mRNA_E_fasciculatus_S2_contig804.16202.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig804.16202.1
Unique NamemRNA_E_fasciculatus_S2_contig804.16202.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig804.16202.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 302 bits (773), Expect = 1.530e-92
Identity = 246/387 (63.57%), Postives = 277/387 (71.58%), Query Frame = 2 
Query:  434 IMPGSARNSCLEALIVALNETCDGKSWYTSTKQLQLASLDFCIACRTFPTAHLNFSEETPRRLLAAADAPPPHPKRSCWTRVPRLRARRVTWNMPTAAELRTPIFAMADVDHLEFGMHFEGGLEAVAWPQHLKTIQFHDQSGFNQPLELVQWPASLQKISXGEDXXXXXXXXXXXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWXGXXXXL-TFGSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDEEGDNGGMTMFSDXXXXXXXXXXXXXXXXXTLGHNFSQSLQGLGTWMPNLEVLRLLDYNMSDVSDSGDNNLLCGIEWPKGLRHLMLFEGKVLEEVVVPKTVQVVWSRNK 1591
            +  G  R  CLEALIVALNETCDGKSWYTSTK+LQLASLDFCIACR   T HLN  E+ PRRLLA+ADAPPPHPKR CWTRVPRLR+RRVTWNMPTAA+LRTPIFAM D+++LEFG  F   LEAV WP+HL+T++FH  S F+Q +ELVQWP  LQ ++ G D                    T    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  X XXXX  TFG+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   DE   NG M +F++                  LGH F QSLQGLGTWMPNLEVL LL Y+ S +   GD+N L  IEWPKGLRHL L EG  ++ V +P  VQV+++ N+
Sbjct:   42 VQKGPTRKFCLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTFGGDFNQPIERVKFPASLQQLIFRTSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGNRLNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWCDEFAGNG-MVIFANFDQPIGSSVGPALLRRLVLGHMFRQSLQGLGTWMPNLEVLHLLHYHGSGL---GDSNFLREIEWPKGLRHLTLLEGTSIDGVDIPLAVQVLFAYNE 424
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig804.16202.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 1.820e-88
Identity = 150/238 (63.03%), Postives = 174/238 (73.11%), Query Frame = 2 
Query:  212 HNAMEDDEGSACAGPDERGLAVASGDATKLAELALVWSGSKPERALAIARECVSLLETEVAFSAAGFSSPPPPPIMPGSARNSCLEALIVALNETCDGKSWYTSTKQLQLASLDFCIACRTFPTAHLNFSEETPRRLLAAADAPPPHPKRSCWTRVPRLRARRVTWNMPTAAELRTPIFAMADVDHLEFGMHFEGGLEAVAWPQHLKTIQFHDQSGFNQPLELVQWPASLQKISXGED 925
            +  ME D GS  A PD+ GLAVA+GDATKLAEL LVWSGS+PE AL++ RECV LLE E AFS    S    P    G  R+SCL+ L VALNETCDGKSWYTSTK+LQLASL+ C+ACR + T HL     TPRRLLAAADAP PHPKR C TRVPRLRARR TWN+PTA+ +RT IFA  DVD+LEFG  F G L+A+ WP+ LKTI+F   S  N+ L+ V WPASL+K+  G D
Sbjct:   53 YTVMEGDVGSGSASPDKWGLAVATGDATKLAELVLVWSGSRPEAALSLLRECVLLLEEEAAFSVPDSSPLQSPSCTLGPTRSSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVSWPASLRKVCLGHD 290
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig804.16202.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 6.040e-71
Identity = 163/432 (37.73%), Postives = 207/432 (47.92%), Query Frame = 2 
Query:  290 ATKLAELALVWSGSKPERALAIARECVSLLETEVAFSAAGFSSPPPPPIMPGSARNSCLEALIVALNETCDGKSWYTSTKQLQLASLDFCIACRTFPTAHLNFSEETPRRLLAAADAPPPHPKRSCWTRVPRLRARRVTWNMPTAAELRTPIFAMADVDHLEFGMHFEGGLEAVAWPQHLKTIQFHDQSGFNQP-LELVQWPASLQKISXGEDXXXXXXXXXXXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWXGXXXXLTFGSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDEEGDNGGMTMFSDXXXXXXXXXXXXXXXXXTLGHNFSQSLQGLGTWMPNLEVLRLLDYNMSDVSDSGDNNLLCGIEWPKGLRHLMLFEGKVLEEVVVPKTVQVVWS 1582
