mRNA_E_fasciculatus_S2_contig7931.16094.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs.
Match: Breast (cancer 2 like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN1_ECTSI) HSP 1 Score: 686 bits (1769), Expect = 4.630e-209 Identity = 570/778 (73.26%), Postives = 587/778 (75.45%), Query Frame = 3
Query: 1443 FDRKGQVGNSSTAFSPPGRAKSAMLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAAGVSXXXXXXXXXXXSSGG----MGAVTTPNSVAKRRVFRGGYGGGLHAMKRPRPSSAAASAASESTPAGSAAVPSPMRALRTPRGLRVGGGXXXRGAFPRPSPSRHSGVVVEGRSSGGVVRGAGKTAAVAGSISP-LPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPLSSLLDTPPQVPGDPQXXXXXXXXXXXXXR--SGDVSHGQVAAGEATANEAMEASAGGGLDGGPYNRVATVRGDGSRETRTGTGLRKAPAASA------ARGTREA-------AANSTSAVAALLRQVTARNACDLFFGAGGRPLRFAPPASAGAASSSTFMPPLSP------AIARDESGSRLEGGESEEGGTRVVSGPSAATAAAAAPRSFRDELLRSGRDGQLATPTWVKNHTRWIVWKLAAMERRFPGHFPGGYLTAERLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYTPEELGGREGGAAAVVEVTDGWYPIDVALDGALAHFLRRGKGKITPGTKLAIANASLEAGAGPIDTKNGTATTNGGGG----------AANPMDPLELLRRRDAGEFPPGAGPRLRLAVNSCRRARWDARLGFFWPRQGRRAGE-GEPGGVEPAALEVPLCTVVPGGGVVSATRVIVLRRYPA 3665
FDRKGQVG S TAFSPPGRA+ AMLP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX +G VTTP SVAKRRVFRGGYGG LHAMKRPRPS A +AASESTP RGLRV GG RGAFPRPSPSR SG V EG SSGGV RG GKTAA SISP LPP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LPLSSLLD PPQ+PG PQ XXXXX SGDVS +VAAG A E EA+AGGG P+ AT GDGSR+T GTGL KAP A+A A REA A +S +AVA LL QVTA+NA DL FGA GRPLRF PPA AGAASSSTFMP LS A ARDES SRLE GE EEGG VVSGPS AA AAPRSFR+ELLRSGRDGQLATP WV+NHTRWIVWKLAAMERRFP HFPGGYLTA RLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYTP+ELGGREG AAA+VEVTDGWYPID ALDGALAHFLRRGKGKI PGTKLAIANA+L A A NPMDPLELLRRRDAGEFPPGAGPRLRLAVNSCRRARWDARLGFFWPRQGRRA E G PGGVEPAALEVPLCTVVPGGGVVSATRV PA
Sbjct: 2338 FDRKGQVG-SGTAFSPPGRAEGAMLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGVVTTPKSVAKRRVFRGGYGGSLHAMKRPRPSPGA-TAASESTPXXXXXXXXXXXXXXXXRGLRVSGGGG-RGAFPRPSPSRLSGGVFEGSSSGGVERGTGKTAAAGRSISPPLPPADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGR--------LPLSSLLDMPPQIPGHPQQQAIWRAGXXXXXATGSGDVSDREVAAGGTKALETEEAAAGGG----PHKHGATFCGDGSRDTGNGTGLGKAPVAAAGATGEVAAVVREALGKQPQGAGSSANAVAVLLGQVTAQNASDLCFGADGRPLRFVPPAPAGAASSSTFMPRLSXXXXXXXATARDESCSRLEAGEGEEGGRGVVSGPSVTAAAEAAPRSFREELLRSGRDGQLATPIWVQNHTRWIVWKLAAMERRFPEHFPGGYLTAGRLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYTPQELGGREGDAAAIVEVTDGWYPIDAALDGALAHFLRRGKGKIAPGTKLAIANAALGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVNPMDPLELLRRRDAGEFPPGAGPRLRLAVNSCRRARWDARLGFFWPRQGRRAEEEGGPGGVEPAALEVPLCTVVPGGGVVSATRVXXXXXXPA 3100
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs.
