mRNA_E_fasciculatus_S2_contig81.16259.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig81.16259.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBC0_ECTSI) HSP 1 Score: 707 bits (1825), Expect = 3.170e-251 Identity = 362/397 (91.18%), Postives = 373/397 (93.95%), Query Frame = 2
Query: 68 MALEARRLWTVTGLALVVGTQGFVHHPTCAAARGAAGMRRHSASRSSPSPATQRALSLQLTRRRPRAVDSAGSSSWGCYDRNAGRGASAGGFLFSAQQSVDGGVMLPPAETADEYAAFLSESIREHLDDEWIEQECHKGIGEEVARLYLAAFEKGDTDMTTLVLDIGSAMEQYDMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKAPKTLPSAGSDAFRLTSNKVEQMQADLTSDFARYRFLLDLMEGNTDWEQANTIMAVYQGYAAEGEEEE-GGRPEVRRGWSAVFPGATPPDLSSAEGWVEALQADFPDDPDLLDGLEVIVETVYGGEAKRLHQGDPDNGIPPEPLYLRRSTLCKWLYLVGFLSDDIKRAPDDPEQLAELISGRARLKHQKK 1255
MAL+ARRLWTVTGLALVVGT+GFVHHP AARGA M R+SASRSSPSPA QRAL LQ+ RRRPRAVD A SSSWGCYDRNAGRGASA G LF+ QQSVDGGVMLPPAE ADEYAAFLSESIREHL+DEWIEQ+CHKGIGEEVARLYLAAFEKGDTDMTTLVLD+GSAMEQ+DMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKAPKTLPSAGSDAF LTS+K EQMQADLTSDFARYRFLLDLMEGNTDWEQANTIMAVYQGY EGEEEE GRP VRRGWSA FPGATPPDLSSAEG VEALQADFPDDPDLLDGLEVIVETVYGGEAKRLHQGDPDNG+PPEPLYLRRSTLCKWLYLVGFLSDDIKRAPDDPEQLAELISGRARLKHQKK
Sbjct: 1 MALDARRLWTVTGLALVVGTKGFVHHPPPCAARGATEMGRNSASRSSPSPAAQRALPLQVARRRPRAVDDAASSSWGCYDRNAGRGASAVGSLFAVQQSVDGGVMLPPAEKADEYAAFLSESIREHLNDEWIEQDCHKGIGEEVARLYLAAFEKGDTDMTTLVLDMGSAMEQFDMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKAPKTLPSAGSDAFCLTSDKAEQMQADLTSDFARYRFLLDLMEGNTDWEQANTIMAVYQGYPVEGEEEEESGRPGVRRGWSASFPGATPPDLSSAEGLVEALQADFPDDPDLLDGLEVIVETVYGGEAKRLHQGDPDNGVPPEPLYLRRSTLCKWLYLVGFLSDDIKRAPDDPEQLAELISGRARLKHQKK 397
BLAST of mRNA_E_fasciculatus_S2_contig81.16259.1 vs.