            AT+LA+L LVWSGS+PE AL+I ++CVSLLE E AFSA  F + P  P MPG +R+SCL AL++ALNETC+G+SWYTSTK+LQLASL+FC+ACR + T HL    + PRRLLA ADAPPPHP+  C TRVPRLRARRVTW M  AAEL  PIFAM DVD L+FG   E  LEA+          +H + G+ +     + +  S    S G+                                                                    W                                              + DN  + +                     LG +F QSLQGLGTWMPNLEVLRL D+   D    G+++LL GI WP GLR L ++E   ++ V +P TV+V++ 
Sbjct:   56 ATRLAQLVLVWSGSEPEPALSILKDCVSLLEKEFAFSAPAFPAVPLLPTMPGPSRSSCLNALVIALNETCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPELLCRTRVPRLRARRVTWGMRKAAELSIPIFAMTDVDCLKFG---ETSLEALRL--------WHGRDGWKRSSFSFLHYSTSRSVWSSGQHLCRRLNSVAVVIARAY--------------------------------------------------DWICDRCR---------------------------------------RKRDNDVLVL----RPTHRQPWLAYVFASTPLGDDFKQSLQGLGTWMPNLEVLRLFDFRDPDF---GNDSLLLGIGWPTGLRQLAVYECTKMDGVTIPSTVEVLYK 380
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig804.16202.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 6.800e-70
Identity = 133/221 (60.18%), Postives = 151/221 (68.33%), Query Frame = 2 
Query:  263 RGLAVASGDATKLAELALVWSGSKPERALAIARECVSLLETEVAFSAAGFSSPPPPPIMPGSARNSCLEALIVALNETCDGKSWYTSTKQLQLASLDFCIACRTFPTAHLNFSEETPRRLLAAADAPPPHPKRSCW-TRVPRLRAR-RVTWNMPTAAELRTPIFAMADVDHLEFGMHFEGGLEAVAWPQHLKTIQFHDQSGFNQPLELVQWPASLQKISXG 919
            RG AVASG ATKLAEL LVWS SKPERAL+IAR CVSLLE E A SA+G S        PG  R+SCL A++VAL+ETCDGKSWYTSTK+LQLASL FC ACR   T HL   E  PRRLLAAADAPPP  + +   TR P   A   V     +  E    +FAM DVDHLEFG  FEG LEAVAWP+ LKTI  H  S F +P++L++WP SLQ +  G
Sbjct:   70 RGSAVASGAATKLAELVLVWSVSKPERALSIARTCVSLLEKEDAHSASGSSPLXXXSTAPGPGRSSCLNAIVVALSETCDGKSWYTSTKELQLASLGFCTACRNHQTVHLKVDEHIPRRLLAAADAPPPASEAAVSDTRAPTHSASCDVEHADSSGIEEPCTVFAMTDVDHLEFGWDFEGNLEAVAWPRWLKTIDLHPWSNFGKPIDLIEWPDSLQTLEFG 290
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig804.16202.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 1.830e-67
Identity = 110/161 (68.32%), Postives = 122/161 (75.78%), Query Frame = 2 
Query:  443 GSARNSCLEALIVALNETCDGKSWYTSTKQLQLASLDFCIACRTFPTAHLNFSEETPRRLLAAADAPPPHPKRSCWTRVPRLRARRVTWNMPTAAELRTPIFAMADVDHLEFGMHFEGGLEAVAWPQHLKTIQFHDQSGFNQPLELVQWPASLQKISXGED 925
            G   N CL +LIVALNETCDG SWYTSTK+LQ ASL+FCIACR +P  HL    + PR LLAAADAPPPHPKR CWTRVPRLRAR VTWNM  AAEL  PIFA+ DVD LEFG  F+G LEAV WP+ LK I+F   S FNQPLEL++WP SLQ +  G D
Sbjct:    8 GLTHNPCLSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKWPESLQHLVLGGD 168
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig804.16202.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 5.210e-65
Identity = 202/386 (52.33%), Postives = 232/386 (60.10%), Query Frame = 2 
