACCCCCGAAAGGATTCACCGTCAAGGAT
CAGCGGTCGGCTTAGCGGGGGCGTTCTCGGGATGAAGAGAGGCGGCGGCG
GGGCAGGGCCTCGACACGGGAAGTCCCCGGGCAGGCCTGTAGACGATAGC
GGCATCAGCGGCGGCACGCCGCCGGGCGACGGCGGGGCCCGGCGGTGGAG
ATAGCCCGTGGAACACGGG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig8114:157..6725+ >mRNA_E_fasciculatus_S2_contig8114.16272.1 ID=mRNA_E_fasciculatus_S2_contig8114.16272.1|Name=mRNA_E_fasciculatus_S2_contig8114.16272.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2718bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8114:157..6725+ (Ectocarpus fasciculatus EfasUO2)
ATGGATAGAGGCAGCGGCGGCATCAGGAGCAGCGACAGGCGAACCGGCGG
CGGCGGCAGCGGCGGCGGCGACTACAACAAGAAGCAGCTGCCCCGGCGGA
GCTCGAACCTGAGGTCGGACTCCTCCGGGGGTATGGTCTCGACCGTTGCT
CCGACGGCGACGCCTTCGACATCCTCGGGTACGGCGACCACCGCCACCGC
GCCGTCCTTCTTCTCGTCGTCCCCTTCGATGACGATATCGGCGGCGTCGG
GGGTACCCACCCCGGACCGGCGGGCGGCGTCTAGCGCGGGTGTCGGCCGC
AGCAGCATCAGGGGCGGCGGGGGCGGCGGCGGCGGTGGCAAGGCCCCGCC
GGCCCGATCGGTGTCGTCGCCGCTCATGGTGCGCGACGAGATGTTCTCCT
CGGCAGAGATCACGGGTCGTCGGAGGGTAGCGGGGACGGGGAGCGGGAGC
GTGGGAGAGAAGGCCCCGGCGGCGGCGGTAGCGGCGACACCGGGGACTCT
CCGCAACCTGCTGTCGTCGTTGCTGCACAAGAGGGTGTCGGAGAGGACCA
CGGTGCGGGAGGCCCAGGACCACCCGTGGATGCGGCGGATGGCCCCGAGG
AAGGGCGGGGACGGCGCCGGGTTGGACGGGCGAGGGGCAGGCACGAGGCG
GGGTCAGCCCCCGCCGTTCCAGCAGGTGTCGGTCACGGCAGGCGAGGTAA
AGGGAGCGATCGTCCACATCAACAGCCTCTTCGTCATCTCGATGGTGAAG
AGCAGGCTCACGCAGCGCCTCACGAGGGCGCGGAAGAACATCGCGCGGCG
ACGGCAGCAGGCCACCACAGGCAACAAGTACGGCCCGAGCCTGTCGGACA
CCGAACAGGAACACCTGAGAGAGGTCCGAGAACTTACCGAGGCCCTCACC
AAGGACGAGGCGGTGCTTATCAACCACGACCTCGCCAACGAGCCAGAGCG
ATCGCTGTCAGACAGCGATTTGCCCACGGCGACGTGCAGCGGCACCTGGG
GAGACCGAAACGGCGAGCGTGCCACCAGGGATGGGGATGGCGGGACCAGA
AGCGACGACGGTGGTGGTGGTGGTGGTGGTCGGCAACGCGACCGTCGCCA
TGGTGACCGTCGCGCTGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCG
GCGGCGGCCGTAGTCGCAGTGGCGGCGGCGGAAGCCGTAGTCGGAGCGGG
GCCGGCGCTGGCGGCAGCGGTGGACGTAGTCGCGGCAGCGGTGCCGGCGG
GCGTCATCACAGCAGTCGCCGCAGCCCCAGCAGCCCAAGCAGCACCAGCA
CCGCGCTGCCCTACCAGCTTTACGCTCGCTCGGCGTCTCGCGTGGCCGGT
CGCGCGGGCGTCCACGACGCGATCACCAACTTCTTCGGCACCCCCGGCGC
GGGCGGCGCCGGCGGTAGCGTCCCCGCGGGCGGCGGCGGCGACCCCAGGG
CCGAGAAAGAACGGTCCTCGAGGACCCGCAGCAGAGGTGGGAGGCGTAGG
CGCTCACGAGAGAAGCCGACGGCGGCGGAGGAGGAGGAGGAGGCTATCCG
CATGGCGACCGCGGCGGCTGCGGCTGCGGCCGCGGCGGGTGGAGCGTCGG
CCTTCGAGGAGGAGGCGCCGCCCAGCGGTGGCGTGGCCGGCCTGACGGGG
CTCACGTCGCTCTCAAAGAGCTTGTCGAACCAGCTGCCGGGGACCTCGGC
GCCGCCGCCGCCGCCGCCGCCGGCCCCGCTGGCGCCTGCGGTGCCGGCCT
CCGGCTTCGGCCCCGCGTGGCCGATATCGGGGCTCCTTTCGATGTCGAGA
AACGCGTCGGGGGACAGCGTCGTTGGCCTTGATGGCAGTGGCGGCCACGG
CGTTAATAGAAGGATGGCGAGTTCCGGTGAGTTGTTTCCGCCGCCGTCGG
AGGCCGCGGGAGGAAGGGAGCAGGAGGAGGAGGAGGGAGTCACGGAAGCA
CCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGCGGAGGGGTC
GAAGTCGCGAGCGAAGATGTACTCGAGGGCCCGGTCGATACGGTCCGTCG
CGAGCACCCGAGGCTTCGACAGCTCGTCGGGATCGGACTCTTGTTCTTTC
AGCAGCGACTTCACTCCCAGCGACGAAGACGACGACGACGACGACGACTA
CGACGACGAGTACTACGACGACGACGACGACCGCTCCTCCGAGGTGTCCG
AGAGGGAGAGTAGGGAGAAGGACGCCCTCAGCATGCTCCGGTACGCGAAT
AGAAGCATGGCCAACTTCGGCAGCGAGGGCAGCAGTCCGGCCGGAAACAA
CCAGCGGCGGACCCGGGGTAGCTTCCGGGTGTTCGGCATCAAGCGTCGCA
CCCTCAAGATCAAGCAACAAATACCCAAGATGTCGCGCATGAGCATTTCC
CGCAGCGGCAGCAACAGCAGACGAGAGCGAGAGGGAGGGGGAAGCGGGGC
GGCAGCAGCAGGTCGCCATCCGGACCCGGTGGTCGACGATGGCGTCGGCA
TCAGAGGGATGGTCATGGCGGTGCCCATGGAGCGCAAGCTGATGTCGGAT
TCACCGTCAAGGATCAGCGGTCGGCTTAGCGGGGGCGTTCTCGGGATGAA
GAGAGGCGGCGGCGGGGCAGGGCCTCGACACGGGAAGTCCCCGGGCAGGC
CTGTAGACGATAGCGGCATCAGCGGCGGCACGCCGCCGGGCGACGGCGGG
GCCCGGCGGTGGAGATAG back to top
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