mRNA_E_fasciculatus_S2_contig8110.16269.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8110.16269.1
Unique NamemRNA_E_fasciculatus_S2_contig8110.16269.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8110.16269.1 vs.
Match: SMC (hinge domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG1_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 4.100e-77
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 3 
Query:  192 TFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAARPKQG 587
            TFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAARPKQG
Sbjct:  766 TFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAARPKQG 897
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BLAST of mRNA_E_fasciculatus_S2_contig8110.16269.1 vs.
Match: Structural (maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU4_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 8.010e-73
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 3 
Query:  192 TFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAA 572
            TFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAA
Sbjct: 1190 TFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAA 1316
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8110.16269.1 vs.
Match: Hypothetical (protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4Y7_CYCTE)

HSP 1 Score: 191 bits (486), Expect = 8.250e-58
Identity = 90/116 (77.59%), Postives = 111/116 (95.69%), Query Frame = 3 
Query:  195 FLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVG 542
            F+MSQLSGGQKA+VALALIF+IQRCDPAPFYLFDE+DQALDS+YRAAVASL+Q QA+S++NPTQFI +TFRPE+V+VA++CYGISHQNKVS++H L +++AL F+AN+MNEEEAVG
Sbjct:  119 FMMSQLSGGQKALVALALIFSIQRCDPAPFYLFDELDQALDSTYRAAVASLVQHQANSAENPTQFIVSTFRPELVSVANRCYGISHQNKVSSVHHLSKKDALHFIANLMNEEEAVG 234
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BLAST of mRNA_E_fasciculatus_S2_contig8110.16269.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7J6_TRICV)

HSP 1 Score: 191 bits (486), Expect = 4.400e-56
Identity = 91/116 (78.45%), Postives = 110/116 (94.83%), Query Frame = 3 
Query:  195 FLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVG 542
            +LMSQLSGGQKA+VA+ALIFAIQRCDPAPFYLFDE+DQALDSS+RAAVA+LIQRQA S +NPTQF+ +TFRPE+VAV+++CYGISHQNKVSN+H L +++AL F+AN+MNEEEAVG
Sbjct:  257 YLMSQLSGGQKALVAMALIFAIQRCDPAPFYLFDELDQALDSSHRAAVAALIQRQASSDENPTQFVCSTFRPELVAVSNRCYGISHQNKVSNLHHLSKKDALHFIANLMNEEEAVG 372
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BLAST of mRNA_E_fasciculatus_S2_contig8110.16269.1 vs.
Match: Structural (maintenance of chromosomes protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7T2_9STRA)

HSP 1 Score: 201 bits (510), Expect = 5.400e-56
Identity = 100/132 (75.76%), Postives = 119/132 (90.15%), Query Frame = 3 
Query:  195 FLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVG-VELQQPASAARPKQG 587
            +LMSQLSGGQKA+VALALIFAIQRCDPAPFYLFDE+DQALDS+YRAAVA+LIQRQA+S +NPTQF+ +TFRPE+VAVA++CYGISHQNKVSNIHVL +++AL F+AN+MNEEEAVG V       A+RP+ G
Sbjct: 1147 YLMSQLSGGQKALVALALIFAIQRCDPAPFYLFDELDQALDSTYRAAVAALIQRQANSDENPTQFVCSTFRPELVAVANRCYGISHQNKVSNIHVLSKKDALHFIANLMNEEEAVGEVTSLATTKASRPESG 1278
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BLAST of mRNA_E_fasciculatus_S2_contig8110.16269.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RIM5_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.530e-53
Identity = 89/116 (76.72%), Postives = 108/116 (93.10%), Query Frame = 3 
Query:  195 FLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVG 542
            ++MSQLSGGQKA+VALALIF+IQRCDPAPFYLFDE+DQALDS+YRAAVA +IQRQA+S DNPTQFI +TFRPE+V +A+ CYGISHQNKVS++H L +++AL F+AN+MNEEEAVG
Sbjct:  522 YMMSQLSGGQKALVALALIFSIQRCDPAPFYLFDELDQALDSTYRAAVAGVIQRQANSEDNPTQFICSTFRPEIVTIANHCYGISHQNKVSSVHYLSKKDALHFIANLMNEEEAVG 637
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BLAST of mRNA_E_fasciculatus_S2_contig8110.16269.1 vs.