Query:  443 GSARNSCLEALIVALNETCDGKSWYTSTKQLQLASLDFCIACRTFPTAHLNFSEETPRRLLAAADAPPPHPKRSCWTRVPRLRARRVTWNMPTAAELRTPIFAMADVDHLEFGMHFEGGLEAVAWPQHLKTIQ---------FHDQSGFNQPLELVQWPASLQKISXGEDXXXXXXXXXXXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWXGXXXXLTFGSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDEEGDNGGMTMFSDXXXXXXXXXXXXXXXXXTLGHNFSQSLQGLGTWMPNLEVLRLLDYNMSDVSDSG-DNNLLCGIEWPKGLRHLMLFEGKVLEEVVVPKTVQ 1570
            G AR+SCL A+IVALNET DGKSWYTSTK+ QLASL+FCIACR   T  L     TPRRLLAAADAPPPHPKR C TRVPRLRARRVTW++PTAA LR  I++M D D LEF   FE  LEAVAWP+ LKT++         FHD+S F+QP+  V WP +L++++ G      XXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  X XX  + FG                                                    G + + S    X             TLG NF QSLQ LGTWMPNLE   LL +    + DSG +++ L GIEWPKGLR L +     L  VV+P TV+
Sbjct:    6 GPARDSCLNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLKTVEVSGIAEVAKFHDKSLFDQPIAGVVWPDTLEQLTFG--LFLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVCFGVRQEVL----------------------------------------------GDVVVTSKFNRXIGASAWPKAMHRLTLGQNFRQSLQELGTWMPNLETFHLLHH----IHDSGTEDSFLRGIEWPKGLRQLAVCRLSSLAGVVIPSTVE 339
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig804.16202.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 2.500e-58
Identity = 103/157 (65.61%), Postives = 123/157 (78.34%), Query Frame = 2 
Query:  440 PGSARNSCLEALIVALNETCDGKSWYTSTKQLQLASLDFCIACRTFPTAHLNFSEETPRRLLAAADAPPPHPKRSCWTRVPRLRARRVTWNMPTAAELRTPIFAMADVDHLEFGMHFEGGLEAVAWPQHLKTIQFHDQSGFNQPLELVQWPASLQKI 910
            PG   N+CL A+ VAL ET DGKSWYTSTK+LQLASL+FC+ACR + T HL      PR LLAAAD PP HPKR    RVPRLRAR VTWNMPTAAELR+PIFA+ D+DHL+FG  FEG LEAV WP+ L++I FH+ S FN P++LV+WPASL+++
Sbjct:   29 PGPTSNTCLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPIDLVKWPASLKRL 185
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig804.16202.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 3.200e-52
Identity = 250/404 (61.88%), Postives = 283/404 (70.05%), Query Frame = 2 
Query:  497 CDGKSWYTSTKQLQLASLDFCIACRTFPTAHLNFSEETPRRLLAAADAPPPHPKRSCWTRVPRLRARRVTWNMPTAAELRTPIFAMADVDHLEFGMHFEGGLEAVAWPQHLKTIQFHDQSGFNQPLELVQWPASLQKISXGEDXXXXXXXXXXXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWXGXXXXLTFGS--------------------------------------------WXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDEEGDNGGMTMFSDXXXXXXXXXXXXXXXXXTLGHNFSQSLQGLGTWMPNLEVLRLLDYNMSDVSDSGD-NNLLCGIEWPKGLRHLMLFEGKVLEEVVVPKTVQV 1573
            CDGK WYTSTK+LQ ASL+FCIACR + T  L    +TPR LLAA DAP PH KR C TRVPRLRARRV WNMPTA EL++PIFA+ DV  L+FG  FEG LE+VAWPQ LK I F   S FNQP+E V++P SL ++   + XXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  X XXXX  + S                                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  + +G +  + MFS+ XXXXXXXXXXXXXXX TLGH F QSLQGLGTW+PNLE+   LD++    + SGD ++LL GIEWP GLR L +F    L+ V++P TV+V
Sbjct:    2 CDGKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGVEFPPSLLELRLSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYRSRXXXXXXXXXXXXXXXXXXXGEAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHESQGFDHAI-MFSEFXXXXXXXXXXXXXXXLTLGHKFRQSLQGLGTWIPNLEIFHFLDHS----NGSGDEDSLLRGIEWPTGLRQLAVFRDSRLDGVIIPSTVEV 400