Match: 1,3-beta-glucan (synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S2_9STRA) HSP 1 Score: 148 bits (374), Expect = 3.410e-33 Identity = 67/148 (45.27%), Postives = 100/148 (67.57%), Query Frame = 2
Query: 350 SAQQSVDGGVMLPPAETADEYAAFLSESIREHLDDEWIEQECHKGIGEEVARLYLAAFEKGDTDMTTLVLDIGSAMEQYDMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKAPKTLPSAGSDAFRLTSNKVEQMQADLTSDFARYR 793
+++ GGV LPP + A ++ FL E+I+ HLD EW+ Q CH IG+EV R+YL++ E+G TD+ L++D+G+ +E +DMGDAFVG WD+ANLVSDF++ +MG E + CS K P+ + + G F T+ V +Q +L +F R R
Sbjct: 6 TSEGGYGGGVQLPPKQDAAVFSQFLKEAIQAHLDQEWLPQPCHTDIGQEVGRIYLSSVERGTTDLNQLIMDVGTTLESFDMGDAFVGGWDVANLVSDFMLARMGLERACCSTKLPEGISATGDTVF-ATAESVSSLQRELHGEFERPR 152
BLAST of mRNA_E_fasciculatus_S2_contig81.16259.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ53_9STRA) HSP 1 Score: 132 bits (333), Expect = 2.340e-30 Identity = 94/294 (31.97%), Postives = 149/294 (50.68%), Query Frame = 2
Query: 413 AAFLSESIREHLDDEWIEQECHKGIGEEVARLYLAAFEKGDTDMTTLVLDIGSAMEQYDMGDAFVGAWDIANLVSDFLMEKMGA-ETSGCSAKAPKTLPSAGS---------DAFRLTSNK-------VEQMQADLTSDFARYRFLLDLMEGNTD----WEQANTIMAVYQGYAAEGEEEEGG---RPEVRRGWSAVFPGATPPDL---SSAEGWVEALQADFPDDPDLLDGLEVIVETVYGGEAKRL--HQGDPDNGIPPEPLYLRRSTLCKWL----YLVGFLSDDIKRAPD 1195
A +L ++++ HLD+EWI QECH +G +Y+ E+G T + +V+ +G A+E+ DMGDA+VGAWD+ANL SDFLM+++ E GCSA + P DA T+ K VE+ +++++ RY F + +E + D W +TI+A+ Y GG +V W +P PP++ ++E L+ D+P++PD LD L+ ++ +YG EA +L GD + + +R T+ KWL +L F D K D
Sbjct: 61 AEWLGKAVQTHLDEEWIAQECHAELGNVCKDVYMQLHEEGKTQIMDVVVAVGEALEKVDMGDAYVGAWDVANLCSDFLMQRLDDHEPIGCSAVSSVPFPGEEEGISSSEEEDDAVEPTALKWMFTKEAVEETTEAMSTNWRRYLFQQNFLEPSEDEAMTWPHMSTIVAMLLNYKPP--TTPGGPVGTEDVEERWREGYP--EPPNVFLEKDNTAFLEMLELDYPENPDDLDFLDEFIDQLYGMEAHKLACKSGDVE--------FSQRRTIVKWLQDRNFLASFPPDPAKNGRD 342
BLAST of mRNA_E_fasciculatus_S2_contig81.16259.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YXN0_9CRYP) HSP 1 Score: 95.1 bits (235), Expect = 1.320e-17 Identity = 92/308 (29.87%), Postives = 145/308 (47.08%), Query Frame = 2
Query: 323 GASAGGF--LFSAQQSVD----GGVMLPPAETADEYAAFLSESIREHLDDEWIEQECHKGIGEEVARLYLAAFEKGDTDMTTLVLDIGSAMEQYDMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKAPKTLPSA---GSDAFRLTSNKVEQMQADLTSDFARYRFLLDLMEGNTDWEQANTIMAVYQGYAAEGEEEEGGRPEVRRGW-SAVFP--GATPPDLSSAEGWV--------------EALQADFPDDPDLLDGLEVIVETVYGGEAKRL--HQGDPDNGIPPEPLYLRRSTLCKWLYLVG 1162
GASAGG L + + D GGV LP + E +A+LS +R+ LDDEWI ++ H+ IGE A Y +A E+G + +++++ + M + ++ +A VGA+DIAN V+D L+ G + C+++ P A SD F + + + D S F RY+FL L++G T + + GY EVR+G SAV+ G T +G++ E+L+ D+ DL+ +VE + G A R+ +GD D + R KWL+ G
