prot_E_fasciculatus_S2_contig8083.16240.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8083.16240.1
Unique Name	prot_E_fasciculatus_S2_contig8083.16240.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	84

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8083.16240.1 vs. uniprot
Match: A0A6H5KH56_9PHAE (PHD domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH56_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 7.490e-52
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0

Query:    1 ELEEEEVALAAKMLPRWKQRHDVDCRRCGEGGIVLCCDFCHLVYHPRCLEVTPGLTSLFACSDCKEEAAILEWELKGRDDAASG 84
            ELEEEEVALAAKMLPRWKQRHDVDCRRCGEGGIVLCCDFCHLVYHPRCLEVTPGLTSLFACSDCKEEAAILEWELKGRDDAASG
Sbjct:  453 ELEEEEVALAAKMLPRWKQRHDVDCRRCGEGGIVLCCDFCHLVYHPRCLEVTPGLTSLFACSDCKEEAAILEWELKGRDDAASG 536

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BLAST of mRNA_E_fasciculatus_S2_contig8083.16240.1 vs. uniprot
Match: D7FMA3_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA3_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 7.520e-52
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0

Query:    1 ELEEEEVALAAKMLPRWKQRHDVDCRRCGEGGIVLCCDFCHLVYHPRCLEVTPGLTSLFACSDCKEEAAILEWELKGRDDAASG 84
            ELEEEEVALAAKMLPRWKQRHDVDCRRCGEGGIVLCCDFCHLVYHPRCLEVTPGLTSLFACSDCKEEAAILEWELKGRDDAASG
Sbjct:  385 ELEEEEVALAAKMLPRWKQRHDVDCRRCGEGGIVLCCDFCHLVYHPRCLEVTPGLTSLFACSDCKEEAAILEWELKGRDDAASG 468

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BLAST of mRNA_E_fasciculatus_S2_contig8083.16240.1 vs. uniprot
Match: A0A4D9DCI0_9STRA (PHD-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCI0_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.220e-8
Identity = 27/69 (39.13%), Postives = 38/69 (55.07%), Query Frame = 0

Query:    4 EEEVALAAKMLPRWKQRHDVDCRRCGEGGIVLCCDFCHLVYHPRCLEVTPGLTSLFACSDCKEEAAILE 72
            +E   L    L  +K  H+  C  C +GG ++CC+ C LVYH  CL   PG++  F C  C+EEA  L+
Sbjct:  512 DEGAELVMHRLRPFKGTHNSLCDVCLDGGELICCETCSLVYHTCCLHSPPGMSEAFYCDRCREEAYRLD 580

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BLAST of mRNA_E_fasciculatus_S2_contig8083.16240.1 vs. uniprot
Match: D8M658_BLAHO (PHD-type domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M658_BLAHO)

HSP 1 Score: 50.4 bits (119), Expect = 4.370e-6
Identity = 24/59 (40.68%), Postives = 33/59 (55.93%), Query Frame = 0

Query:   14 LPRWKQRHDVDCRRCGEGGIVLCCDFCHLVYHPRCLEVTPGLTS----LFACSDCKEEA 68
            L R+  +H   C  C + G++LCCD+C L YHP CL  +P L S     +AC  C+  A
Sbjct:    3 LQRYYGKHKPMCAICSQKGLLLCCDYCSLAYHPECL--SPPLKSQPQDFWACPRCEYHA 59

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BLAST of mRNA_E_fasciculatus_S2_contig8083.16240.1 vs. uniprot
Match: UPI001D0819DD (bromodomain adjacent to zinc finger domain protein 1A isoform X1 n=2 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D0819DD)

HSP 1 Score: 50.1 bits (118), Expect = 4.230e-5
Identity = 23/49 (46.94%), Postives = 30/49 (61.22%), Query Frame = 0

Query:   25 CRRCGEGGIVLCCDFCHLVYHPRCLEVTPGLTSL----FACSDCKEEAA 69
            C  C EGG V+CCD C ++YHP CL+  P L  +    + CSDCK + A
Sbjct: 1155 CEVCKEGGRVICCDSCSIMYHPECLD--PPLRRVPRGTWHCSDCKRKQA 1201

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8083.16240.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8083.16240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A6H5KH56_9PHAE	7.490e-52	100.00	PHD domain-containing protein (Fragment) n=1 Tax=E...	[more]
D7FMA3_ECTSI	7.520e-52	100.00	PHD domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A4D9DCI0_9STRA	3.220e-8	39.13	PHD-type domain-containing protein n=2 Tax=Monodop...	[more]
D8M658_BLAHO	4.370e-6	40.68	PHD-type domain-containing protein n=1 Tax=Blastoc...	[more]
UPI001D0819DD	4.230e-5	46.94	bromodomain adjacent to zinc finger domain protein...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 24..65 e-value: 9.1E-4 score: 28.5
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 17..71 e-value: 5.8E-9 score: 37.4
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 25..64
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 13..68

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8083	contig	E_fasciculatus_S2_contig8083:3738..5766 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8083.16240.1	mRNA_E_fasciculatus_S2_contig8083.16240.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8083 3738..5766 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8083.16240.1 ID=prot_E_fasciculatus_S2_contig8083.16240.1|Name=mRNA_E_fasciculatus_S2_contig8083.16240.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=84bp
ELEEEEVALAAKMLPRWKQRHDVDCRRCGEGGIVLCCDFCHLVYHPRCLE
VTPGLTSLFACSDCKEEAAILEWELKGRDDAASG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011011	Znf_FYVE_PHD
IPR019786	Zinc_finger_PHD-type_CS
IPR013083	Znf_RING/FYVE/PHD
IPR001965	Znf_PHD