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig804.16202.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.430e-48
Identity = 248/442 (56.11%), Postives = 274/442 (61.99%), Query Frame = 2 
Query:  434 IMPGSAR-NSCLEALIVALNETCDGKSWYTSTKQLQLASLDFCIACRTFPTAHLNFSEETPRRLLAAADAPPPHPKRSCWTRVPRLRARRVTWNMPTAAELRTPIFAMADVDHLEFGMHFEGGLEAVAWPQHLKTIQFHDQSGFNQPLELVQWPASLQKISXGEDXXXXXXXXXXXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL---------------------WXGXXXXLTFGSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL---------DEEGDNGGMTMFSDXXXXXXXXXXXXXXXXXTLGHNFSQSLQGLGTWMPNLEVLRLLDYNMSDVSDSGDNNLLCGIEWPKGLRHLMLFEGKVLEEVVVPKTVQVVWSRNKYFRQCPP*QPKGLILPRGAAFSAVT 1666
            I+P   R +S  + LI+ALNE CDGK WYTSTK+LQLASL+FC+ACR +    L    +TPR LLAA DAPPPH KR C TRVPRLRARRV WNMPTA ELRT +FA+ DV+ L FG  F G LEAV WP  LK I F   S FNQ        ASLQK+     XXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       X XX   TF   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           D EG    + M S                  TLGH F +SLQGLGT MPNLE   LLD+     + SG  + L GIEWPK LRHL++F    L+ VV+P   + + S     R      P+ L +  G A  AVT
Sbjct:    7 ILPAGRRCSSGSKDLILALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIFFS-SEFNQXXXXXXXXASLQKLDLENSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLKEDVEXXXXXXXXXXXXXXXXXXEWATFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHDGEGFENAV-MLSAFNQRVDMCEWPVSMRRLTLGHKFKESLQGLGTRMPNLEAFHLLDHR----NGSGSEDSLRGIEWPKVLRHLVVFSNSSLDGVVIPFNCRGLASLK---RSPVVVMPRSLWVVLGEAVFAVT 439
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig804.16202.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.800e-18
Identity = 61/163 (37.42%), Postives = 93/163 (57.06%), Query Frame = 2 
Query:  437 MPGSARNSCLEALIVALNETCDG--KSWYTSTKQLQLASLDFCIACRTFPTAHLNFSEETPRRLLAAADAPPPHPKRSCWTRVPRLRARRVTWNMPTAAELRTPIFAM-ADVDHLEFGMHF-EGGLEAVAWPQHLKTIQFHDQSGFNQPLELVQWPASLQKIS 913
            M   A+  CL+A +VAL++  +G  K WYTST QLQLASL+FC ACR+ P  H+    ETP  L +   A   +P     TRVP ++A  +TW  PT + L +    +   ++ L+  +      L++V WPQ L+ +   D + F  PLE++ WP+SL+ ++
Sbjct:    1 MTSEAQRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQA---NPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVM-DCTVFIIPLEMMSWPSSLKSLT 159
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig804.16202.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.530e-9263.57protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.820e-8863.03protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.040e-7137.73protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.800e-7060.18protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.830e-6768.32protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.210e-6552.33protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.500e-5865.61protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.200e-5261.88protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.430e-4856.11protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.800e-1837.42protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig804contigE_fasciculatus_S2_contig804:9736..16787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start1