Sbjct: 44 GASAGGVPGLRAQADAADAGDRGGVQLPSGDVK-EVSAWLSAEVRQWLDDEWIPRDIHREIGEIAAGAYESARERGVNEAGDILMEVANTMMEVNLYEADVGAFDIANKVTDLLLINDGRDVC-CTSQPYNAAPGAIAQASDGFVVPAEAEAWARPD--SSFDRYQFLQQLIDGRTHPAVIDRAVLESLGY------------EVRKGADSAVYDSSGVTDDRALGIKGFMGNEDSCEILQDMLEESLEEQNKDEEDLVP----LVEALVGEAALRMAKEEGDVD--------FAMREVCVKWLHFAG 323
BLAST of mRNA_E_fasciculatus_S2_contig81.16259.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY21_9EUKA) HSP 1 Score: 87.8 bits (216), Expect = 4.720e-16 Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 2
Query: 413 AAFLSESIREHLDDEWIEQECHKGIGEEVARLYLAAFEKGDTDMTTLVLDIGSAM---EQYDMGDAFVGAWDIANLVSDFLMEKM-GAETSGCSAKAPKTLPS 709
A+FL SI+ LD EWI+Q+ H IG EV RLY +G D+T +VL+IG + +Q+DMGDAFVG WD+AN+V D L+ ++ G + + C+ +PS
Sbjct: 105 ASFLEASIQTTLDKEWIKQDIHGVIGSEVGRLYTKYRSEGINDVTLMVLEIGGFLSDPKQFDMGDAFVGGWDVANMVGDLLIARIAGPDGADCACSDVVVIPS 207
BLAST of mRNA_E_fasciculatus_S2_contig81.16259.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2FXN0_HEMAN) HSP 1 Score: 87.4 bits (215), Expect = 6.090e-15 Identity = 80/281 (28.47%), Postives = 129/281 (45.91%), Query Frame = 2
Query: 353 AQQSVDGGVMLPPAETADEYAAFLSESIREHLDDEWIEQECHKGIGEEVARLYLAAFEKGDTDMTTLVLDIGSAMEQYDMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKAPKTLPSA---GSDAFRLTSNKVEQMQADLTSDFARYRFLLDLMEGNTDWEQANTIMAVYQGYAAEGEEEE------GGRPEVRRGWSAVFPGATPPDLSSAEGWVEALQADFPDDPDLLDGLEVIVETVYGGEAKRL--HQGDPDNGIPPEPLYLRRSTLCKWLYLVG 1162
A S GV LP E +A+LS+ +R+ LDDEWI ++ H+ IGE A Y +A E+G + +++++ + M D+ +A VGA+DIAN V+D L+ G + C+ + PS+ SD + V D S F RY+FL M+G TD + + G+ E+++ + + G + + D S E E L+ D + + LE ++E + G A R+ +GD D + R KWL+ G
Sbjct: 74 ASTSDKDGVQLPEGNVK-EVSAWLSDEVRQWLDDEWIPRDIHREIGEIAAGAYESARERGINEAGDILMEVANTMMGVDLYEADVGAFDIANKVTDLLLINDGRDVC-CTVQPYNAGPSSRAVASDDSVVPPEAVSWTVPD--SGFDRYQFLQQTMDGRTDASVVDRAVLESLGFTVRKEQDKTVYDASSVKDDRVLGINKILG-----DEESCELLQEMLKEDLEEANKDEEDLEPLIEALVGEGAFRMAKDEGDVD--------FAMREVCVKWLHFSG 337
BLAST of mRNA_E_fasciculatus_S2_contig81.16259.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DMC2_9EUKA) HSP 1 Score: 84.0 bits (206), Expect = 1.030e-14 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 2
Query: 413 AAFLSESIREHLDDEWIEQECHKGIGEEVARLYLAAFEKGDTDMTTLVLDIGSAMEQ---YDMGDAFVGAWDIANLVSDFLMEKM-GAETSGCSAKAPKTLP 706
AAFL SI+ LD EWI+Q+ H IG EV RLY G D+T +VL+IG + +DMGDAFVG WD+AN+V D L+ ++ G + + C+ +P
Sbjct: 106 AAFLEASIQTSLDKEWIKQDIHGVIGSEVGRLYTKFRGDGVDDVTLMVLEIGGFLSDPKLFDMGDAFVGGWDVANMVGDLLIARIAGPDGADCACSDVVAIP 207
BLAST of mRNA_E_fasciculatus_S2_contig81.16259.1 vs.
