prot_E_fasciculatus_S2_contig7931.16094.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7931.16094.1
Unique Nameprot_E_fasciculatus_S2_contig7931.16094.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length457
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs. uniprot
Match: A0A6H5JH10_9PHAE (BRCA-2_helical domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH10_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 4.690e-91
Identity = 244/452 (53.98%), Postives = 263/452 (58.19%), Query Frame = 0
Query:    1 MESQAKGFRASRLPTTGARRHQQATPKSGGKPFRPPSAVRKARALHDADGFSGPVVPAPGSRGQAGTSAASLTAASSGVTAGEGVMKTVPPAAGGGTAALRAGVDGDDGSDVAKVSREEQTKAPSLATTSGGRGG------------------DGGGVR---GFVETLTKAVDDDADAGAASAGVDGVGSFTGATTTTPQTSGRQPQTRRRKESTDIQSLEDVGPAVAPGGAAEXXXXXXXXXPSGFITGGGRPVHVSAEALLKAKRLLADASGDDDIESAAGAERGDQEGATAARPGASPVLAQSTTIRASAQGRTILASGTGMPDARQGGNGWQGSAGGDTKPSAVXXXXXXXXXXXX--FSTGSGRRVEVSPEALERARQMFAECEAATPSGSGGRGGDENPPPATGGSDAGGGVGXXXXXXXXXXXVVXXXXXXXXXXGVFSTGRGKL 429
            MES   G RASR P  GARRHQQATP+SGGKPFR PSAVRK RA  D DG  GPV PAPG RGQA TS  S T AS+G   GEGV+  V PAA  G     A                                                   D GG+    G  +TL +AVDDD DAG  SAG +  GS T ATT  PQTSGRQPQT  R  S D+ S  D GPA  P GAAE          S FITGG RPVHVSAEALLKAKRLLADASGD+ +E+AAG ER DQEGA+AAR GA P  +QSTT RA AQG  I ASG  M DAR G + W G  G D KP  V              F TG+GRRVEVSPEALERARQ+ AEC+AATPSG+G RGGD NPPPA GGS    G+G        XX      XXXXXXXGVFSTGRGKL
Sbjct: 2137 MESPMTGLRASRPPVAGARRHQQATPRSGGKPFRRPSAVRKPRAQGDTDGIPGPVAPAPGLRGQAATSEGSPTKASAGGAGGEGVIAAVSPAASAGKGRSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGGLAKPGGSADTLAEAVDDD-DAGEESAGENEAGSITDATTA-PQTSGRQPQTMTRS-SADVDSSRDEGPAADPRGAAEAPAPPTAAA-SRFITGGARPVHVSAEALLKAKRLLADASGDE-MEAAAGVEREDQEGASAARRGAPPAFSQSTTKRAGAQGPAIPASGIDMSDARLGVDDWNGHGGRDAKPPVVGRGNGDSGGGSAGGFLTGNGRRVEVSPEALERARQVLAECKAATPSGAGSRGGDGNPPPAIGGSXXXXGIGGSGLGGVVXX--ARGSXXXXXXXGVFSTGRGKL 2581          
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs. uniprot
Match: D8LCN1_ECTSI (Breast cancer 2 like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN1_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 1.010e-87
Identity = 241/429 (56.18%), Postives = 252/429 (58.74%), Query Frame = 0
Query:    1 MESQAKGFRASRLPTTGARRHQQATPKSGGKPFRPPSAVRKARALHDADGFSGPVVPAPGSRGQAGTSAASLTAASSGVTAGEGVMKTVPPAAGGGTAALRAGVDGDDGSDVAKVSREEQTKAPSLATTSGGRGGDGGGVR---------------------GFVETLTKAVDDDADAGAASAGVDGVGSFTGATT--TTPQTSGRQPQTRRRKESTDIQSLEDVGPAVAPGGAAEXXXXXXXXXPSGFITGGGRPVHVSAEALLKAKRLLADASGDDDIESAAGAERGDQEGATAA-RPGASPVLAQSTTIRASAQGRTILASGTGMPDARQGGNGWQGSAGGDTKPSA---------VXXXXXXXXXXXXFSTGSGRRVEVSPEALERARQMFAECEAATPSGSGGRGGDENPPPATGGSDAGGGVG 396