Model size1972
Hectar predicted targeting categoryother localisation
Exons4
Cds size1395
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig804.16202.1prot_E_fasciculatus_S2_contig804.16202.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig804 10093..14295 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842465.3788383-UTR-E_fasciculatus_S2_contig804:9735..100921696842465.3788383-UTR-E_fasciculatus_S2_contig804:9735..10092Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig804 9736..10092 -
1696842465.4290726-UTR-E_fasciculatus_S2_contig804:14295..143221696842465.4290726-UTR-E_fasciculatus_S2_contig804:14295..14322Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig804 14296..14322 -
1696842465.442967-UTR-E_fasciculatus_S2_contig804:16594..167871696842465.442967-UTR-E_fasciculatus_S2_contig804:16594..16787Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig804 16595..16787 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842465.3905-CDS-E_fasciculatus_S2_contig804:10092..112641696842465.3905-CDS-E_fasciculatus_S2_contig804:10092..11264Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig804 10093..11264 -
1696842465.4048474-CDS-E_fasciculatus_S2_contig804:13315..135011696842465.4048474-CDS-E_fasciculatus_S2_contig804:13315..13501Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig804 13316..13501 -
1696842465.418044-CDS-E_fasciculatus_S2_contig804:14258..142951696842465.418044-CDS-E_fasciculatus_S2_contig804:14258..14295Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig804 14259..14295 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig804.16202.1

>prot_E_fasciculatus_S2_contig804.16202.1 ID=prot_E_fasciculatus_S2_contig804.16202.1|Name=mRNA_E_fasciculatus_S2_contig804.16202.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=465bp
MEDDEGSACAGPDERGLAVASGDATKLAELALVWSGSKPERALAIARECV
SLLETEVAFSAAGFSSPPPPPIMPGSARNSCLEALIVALNETCDGKSWYT
STKQLQLASLDFCIACRTFPTAHLNFSEETPRRLLAAADAPPPHPKRSCW
TRVPRLRARRVTWNMPTAAELRTPIFAMADVDHLEFGMHFEGGLEAVAWP
QHLKTIQFHDQSGFNQPLELVQWPASLQKISFGEDFDQPMEHVEFPASMR
QLIFSTFSCFNQSIAGAILPVSLQLLALGEYFNQPIEEVLWPGSLQQLTF
GSWFDQPIEGVSWPDSLQTLGFGEMFNQPVDNVRWPSSLQDLRFGSLDEE
GDNGGMTMFSDFNQRIDHSIWPTSLRRLTLGHNFSQSLQGLGTWMPNLEV
LRLLDYNMSDVSDSGDNNLLCGIEWPKGLRHLMLFEGKVLEEVVVPKTVQ
VVWSRNKYFRQCPP*
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mRNA from alignment at E_fasciculatus_S2_contig804:9736..16787-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig804.16202.1 ID=mRNA_E_fasciculatus_S2_contig804.16202.1|Name=mRNA_E_fasciculatus_S2_contig804.16202.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7052bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig804:9736..16787- (Ectocarpus fasciculatus EfasUO2)
GCCAGTTCATCCGCACGAACTTCACCCCACCCCTGAACACTGCGGTTTGC
GGCCCCCCTTGCAAACACTCGTGTCTCGGCACTCAACCGCTCGCGCACGA