Match: Structural (maintenance of chromosomes protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I268_9STRA)

HSP 1 Score: 192 bits (488), Expect = 4.900e-53
Identity = 98/139 (70.50%), Postives = 119/139 (85.61%), Query Frame = 3 
Query:  195 FLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAARPKQGGGSRRGSR 611
            +LMSQLSGGQKA+VALALIFAIQRCDPAPFYLFDE+DQALDS+YRAAVA+LI+RQA+S +NPTQFI +TFRPE+V+VA++CYGISHQNKVSNIH L +++ L F+AN+M+EEEAVG   +  + A   K G    RGSR
Sbjct: 1154 YLMSQLSGGQKALVALALIFAIQRCDPAPFYLFDELDQALDSTYRAAVAALIERQANSEENPTQFICSTFRPELVSVANRCYGISHQNKVSNIHHLSKRDGLHFIANLMSEEEAVG---EVTSLATSKKSGSAKSRGSR 1289
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BLAST of mRNA_E_fasciculatus_S2_contig8110.16269.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TI32_HETAK)

HSP 1 Score: 179 bits (455), Expect = 2.490e-52
Identity = 88/115 (76.52%), Postives = 103/115 (89.57%), Query Frame = 3 
Query:  195 FLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAV 539
            FLMSQLSGGQKA+VALA+IFAIQRCDPAPFYLFDE+DQALDSSYRA VA+LIQ+QA   DNP QFIT+TFRPE+V+VA + YGISHQNKVSNI+ L +++AL FV ++MNEEE V
Sbjct:  178 FLMSQLSGGQKALVALAIIFAIQRCDPAPFYLFDELDQALDSSYRAQVAALIQQQARDEDNPAQFITSTFRPELVSVADKTYGISHQNKVSNINPLGKEDALDFVRDLMNEEERV 292
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BLAST of mRNA_E_fasciculatus_S2_contig8110.16269.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GJA6_9STRA)

HSP 1 Score: 186 bits (472), Expect = 4.810e-52
Identity = 91/129 (70.54%), Postives = 112/129 (86.82%), Query Frame = 3 
Query:  195 FLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAARPK 581
            ++MSQLSGGQKA+VA+ LIFAIQRCDPAPFYLFDE+DQALDSS+RA+VA+LIQRQA S +NPTQFI +TFRPE+V VA++CYGISHQNKVS+IH L +++A+ F+AN+MNEEEAVG   +   S A  K
Sbjct:  501 YMMSQLSGGQKALVAMGLIFAIQRCDPAPFYLFDELDQALDSSHRASVANLIQRQASSEENPTQFIVSTFRPELVKVANRCYGISHQNKVSSIHHLGKKDAMHFIANLMNEEEAVGDVTKLRTSVASTK 629
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8110.16269.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANS6_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.710e-51
Identity = 91/122 (74.59%), Postives = 105/122 (86.07%), Query Frame = 3 
Query:  195 FLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQP 560
            FLMSQLSGGQKA+VAL+++FAIQRCDPAPFYLFDE+DQALDS+YRAAVA++IQRQA    NPTQFITTTFRPE+V VA++CYGIS QNK SNIH L + EAL FVA++MNEEE VG     P
Sbjct:  459 FLMSQLSGGQKAIVALSIVFAIQRCDPAPFYLFDELDQALDSTYRAAVAAMIQRQASHPTNPTQFITTTFRPELVNVAAKCYGISLQNKNSNIHPLSKGEALSFVADLMNEEEGVGTVSATP 580
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8110.16269.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
SMC4.100e-77100.00hinge domain-containing protein n=1 Tax=Ectocarpus... [more]
Structural8.010e-73100.00maintenance of chromosomes protein n=1 Tax=Ectocar... [more]
Hypothetical8.250e-5877.59protein n=2 Tax=Cyclophora tenuis TaxID=216820 Rep... [more]
Hypothetical4.400e-5678.45protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Structural5.400e-5675.76maintenance of chromosomes protein n=1 Tax=Ditylum... [more]
Hypothetical2.530e-5376.72protein n=1 Tax=Eucampia antarctica TaxID=49252 Re... [more]
Structural4.900e-5370.50maintenance of chromosomes protein n=1 Tax=Odontel... [more]