            MES A G R SR P  GARRHQQATP SGGKPFR PSAVRK RA  D DG  GPV  APG RGQA    AS T AS+GV A EGV+  VPPAA  G                                                                  G  ETL +AVDDD DAG ASAG +   S T A     TPQTSGRQPQT RR  S D+  L D GPA  P GAAE          SGFITGGGRPVHVSAEALLKAKRLLADASGD+ IE+ AG ERGDQEGA AA R GA   L+QSTT  A AQG  I ASGTGM DARQG + W GSAGGD KP A          XXXXXXXX    F TGSGRRVEVSPEALERARQMF ECEAATPS +GGRG DENPPPA GGS    G+G
Sbjct: 1893 MESPATGLRTSRPPAAGARRHQQATPGSGGKPFRRPSAVRKPRARGDTDGIPGPVA-APGLRGQA---EASPTNASAGVAAREGVIAAVPPAASAGKGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKPGGSAETLAEAVDDD-DAGEASAGENXXXSITNAXXXXATPQTSGRQPQTMRRS-SADVDFLRDEGPAADPRGAAEAPAPPTAAA-SGFITGGGRPVHVSAEALLKAKRLLADASGDE-IEAVAGVERGDQEGAAAAARRGAPLALSQSTTKLAGAQGLAIPASGTGMSDARQGEHDWNGSAGGDAKPPAEGXXXXXXXXXXXXXXXXSVGGFLTGSGRRVEVSPEALERARQMFTECEAATPSSAGGRGCDENPPPAIGGSXXXXGIG 2313          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JH10_9PHAE4.690e-9153.98BRCA-2_helical domain-containing protein n=1 Tax=E... [more]
D8LCN1_ECTSI1.010e-8756.18Breast cancer 2 like n=1 Tax=Ectocarpus siliculosu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002093BRCA2 repeatPFAMPF00634BRCA2coord: 336..364
e-value: 8.8E-9
score: 34.9
coord: 223..250
e-value: 6.3E-6
score: 25.8
IPR002093BRCA2 repeatPROSITEPS50138BRCA2_REPEATcoord: 333..367
score: 11.6
IPR002093BRCA2 repeatPROSITEPS50138BRCA2_REPEATcoord: 219..253
score: 9.273
IPR015525Breast cancer type 2 susceptibility proteinPANTHERPTHR11289BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2coord: 222..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7931contigE_fasciculatus_S2_contig7931:179..1868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7931.16094.1mRNA_E_fasciculatus_S2_contig7931.16094.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7931 2..6992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7931.16094.1 ID=prot_E_fasciculatus_S2_contig7931.16094.1|Name=mRNA_E_fasciculatus_S2_contig7931.16094.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=457bp
MESQAKGFRASRLPTTGARRHQQATPKSGGKPFRPPSAVRKARALHDADG
FSGPVVPAPGSRGQAGTSAASLTAASSGVTAGEGVMKTVPPAAGGGTAAL
RAGVDGDDGSDVAKVSREEQTKAPSLATTSGGRGGDGGGVRGFVETLTKA
VDDDADAGAASAGVDGVGSFTGATTTTPQTSGRQPQTRRRKESTDIQSLE
DVGPAVAPGGAAEAPPPPTAAAPSGFITGGGRPVHVSAEALLKAKRLLAD
ASGDDDIESAAGAERGDQEGATAARPGASPVLAQSTTIRASAQGRTILAS
GTGMPDARQGGNGWQGSAGGDTKPSAVGGGSGGGGSAGGFSTGSGRRVEV
SPEALERARQMFAECEAATPSGSGGRGGDENPPPATGGSDAGGGVGGSGI
GGGGIGGVVGGPGGGGTEGGVFSTGRGKLATAALPSLRPDGLRVPCSRLP
PPLPPQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015525BRCA2
IPR002093BRCA2_repeat