CCAAACACTCGGTCCTCGGCAAAACGGCAGAGGCGAGCAAGGGAGAGAGG
AGAGGGCAGTAGGAGGCGTAGGGAGGAAACAACTACAATAGAGGTGAGGC
CTGGCTGCGGCTGTAGGTAGTGCCTGTGGCTTCCTCGGGCGTAGCTGCCG
ACGGGGCGCCGTAAAATCAGGTTGAGATGGTGAGCCCTGCCATCCTGCCA
TCCTGCCATCCTGCCATGTAGAGGCATGTATCATGTGTTGTAGCTACGTG
TTGCACACCACACGAGTTCAGAGGTTTGGTTGGGGGCCTGGTTGTGGCCA
AGAGTATTCTGGCTTCGATCTTGCCCAATTGTGGGCAGCAGGCAAATGTG
CTGCGTAAGAACCCAGCGAGATGCAGGTTGTGCATACGGCAGCACATGTT
TATTTTTTTATTTTTTCTCCCATCATTGGATTCTGTCGTCTGCCCCTCTG
GCCCCCTCCACTTCTACTAATAGCTAGACGACCCAACCGGGGTCATATAG
GAGGGGTGTGTACTGCTGTAGGTCCAGACAAATAATCGCATTCGCTCTAC
TGCTGTACACCAGTCCCGAAGGACGAAGGCTCAACTTGGTTTCAGGCAGA
AATGCGCCCCAATAATGCATGGGGACATGTGGACACTTTCCATACCGCGG
ACAAGTCAGCAATAGTCGGCATTTTTTTTTCCCCCAGGCTATGCAGACTA
TACTATCATGGGGCACGCGGCATGGGAGATGTTTTGAGCAAAAGCCAGAG
GCCACGGCAAAGCATCACACATTACACAGCAGCCTATCACACAGCGTACC
ACCCCACACAAGCATGGCACACCAAAGGTTTCCCATCTGCCGTTCACACC
GTATAACCTAATGACGACAACGTGGCGGAAACAGGCATTTTGTGCGTTGT
CGTTCCGTACAAGAATACTTCCCGTGGTTGCACAGCTCCTCCGAGTTGTT
GTCTCTTTGACTTTGTTGTGAAATCAAGTATATCGCAACCAATCCATCTC
TTCTCACAGATGCGAGTCCCGGAAAGTTTGCGATGAGCCCGTACCATTAG
CGGAGCACTAGAGTACCGGTTTCTCTACGGTTCCCCGAGCAACACAGCGA
GTCTTCCCTTTGGGCAGCCGGCGGTACAAGACAGTTTGATGGTACCTTGC
GCACCAAGTACTGCATCTGACTGTATTTGATGCCTGGAAGGGGAAAAGGA
AGACGTGGGGAAAAAAGCCTGTTGTATGTCGCGCCTTTGAAAAAACAGCA
TGCATACAGCCTTTTACTCCCTGCTTCCATGTTGGTCCTTATTTTGTGGC
GCTAGAATGTGGTGTCATGGTTGCAGCATATACAGTGGTATGGGGTGAGT
GTCAGCAGGCGCGCCATGGCAGGTGTACGCAAACAGCTTGGGGTGTACGC
CTGTCGGCGGGGACTTATTCGACACGTGCTGGAGGCCACGTGTAAACTTC
AGTGTAGCACACATCTGTGGTTTTGGGAGGATGCCCTGCGTCGGTCACGC
TAGTTGTGGAGCAGAGCAACAGCACCTTCATACAGCCGTGACCCGTCCTC
ATCAAGTCCAGATTATTTGCGCCAACGACTGGATTCGAAACGCTGGCTGC
TCGGCCAACCACGCCACGTGCTAGCGTACATAGCTCAAACACAATGGCTG
CTTGCTGATATCTTTCTCCATCACGCTTTTTTTTTCCGGCACACATTGGC
TGGCTCTTGCGAAGGTTGGCTGTTATTTCCCACCCGTCGAATAAATCGTG
CGGGAAGGTGATGTTGAGTAACGTTGGTGAACAATTATTTGTTTCTCACG
GACCGTTGCCGTTCATAGCGGACATGACCTCATTTGTGCTACGACTGTTG
GTTTGGCTTTCGCCAGAAAAAGGTAAACCACATGCAATTCTTGGGCTTCC
CTGAGGGAGTCTGAGGTCTTGCCGCCCGCTGGCGACCCCATAAGACATTA
CCGCTGCTCTGCACGTTATCCTCCACTGGTGCCGCTTGAGTTTTTGTCCT
TGCACGAAGATATTTGTACCATTTGCTTTGCCGTTCGTGGCGTGCGTACG
GGTCAGCCCTGCGCAGAACACATGCCCAAACCTTGGACAAGCGTGGAATA
TCACCCAGGTTGATCTGTTCCTTGTGGAACCGATGGGATTATTACCACGG
TGTTTTTTTCAGGCCTGATTCCTTCAATACACCAGCTTCCAGCTTTTGTC
ATCTCAGTGGCTTTTTTTTTTTTTTTTCTTATTTTTTGATGGTGGCCAAT
CATTCGTGCCACCCGTCTTGACCGGTCGAGACTGCTGCAATCAGTAGTAG
CGACAAACTCATCAACACTTCGATATTCGTGGCCCCCTCTTCTCGTGCTG
CTTCCCTTTGGAAAGGTCCGCATACGAGGCAGACACAACGCCATGGAGGA
TGATGAGGGTTCGGCGTGCGCAGGGCCAGGTGTGAAAAATGCTAGCTAGA
AATGTAGAAAGGTGTTTCGGGTTATGGCGTCGTTATGACCAATAGGGTTC
GAGAGTCACAAATATCGTGTAAAACATTTTTCGTTCTCTATTTCTTGCGT
TCAACTTTATGCGCTGCTCTGCTGTAATGAGCATGGCGGGTTTCAAGCGC
GCAGTTTCAGTTTCAGCGTGGGTCCTGTTCTGACGCAACATATTTCGTCT
TGACGCATGTGTAGTGGTACGCCCTTCGTTGTGTTGACTTTGGTGGTACT
CCAAGGCTAGCAACTATATTACACTCTTTTACAAGGAGGTGGGTTCTTGT
AGCCAATAGAAGGCTATGTCATGCGCATCACACTCGATCGAGGACAATGT
GAGCATCCCCATGGAGCGAATATCTCGGGGCAATCGAGGGTGGCATTGAA
ACCAACAGATGTTTAGAAATTGTTTCTACTTCGGACTCGAGCGACAAATG