Hypothetical2.490e-5276.52protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical4.810e-5270.54protein n=1 Tax=Proboscia inermis TaxID=420281 Rep... [more]
Hypothetical1.710e-5174.59protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8110contigE_fasciculatus_S2_contig8110:143..2777 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score250.0
Seed ortholog evalue9.5e-64
Seed eggNOG ortholog2880.D8LEU4
Preferred nameSMC3
Model size613
KEGG koko:K06669
KEGG Pathwayko04110,ko04111,ko04113,ko04114,map04110,map04111,map04113,map04114
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000724,GO:0000725,GO:0000775,GO:0000779,GO:0000780,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000795,GO:0000798,GO:0000800,GO:0000819,GO:0000922,GO:0001736,GO:0001737,GO:0001738,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003774,GO:0003777,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005604,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0005911,GO:0006139,GO:0006259,GO:0006275,GO:0006281,GO:0006302,GO:0006310,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0007088,GO:0007127,GO:0007129,GO:0007130,GO:0007131,GO:0007135,GO:0007164,GO:0007275,GO:0007346,GO:0007399,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008092,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008278,GO:0008544,GO:0009506,GO:0009507,GO:0009536,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009913,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010948,GO:0015630,GO:0015631,GO:0016043,GO:0016301,GO:0016310,GO:0016363,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019827,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022008,GO:0022402,GO:0022413,GO:0022414,GO:0022607,GO:0030030,GO:0030054,GO:0030154,GO:0030182,GO:0030435,GO:0030437,GO:0030855,GO:0030892,GO:0030893,GO:0031012,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032505,GO:0032875,GO:0032876,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0034085,GO:0034086,GO:0034087,GO:0034088,GO:0034293,GO:0034399,GO:0034502,GO:0034613,GO:0034641,GO:0034990,GO:0034991,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0035315,GO:0035316,GO:0035317,GO:0035821,GO:0035825,GO:0036033,GO:0036211,GO:0040012,GO:0040017,GO:0042623,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043388,GO:0043412,GO:0043900,GO:0043902,GO:0043903,GO:0043934,GO:0043935,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0044788,GO:0044789,GO:0044791,GO:0044794,GO:0044877,GO:0045132,GO:0045143,GO:0045144,GO:0045786,GO:0045934,GO:0046483,GO:0046982,GO:0046983,GO:0048285,GO:0048468,GO:0048487,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048524,GO:0048563,GO:0048569,GO:0048646,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051171,GO:0051172,GO:0051177,GO:0051179,GO:0051276,GO:0051321,GO:0051493,GO:0051641,GO:0051702,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051817,GO:0051851,GO:0055044,GO:0060147,GO:0060236,GO:0060255,GO:0060429,GO:0060562,GO:0060966,GO:0060968,GO:0061775,GO:0061780,GO:0061982,GO:0061983,GO:0062022,GO:0062023,GO:0065007,GO:0065009,GO:0070013,GO:0070192,GO:0070193,GO:0070507,GO:0070601,GO:0070727,GO:0070840,GO:0071168,GO:0071704,GO:0071840,GO:0071921,GO:0071960,GO:0071962,GO:0072686,GO:0080090,GO:0090169,GO:0090224,GO:0090304,GO:0090329,GO:0097159,GO:0097431,GO:0098687,GO:0098727,GO:0098813,GO:0099086,GO:0120036,GO:0140013,GO:0140014,GO:0140096,GO:1900368,GO:1901360,GO:1901363,GO:1901564,GO:1901673,GO:1902115,GO:1902186,GO:1902188,GO:1903046,GO:1903047,GO:1903900,GO:1903902,GO:1990414,GO:2000104,GO:2000112,GO:2000113