Match: BRCA-2_helical (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH10_9PHAE) HSP 1 Score: 379 bits (973), Expect = 3.240e-105 Identity = 292/511 (57.14%), Postives = 312/511 (61.06%), Query Frame = 1
Query: 1 AIEGPARGLRASRPPATGGSGFQTGGGRALTVSAEALAKVQHLFQGKDGGXXXXXXXXTMESQAKGFRASRLPTTGARRHQQATPKSGGKPFRPPSAVRKARALHDADGFSGPVVPAPGSRGQAGTSAASLTAASSGVTAGEGVMKTVPPAAGGGTAALRAGVDGDDGSDVAKVSREEQTKAPSLATTSGGRGG------------------DGGGVR---GFVETLTKAVDDDADAGAASAGVDGVGSFTGATTTTPQTSGRQPQTRRRKESTDIQSLEDVGPAVAPGGAAEXXXXXXXXXPSGFITGGGRPVHVSAEALLKAKRLLADASGDDDIESAAGAERGDQEGATAARPGASPVLAQSTTIRASAQGRTILASGTGMPDARQGGNGWQGSAGGDTKPSAVXXXXXXXXXXXX--FSTGSGRRVEVSPEALERARQMFAECEAATPSGSGGRGGDENPPPATGGSDAGGGVGXXXXXXXXXXXVVGXXXXXXXXXGVFSTGRGKL 1464
AIE ARGLRASR PATGGSGFQTG GRAL VSAEALAKVQHLFQG + GXXXXXX MES G RASR P GARRHQQATP+SGGKPFR PSAVRK RA D DG GPV PAPG RGQA TS S T AS+G GEGV+ V PAA G A D GG+ G +TL +AVDDD DAG SAG + GS T ATT PQTSGRQPQT R S D+ S D GPA P GAAE S FITGG RPVHVSAEALLKAKRLLADASGD+ +E+AAG ER DQEGA+AAR GA P +QSTT RA AQG I ASG M DAR G + W G G D KP V F TG+GRRVEVSPEALERARQ+ AEC+AATPSG+G RGGD NPPPA GGS G+G XX XXXXXXXGVFSTGRGKL
Sbjct: 2080 AIESQARGLRASRQPATGGSGFQTGRGRALEVSAEALAKVQHLFQGNEDGXXXXXX--AMESPMTGLRASRPPVAGARRHQQATPRSGGKPFRRPSAVRKPRAQGDTDGIPGPVAPAPGLRGQAATSEGSPTKASAGGAGGEGVIAAVSPAASAGKGRSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGGLAKPGGSADTLAEAVDDD-DAGEESAGENEAGSITDATTA-PQTSGRQPQTMTRS-SADVDSSRDEGPAADPRGAAEAPAPPTAAA-SRFITGGARPVHVSAEALLKAKRLLADASGDE-MEAAAGVEREDQEGASAARRGAPPAFSQSTTKRAGAQGPAIPASGIDMSDARLGVDDWNGHGGRDAKPPVVGRGNGDSGGGSAGGFLTGNGRRVEVSPEALERARQVLAECKAATPSGAGSRGGDGNPPPAIGGSXXXXGIGGSGLGGVVXX--ARGSXXXXXXXGVFSTGRGKL 2581
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z991_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.790e-36 Identity = 111/305 (36.39%), Postives = 152/305 (49.84%), Query Frame = 3
Query: 2880 LLRSGRDGQLATPTWVKNHTRWIVWKLAAMERRFPGHFPGGYLTAERLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYTPEELGGREGGAAAV-----------VEVTDGWYPIDVALDGALAHFLRRGKGKITPGTKLAIANASLEAGAGPIDTKNGTATTNGGGGAANPMDPLELLRRRDAGEFPPGAGPRLRLAVNSCRRARWDARLGFFWPRQGR-RAGEGEPGGVEPAALEVPLCTVVPGGGVVSATRVIVLRRYPALYMSGXXXXXXXXXXXXXXXXXRVLSEAEEE 3758
L G D L + +W+ NH RWI+WKLA+MERRFP G YLT R+ QL RY EL RAK+P ++ +L D +++R M+LCVS+V + + + V +E+TDGWY + LDG L F+RRGK I G+KL ++NA+L GA + +DPL+ + P LRL NS R A WDA+LGF P G+ RA EG L L ++PGGG + +I+ R+YP L++ RVLSEAE+E
Sbjct: 281 LTEHGCDKSLLSDSWISNHYRWIIWKLASMERRFPHVLGGAYLTYPRIITQLVARYEKELRRAKRPAVRMILNRDIASSRLMILCVSQVMR-SRVSNTDSSSGLVSSPSRPQEVIKLELTDGWYSVPAVLDGILTSFVRRGK--IRVGSKLLLSNATLL-------------------GAEDGIDPLDSNYSSSRRDCPVA----LRLVANSTRLANWDAKLGFV-PVVGKIRAQEG-------FLLVRSLSDIMPGGGNLPLMDLIICRQYPKLFLE-------------QGGVNRVLSEAEDE 538
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs.