Match: Hypothetical (protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GRL0_9EUKA) HSP 1 Score: 81.3 bits (199), Expect = 7.040e-14 Identity = 40/85 (47.06%), Postives = 59/85 (69.41%), Query Frame = 2
Query: 413 AAFLSESIREHLDDEWIEQECHKGIGEEVARLYLAAFEKGDTDMTTLVLDIGSAM---EQYDMGDAFVGAWDIANLVSDFLMEKM 658
A FLS S+++ LD EWI Q+ H IG EV RLY+ E+G D++ +VL+IG + +++DMGDAFV WD+AN+V D L+ ++
Sbjct: 97 AKFLSVSVQQSLDKEWIVQDVHGIIGVEVERLYVKFREEGINDVSMMVLEIGGYLADRKKFDMGDAFVSGWDVANMVGDLLLVRI 181
BLAST of mRNA_E_fasciculatus_S2_contig81.16259.1 vs.
Match: Hypothetical (protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PXV0_9EUKA) HSP 1 Score: 78.6 bits (192), Expect = 2.830e-13 Identity = 44/101 (43.56%), Postives = 57/101 (56.44%), Query Frame = 2
Query: 344 LFSAQQSVDGGVMLPPAETADEYAAFLSESIREHLDDEWIEQECHKGIGEEVARLYLAAFEKGDTDMTTLVLDIGSAMEQYDMGDAFVGAWDIANLVSDFL 646
L +++ + + PPAETA AA L E I LD+EW EQE H + A Y G ++ L++ IG A+EQ DMGD FVG WDIAN+ SD L
Sbjct: 64 LLASKSDLTPRDLTPPAETAGT-AARLIEQISTRLDEEWEEQEDHLLVARAAATAYEECRATGRDEIAQLMVAIGGALEQMDMGDCFVGPWDIANMASDIL 163
BLAST of mRNA_E_fasciculatus_S2_contig81.16259.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I2U7_9ALVE) HSP 1 Score: 78.2 bits (191), Expect = 7.970e-13 Identity = 39/115 (33.91%), Postives = 67/115 (58.26%), Query Frame = 2
Query: 368 DGGVMLPPAETADEYAAFLSESIREHLDDEWIEQECHKGIGEEVARLYLAAFEKGDTDMTTLVLDIGSAMEQYDMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKAPKTLPSA 712
+ GV L P + +E A++L +++++ LD+EWIEQ H +G V Y+ +G +D+ T++ IG D+G+ FV W IAN VS+ L+ ++ E + +A A + P+A
Sbjct: 85 ESGVSLEPLQNWEEVASYLGDTVKDWLDEEWIEQYDHVRVGNFVKEYYVRFRSEGVSDLMTMLFCIGEEFMNEDLGECFVDGWTIANKVSELLISRLEEEQAQDAAAASSSSPAA 199 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig81.16259.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig81.16259.1 >prot_E_fasciculatus_S2_contig81.16259.1 ID=prot_E_fasciculatus_S2_contig81.16259.1|Name=mRNA_E_fasciculatus_S2_contig81.16259.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=397bp MALEARRLWTVTGLALVVGTQGFVHHPTCAAARGAAGMRRHSASRSSPSPback to top mRNA from alignment at E_fasciculatus_S2_contig81:44405..49609+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig81.16259.1 ID=mRNA_E_fasciculatus_S2_contig81.16259.1|Name=mRNA_E_fasciculatus_S2_contig81.16259.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5205bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig81:44405..49609+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig81:44405..49609+ >mRNA_E_fasciculatus_S2_contig81.16259.1 ID=mRNA_E_fasciculatus_S2_contig81.16259.1|Name=mRNA_E_fasciculatus_S2_contig81.16259.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1191bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig81:44405..49609+ (Ectocarpus fasciculatus EfasUO2)back to top |