Exons5
EggNOG free text desc.maintenance of mitotic sister chromatid cohesion, centromeric
EggNOG OGsCOG1196@1,KOG0964@2759
Cds size606
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00535,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8110.16269.1prot_E_fasciculatus_S2_contig8110.16269.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8110 148..2777 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842472.5342612-UTR-E_fasciculatus_S2_contig8110:142..1471696842472.5342612-UTR-E_fasciculatus_S2_contig8110:142..147Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8110 143..147 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842472.5480154-CDS-E_fasciculatus_S2_contig8110:147..1791696842472.5480154-CDS-E_fasciculatus_S2_contig8110:147..179Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8110 148..179 +
1696842472.5568857-CDS-E_fasciculatus_S2_contig8110:671..8251696842472.5568857-CDS-E_fasciculatus_S2_contig8110:671..825Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8110 672..825 +
1696842472.568465-CDS-E_fasciculatus_S2_contig8110:1466..15831696842472.568465-CDS-E_fasciculatus_S2_contig8110:1466..1583Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8110 1467..1583 +
1696842472.5774207-CDS-E_fasciculatus_S2_contig8110:1876..20291696842472.5774207-CDS-E_fasciculatus_S2_contig8110:1876..2029Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8110 1877..2029 +
1696842472.586297-CDS-E_fasciculatus_S2_contig8110:2627..27771696842472.586297-CDS-E_fasciculatus_S2_contig8110:2627..2777Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8110 2628..2777 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8110.16269.1

>prot_E_fasciculatus_S2_contig8110.16269.1 ID=prot_E_fasciculatus_S2_contig8110.16269.1|Name=mRNA_E_fasciculatus_S2_contig8110.16269.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=202bp
MTGRVTTKQGTPAPARSLRKGKERPRPRHGKEKTGRGRMKKNRTACRQRR
WSATSSVCRSRSTFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEID
QALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQ
NKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAARPKQGGGSRRG
SR
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mRNA from alignment at E_fasciculatus_S2_contig8110:143..2777+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8110.16269.1 ID=mRNA_E_fasciculatus_S2_contig8110.16269.1|Name=mRNA_E_fasciculatus_S2_contig8110.16269.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2635bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8110:143..2777+ (Ectocarpus fasciculatus EfasUO2)
GGAAGATGACGGGGAGGGTGACGACGAAGCAGGGAACGTGAGGATTTAGC
TTGAGTTGTTTCTGGGATATGGAAGGGGTACGTGATTTGAACGGGGTAGG
TGTGTCGTAGCTGACGGGGGGGTCATCTGCAGCTGGCCCTGTCTGTTGTG
GGGCGACACACAAGATCTAGCCACCACGGAACCCCCCGTCCCAGACCTCC
CAAAAGAGAACGAAAAGCGATGAAAGCCGGCGATAAAATGTCTGAAATTT
CGAGTATCGTGGCCAGTTGTGGGTATCGTAGGCAAGCTCGTCGGCAGCCA
ACAGCCCGGACCAAAACGTCGAACAGCCCAAGGTAAAAAAGGAAGTACGG
GACTTTTCCTTCTGTCCCAGCTTCGAATGTTAGTTTTTGCGATAACCATG
GTCGCTTTCCTCGCTTGCACGAAAATCCTAAAAACTTATCTTCGTAGAAT