Match: Uncharacterized (protein n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9P7Q4_LITCT) HSP 1 Score: 138 bits (348), Expect = 4.270e-33 Identity = 93/264 (35.23%), Postives = 131/264 (49.62%), Query Frame = 3
Query: 2889 SGRDGQLATPTWVKNHTRWIVWKLAAMERRFPGHFPGGYLTAERLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYT------PEELGGREGGAAAVVEVTDGWYPIDVALDGALAHFLRRGKGKITPGTKLAIANASLEAGAGPIDTKNGTATTNGGGGAANPMDPLELLRRRDAGEFPPGAGPRLRLAVNSCRRARWDARLGFFWPRQGRRAGEGEPGGVEPAALEVPLCTVVPGGGVVSATRVIVLRRYP 3662
+G D +L + WV NH RWIVWKLAAME FP F G LT ER+ QL+YRY VE+D++++ LK +++ D +AA+ +VLCVS+V + E ++G +AV+EVTDGWY I LD +L L R + + G K+ I A L G A P++ E L L+ A NS R ARW +LG+F +P VPL ++ GG+V +++ R YP
Sbjct: 12 TGVDPKLISSEWVYNHYRWIVWKLAAMEVMFPEQFAGRCLTPERVLLQLKYRYEVEIDKSRRSALKRIMERDDTAAKTLVLCVSKVISWGGNDESESKDPKQG--SAVIEVTDGWYGIKALLDTSLTALLYRRR--LFVGQKIIIHGAELV----------------GSEEACTPLEAPESLM--------------LKFAANSTRPARWYTKLGYF---------------CDPRPFCVPLSSLFAEGGIVGCVDIVIQRIYP 226
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LD43_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.070e-32 Identity = 101/279 (36.20%), Postives = 137/279 (49.10%), Query Frame = 3
Query: 2868 FRDELLRSGRDGQLATPTWVKNHTRWIVWKLAAMERRFPGHFPGGYLTAERLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYTPEELGGREGG--------AAAVVEVTDGWYPIDVALDGALAHFLRRGKGKITPGTKLAIANASLEAGAGPIDTKNGTATTNGGGGAANPMDPLE---LLRRRDAGEFPPGAGPRLRLAVNSCRRARWDARLGFFWPRQGRRAGEGEPGGVEPAALEVPLCTVVPGGGVVSATRVIVLRRYPALY 3671
ELL SG D L T WV NH RWIVWKLAA ER FP GYL R+ QL+ RY E+ ++++ ++ VL D S++R MVLCVS+V L G +A+VE+TDGWYPI LDG L+ + + + I G KLAI NA L G + +DPL+ L + F L++ +N + ARW A+LGF E + ++ L + +PGGG++ VIV+RRYP LY
Sbjct: 168 MHSELLSSGCDSTLLTQKWVANHFRWIVWKLAATERSFPTKL-SGYLCRSRVFEQLKARYTKEILKSERSAVRKVLNRDESSSRLMVLCVSKVLDMPNLELAPDGDGFNVTESKSAIVELTDGWYPIRAVLDGHLSSLVSQNR--ICVGIKLAICNAVLH-------------------GCEDGIDPLDDGYNLSAASSSVF-------LKIHLNGTKLARWSAKLGFC----------------EQSCMKTTLMSAIPGGGLIPCMDVIVVRRYPILY 401
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs.