TCTTGGTGACTGGCTCGTAACGGGAAAAAGAACATGGTGTGCAAACGAGG
AATCAATATTTATGTACACGTCGACTCTGACGCTCGGGAGAATCGTCGGA
ACGGTGGATTCGCAATGCGACGAAGTGCCATGCTGAGGTTTACGGGTTCG
TTTGATTTTCTTTCGAGGGAGATCGCCGTATTTGGAAATTTTGAGGACGG
TTCATGCCCATCCTTGGTCTCAGTGCGCGAGAAATCCTAAACCAGCAATT
ACCTTTGAATACACCGGCAAATGGACGATTCTGCAGATGAACGTGGTTTG
GCCGTGGCGAGCGGCGACGCGACCAAGCTAGCCGAGTTGGCGCTGGTTTG
GTCCGGTTCGAAGCCCGAACGGGCTCTGGCGATTGCTAGAGAATGCGTCT
CTTTGCTGGAGACAGAGGTTGCGTTTTCCGCTGCGGGTTTCTCTTCCCCT
CCTCCCCCCCCGATAATGCCTGGTGAGTGTTGGAGTTCTTGAATTTGTCT
GCGCTGTCACCGACTTGAGGAGACATCACAAGGCTTTTTTTGGCTGTTGG
CTGGGGTCTGTTTCGTGCGAGCCTCGGTCTGCCCGTCAGGGAACCGTACA
GAGTTCTGGGCGAAGCTTGCAGCGACACTGGCCTTTCGTTAGAAATGTTT
TTTTCTCGCGGGTTGGACCGTAACGTGTCGTCCCACGATTTGACGGACAT
TGCGACCTTGTCAAAATATTTGTTACTCACCGTGTGGGGGGAAATATTGT
TCTGGGCAAGGAATGATTGTGCAATGTTTTTCTCGTAGTCTCTCTTTCAA
GCTGATGGGAATGATCGTCCCCTTTCCGGCCCTAACGGCAACAAACACAC
ATACCTATCGACCCAACAGCTGATTCCAACCGCTTGCCCCTCACTCCGTA
GTCAGCAAACAGAGATCACGCCCTCACCGTTGTGATCTACATTCACTGAT
GTATTTATTGTGCATGCGAGTCCACTTTGCATGCGAATGAGGCCGGTTTG
TTGAAGAGGTAGCGCCGAAGGGTCCGGCTCAACCCATCAACTAAGGTGTG
AGATATTTGAACGGGTGTTGGACAGTATGTTGACGCACGGTCGTAGACGC
CAGGGCCAACACTTTCGCTATCCGTGTGCTTTGAATGGGTTTCTCCGCCA
TTAGAGCGCTTTGGATATGTTTCTCCGTCCGGCATCAGGTTTCTCGGCTC
GTCGCGTCCTTCGCGTCGGTAGTGAACCTAGTTTGCCACGCGCACACTTC
CTAACGCTATGGGCGAAAAGGTTGACCGAGACCTATTCCCCGCCGTGCCA
TCTCGGTGCTTTCCGCTTGAGCAGCCACTCAACGGCACTCGCGGTGGCCT
TGGCCAGTGAGCACGGGGCTTCGAAGTCAAAGTTCCGTTTTTTTGCTCAA
CATATTCCCCCGATATGCCGTTTTCTGGCGGCTTCCTGTTTCGAAACGTA
CAAAGCCTGATGTAGTGTACTCAGTCAATGGACATAATATATGCGTGCAC
TCGTGCCTCTTTATTCCCAGCCGCCTCCCACTCTGGTCATTCCGTCTCGC
ATATACCCTCTCTGGCACACTCGCGAGGATATCTGTGTTCTGCAATTACG
GGTGAAGCACCAAGGGTATCTCACAGATCGCACGCCAATGCGCAATCCTT
TCTCGAGAGACCACTTGCGACAGAATCTCGTGAGGGCAGTCTCCGCTTAG
CGACACACGAGCATTCTTGATCCTTTGGTTTTCGGTTCTCCGATGATGAA
AGTCATGAAGACCTAATCAGAATATGCTCTTCACCCAAACCTTCTTCGTT
CGGCCCAATGATGTTTGTTTTTTGGAGGGCAGCAGCTTGGCCCCTTGGTC
CCATGTTTGCCACAATCAAGATTTGGCCCCGAAATTCCACCCGGTGTAAC
CTCTCATATATACAAGATCTGGCTCCGACAACCGGACGGTTTATCTTGAA
GAAATTTACCTCTCTCATCGTCCTCGCGTGCACTTTTCGGTGGACTCTAC
TATAGCAGAGGTCGTTCCTCGCAATCCACGAAAACGGTTGCTGGTGTTGG
CACAATATCCTCCCGCTGTTTATCCGAACAGCATACGTTTTTGTCTCCGT
TGAACTTTCTTCTCAACCTACCTCTTTCGCTAAAGAGATGGTTAGTTGGT
GCTACGGCATCTCCACTCTGGCCCGTCCAGTCCGAACCAGTCCAATTCCT
CTTAATAGGTTTGTCCGAATCAAACATGTTGAGTGGTCATGTGGTGTTCT
TGCACCTTGCTTTCCCCAGGTCGACCGTGGCCTCGCCGGCAATTGTGTTG
TCTATCGGGATCCTTTGTGTGACGAATGGTATACTTTGTTGTTGACCCCT
CCAGCGTAGCACGCTTAAGTTGTCGCCAATGAGAAATTACCCGGACGCTC
TTCACGTTGTGGCGTTGTGTTGACCAGTTGCAGACTCTACCGCCACGGGC
TGAACATTATGCCGAAGACGCCATTGGTGTGCCCTAGCTTATGTACGCTC
ATACACTGCATGTTGATCCGCAGGATCTGCTCGCAACTCCTGCTTGGAAG
CCCTCATCGTTGCTCTGAACGAGACGTGCGATGGGAAGAGTTGGTACACC
TCGACCAAGCAGCTGCAGCTGGCGTCTTTGGACTTTTGTATTGCATGCAG
GACCTTTCCGACCGCGCACTTGAATTTCAGCGAAGAAACTCCGCGCAGGC
TGCTGGCCGCTGCCGATGCTCCCCCACCGCACCCGAAGCGATCATGTTGG
ACACGTGTGCCACGGCTACGAGCGCGCCGCGTGACGTGGAACATGCCGAC
AGCAGCGGAGTTGAGAACTCCGATATTTGCAATGGCGGACGTAGACCACC
TGGAGTTTGGCATGCACTTCGAAGGAGGACTCGAGGCTGTGGCATGGCCG
CAACACCTGAAAACAATCCAGTTTCACGACCAGTCGGGATTCAACCAGCC