ATCCCTTTCTTCCTTCCTCCCCCCTCTGCCGTCTCATGTTCGTGCAACAC
CGCAAAACCGTCGGGCACACCAAACATAGCCCGGCTCCGGCAAGAAGTCT
ACGAAAGGGAAAGGAAAGGCCAAGGCCAAGGCACGGGAAGGAGAAGACGG
GGCGGGGGCGGATGAAGAAGAACCGAACGGCTTGTCGCCAACGACGCTGG
TCAGCGACTTCGTCGGTGTGCAGATCAAGGTCAGCCATCAGCCATCGATC
GTCGCGCTGTTTCAGTGTCAATGGTCTTACAATAGGTGTTGAGCGTTTCG
CTACTTTCTCTGTCGTTAAGGCGTGGTATGTGTATGCATAACACAAAAGA
TACTTTTTGTGCGGGTTTGGGATCCTTGCGGTCGTGCGGTCGACTTTTTT
TTTCGTCAGGTATGTTGTGCGTTTCGTTTCTATGTTTGCGTTGTGCACGT
TTGATGGGTGGTTAACGTTTCGATCGGCAAGGAATTTGAATAGTGTTGCC
ATGTTTTCTGCGACGATGAAGATGGTCTGCTACATACCGGTTGGATCGGG
GAGGAGTCAGGGGACACAGGAAGGAAGCAGGGGGTAAAGTAATCTTTGGT
AGAACTTCTCGGTCGACGTGAAAAGAGCCCCACGGCGCCGGTGTGTGTGT
TTTTGTCGTTGTTCATTTCTTGCTGTTGGTGTCTTGCTCTTCTTCGCAAC
GCTATGTCCAAACAATCTCCAGATCGTTGGTGTTTTTCTTTTTTCGCATC
GCCGATGGTCGTCCCTTCTCGCTCGTTATGTCGATGATCGATCGCCCATC
CCGTTTGCTTCTTCGATCGTGCGGTGGCGTTGTCGTGGTCTTGGTTATAG
GTGTCGTTTGTGGCCGCGGGGGAGACGTTCCTCATGTCGCAGCTCTCGGG
GGGACAGAAGGCCGTGGTTGCGCTCGCCCTCATCTTCGCGATTCAGCGCT
GCGACCCCGCCCCCTTCTACCTTTTCGACGAGATTGACCAGGTGAGAAGG
GTGCGGACACATTCTGGCACACGGCTAGGGAGAGCTCGGGTCGACATTCG
AAAGGAAGGTGCTTCTGTCGTGTTGTTGTCCGTTGCCATCTGTGTTTTAT
GGTTCGTATTTCAAACGAGCCAGACTTTGGGCAGCCCCAGCGACTCGGTT
GTGGTGTGCCTCATGATGATCGTCTTCGGAACACTCAGTTTGGTGTTCGT
TCGGCAAGAATACCGCGTGGATCCAAAGGTGTGCATGCTTCAAAAACTGA
GTTTTTTTTTTTCGGTTTTTCATGGCCAAACCAGGCACTGGATAGCTCCT
ACCGCGCGGCCGTGGCCTCCCTGATCCAGAGGCAAGCCCACTCTTCGGAC
AACCCGACGCAGTTCATCACCACCACGTTCCGCCCGGAGATGGTGGCTGT
CGCCAGCCAGTGCTACGGAATCTCCCACCAGAACAAGGTACGCGTACGTT
TGGGGCTCCGCGTGTCAGGCGAAATAATGGCCTTTAGGCGGATGGCTGCA
ACGTAGTTGCTGTTGTTTGGTTGGCGCCTCCGCGATTCCTCGGAAACATT
TTCATCTTGAAATACGATGCAAATGGGTTGTCACGAAAGTATTTTTGCTT
CTTTTTTTTTGCCTCGCCGCCCGCTACCGGGTCTCCCACCAGAACTTTAG
GGATGTTGGCATCTTGTCGGGAGTTGGGACAGTTTCGGGTATTCACCTAT
CAAACAAATCCGATCTCGAGCGTAATACAATGCGACCGATCGTTAGTGGG
GATGTACACTGGTATACCTACCCTTCCTGCGGTTTCCATGGGAAATACAT
CAACCCGCCTCCCCCACATGCCTCAAGACAGCTCCGCTGCCCCTGGGTTG
TCTAGCAAGGTTGTCAACGAAGTCATCAAGAACCTCCGCGGTGTTGCATC
ATATGTGGATGATTTGATCGTCTTTGACCTTACTCCTGATTCTCTCATGT
TGGAACCAGTTCGCACTCTGTTTGAACGATTGCGTACACACAACTTGACT
GACGACCCCACCCCCTCCCCACCCGCCCACCCAAGGTGAGCAACATCCAC
GTCCTGCCGCGCCAGGAGGCTCTGGGTTTCGTGGCCAACATCATGAACGA
GGAAGAGGCCGTCGGGGTGGAGCTGCAGCAGCCCGCGAGCGCCGCGCGCC
CAAAGCAGGGAGGAGGGTCACGCCGGGGCAGCAGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8110:143..2777+

>mRNA_E_fasciculatus_S2_contig8110.16269.1 ID=mRNA_E_fasciculatus_S2_contig8110.16269.1|Name=mRNA_E_fasciculatus_S2_contig8110.16269.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=606bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8110:143..2777+ (Ectocarpus fasciculatus EfasUO2)
ATGACGGGGAGGGTGACGACGAAGCAGGGAACCCCGGCTCCGGCAAGAAG
TCTACGAAAGGGAAAGGAAAGGCCAAGGCCAAGGCACGGGAAGGAGAAGA
CGGGGCGGGGGCGGATGAAGAAGAACCGAACGGCTTGTCGCCAACGACGC
TGGTCAGCGACTTCGTCGGTGTGCAGATCAAGGTCAACGTTCCTCATGTC
GCAGCTCTCGGGGGGACAGAAGGCCGTGGTTGCGCTCGCCCTCATCTTCG
CGATTCAGCGCTGCGACCCCGCCCCCTTCTACCTTTTCGACGAGATTGAC
CAGGCACTGGATAGCTCCTACCGCGCGGCCGTGGCCTCCCTGATCCAGAG
GCAAGCCCACTCTTCGGACAACCCGACGCAGTTCATCACCACCACGTTCC
GCCCGGAGATGGTGGCTGTCGCCAGCCAGTGCTACGGAATCTCCCACCAG
AACAAGGTGAGCAACATCCACGTCCTGCCGCGCCAGGAGGCTCTGGGTTT
CGTGGCCAACATCATGAACGAGGAAGAGGCCGTCGGGGTGGAGCTGCAGC
AGCCCGCGAGCGCCGCGCGCCCAAAGCAGGGAGGAGGGTCACGCCGGGGC
AGCAGA
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