TCTCGAGCTGGTACAGTGGCCAGCATCCCTGCAGAAGATCAGTTTCGGAG
AAGATTTCGACCAACCGATGGAACATGTCGAGTTTCCCGCATCGATGAGG
CAGCTGATATTCAGCACGTTTTCTTGTTTCAACCAATCGATTGCCGGAGC
AATTCTGCCGGTTTCGCTACAGTTGCTTGCCTTGGGGGAATACTTCAATC
AGCCGATCGAGGAAGTTTTGTGGCCGGGATCGCTGCAGCAGCTGACATTC
GGGAGCTGGTTCGACCAGCCTATTGAGGGCGTTTCATGGCCAGATTCCCT
TCAGACGCTCGGCTTCGGAGAGATGTTTAACCAGCCGGTTGACAACGTGA
GGTGGCCGTCGTCGTTGCAAGATTTGAGATTTGGATCTTTGGACGAAGAA
GGGGACAATGGTGGGATGACGATGTTCTCGGACTTCAACCAGCGCATCGA
CCACAGTATTTGGCCTACGTCGCTTCGGCGACTCACCCTAGGCCACAACT
TCAGCCAGTCACTGCAAGGACTGGGCACTTGGATGCCCAACCTTGAAGTA
CTTCGTCTTCTCGACTACAATATGTCTGATGTTTCTGATTCAGGTGACAA
TAACCTTCTCTGCGGCATCGAATGGCCGAAGGGCCTTCGTCATCTTATGC
TGTTCGAAGGCAAGGTCTTGGAGGAGGTCGTCGTTCCTAAAACTGTACAG
GTCGTGTGGTCCCGTAACAAGTACTTTAGGCAGTGTCCACCGTAGCAACC
TAAAGGTTTGATCCTGCCGAGGGGGGCAGCATTTTCCGCAGTCACATGGT
TTACTCTCATGGAGAACGTGCATGATTTTGAGCGAAACGTACGGTTGAGA
GATAACTGGAGGTGTTCGCCCAAGAGAACGTTTCGGTCCCTAGAGGTGGT
GAAACATGTGAATGAATGAGTGCGTCAATGATCGGCTGCCTGATCACGTT
CAGTCGGAAGCCCCGAACGTCCGAGGCGTGATGAATCACACCATCGGCCG
TCAGGAAGTTTGAGCTTGATTGGTGCCTCTCCGTCAACGTTGGCCATGTC
TGTGTTCGGGCGACTCACGCGAGAAATACAAGCATGCAGCAGGTGCTCTC
GG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig804:9736..16787-

>mRNA_E_fasciculatus_S2_contig804.16202.1 ID=mRNA_E_fasciculatus_S2_contig804.16202.1|Name=mRNA_E_fasciculatus_S2_contig804.16202.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1395bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig804:9736..16787- (Ectocarpus fasciculatus EfasUO2)
ATGGAGGATGATGAGGGTTCGGCGTGCGCAGGGCCAGATGAACGTGGTTT
GGCCGTGGCGAGCGGCGACGCGACCAAGCTAGCCGAGTTGGCGCTGGTTT
GGTCCGGTTCGAAGCCCGAACGGGCTCTGGCGATTGCTAGAGAATGCGTC
TCTTTGCTGGAGACAGAGGTTGCGTTTTCCGCTGCGGGTTTCTCTTCCCC
TCCTCCCCCCCCGATAATGCCTGGATCTGCTCGCAACTCCTGCTTGGAAG
CCCTCATCGTTGCTCTGAACGAGACGTGCGATGGGAAGAGTTGGTACACC
TCGACCAAGCAGCTGCAGCTGGCGTCTTTGGACTTTTGTATTGCATGCAG
GACCTTTCCGACCGCGCACTTGAATTTCAGCGAAGAAACTCCGCGCAGGC
TGCTGGCCGCTGCCGATGCTCCCCCACCGCACCCGAAGCGATCATGTTGG
ACACGTGTGCCACGGCTACGAGCGCGCCGCGTGACGTGGAACATGCCGAC
AGCAGCGGAGTTGAGAACTCCGATATTTGCAATGGCGGACGTAGACCACC
TGGAGTTTGGCATGCACTTCGAAGGAGGACTCGAGGCTGTGGCATGGCCG
CAACACCTGAAAACAATCCAGTTTCACGACCAGTCGGGATTCAACCAGCC
TCTCGAGCTGGTACAGTGGCCAGCATCCCTGCAGAAGATCAGTTTCGGAG
AAGATTTCGACCAACCGATGGAACATGTCGAGTTTCCCGCATCGATGAGG
CAGCTGATATTCAGCACGTTTTCTTGTTTCAACCAATCGATTGCCGGAGC
AATTCTGCCGGTTTCGCTACAGTTGCTTGCCTTGGGGGAATACTTCAATC
AGCCGATCGAGGAAGTTTTGTGGCCGGGATCGCTGCAGCAGCTGACATTC
GGGAGCTGGTTCGACCAGCCTATTGAGGGCGTTTCATGGCCAGATTCCCT
TCAGACGCTCGGCTTCGGAGAGATGTTTAACCAGCCGGTTGACAACGTGA
GGTGGCCGTCGTCGTTGCAAGATTTGAGATTTGGATCTTTGGACGAAGAA
GGGGACAATGGTGGGATGACGATGTTCTCGGACTTCAACCAGCGCATCGA
CCACAGTATTTGGCCTACGTCGCTTCGGCGACTCACCCTAGGCCACAACT
TCAGCCAGTCACTGCAAGGACTGGGCACTTGGATGCCCAACCTTGAAGTA
CTTCGTCTTCTCGACTACAATATGTCTGATGTTTCTGATTCAGGTGACAA
TAACCTTCTCTGCGGCATCGAATGGCCGAAGGGCCTTCGTCATCTTATGC
TGTTCGAAGGCAAGGTCTTGGAGGAGGTCGTCGTTCCTAAAACTGTACAG
GTCGTGTGGTCCCGTAACAAGTACTTTAGGCAGTGTCCACCGTAG
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