Match: breast (cancer type 2 susceptibility protein homolog isoform X1 n=2 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9BD7D) HSP 1 Score: 145 bits (366), Expect = 3.310e-31 Identity = 98/273 (35.90%), Postives = 134/273 (49.08%), Query Frame = 3
Query: 2862 RSFRDELLRS-GRDGQLATPTWVKNHTRWIVWKLAAMERRFPGHFPGGYLTAERLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYTPEELGGREGGAAAVVEVTDGWYPIDVALDGALAHFLRRGKGKITPGTKLAIANASLEAGAGPIDTKNGTATTNGGGGAANPMDPLELLRRRDAGEFPPGAGPRLRLAVNSCRRARWDARLGFFWPRQGRRAGEGEPGGVEPAALEVPLCTVVPGGGVVSATRVIVLRRYPALYMS 3677
+ R L S G D + WV NH RWIVWKLA ME+RFP + LT + L QL+YRY E+DRA++ L+ +L+ D +A+R M+LCVS+V + + +E+TDGWY + +D A+A L+R K I GTKL I A L ++ + G DPLE+ L++ N RRA+WDA++GFF G P L+ LC GGGVV V + R YP LY+S
Sbjct: 1844 KEIRRAFLSSPGVDTAIVPEKWVDNHYRWIVWKLACMEQRFPQIYAKKCLTMDNLLFQLKYRYDREIDRAQRSSLRKILESDEAASRRMILCVSKVT--------QSSSTTELELTDGWYSVKSFVDSAMASLLQRKK--IVVGTKLMIQGAEL------LNCEQG-------------CDPLEVRGNIS-----------LKIHSNCTRRAKWDAKMGFF-----------HDSGPIPVRLDSVLC----GGGVVGKLHVFIARVYPVLYLS 2061
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs.
Match: BRCA2 (protein (Fragment) n=1 Tax=Centropus unirufus TaxID=1118519 RepID=A0A7K4ZK23_9AVES) HSP 1 Score: 145 bits (366), Expect = 3.590e-31 Identity = 93/269 (34.57%), Postives = 136/269 (50.56%), Query Frame = 3
Query: 2892 GRDGQLATPTWVKNHTRWIVWKLAAMERRFPGHFPGGYLTAERLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYTPEEL-----GGREGG---AAAVVEVTDGWYPIDVALDGALAHFLRRGKGKITPGTKLAIANASLEAGAGPIDTKNGTATTNGGGGAANPMDPLELLRRRDAGEFPPGAGPRLRLAVNSCRRARWDARLGFFWPRQGRRAGEGEPGGVEPAALEVPLCTVVPGGGVVSATRVIVLRRYPALYM 3674
G D +L T WV NH RWIVWKLAAME FP F LT E + QL+YRY +E+D++K+ +K + + D +A + +VLCVS++ + + G + G AAA++EVTDGWY I LD L FLRR + +T G K+ + A L + ++NG P++ + L L+++ NS RRARWDA+LGF +P +PL ++ GG V V++ R YP ++
Sbjct: 2542 GVDPKLITEAWVYNHYRWIVWKLAAMEVSFPHEFANRCLTPETVLLQLKYRYDLEVDKSKRSAIKKITERDDAAGKTLVLCVSKIISLNAVLSPSSGSKHVGNTKAAAIIEVTDGWYGIRALLDPPLRAFLRRRR--LTVGQKIIVHGAEL------VGSQNG----------CTPLEAPDSLM--------------LKISANSTRRARWDAKLGFHR---------------DPRPFPLPLSSLYSEGGAVGCVDVVIQRTYPVQWV 2763
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs.
Match: BRCA2 (protein (Fragment) n=1 Tax=Turnix velox TaxID=2529409 RepID=A0A7L3L957_9CHAR) HSP 1 Score: 145 bits (366), Expect = 3.600e-31 Identity = 94/269 (34.94%), Postives = 133/269 (49.44%), Query Frame = 3
Query: 2892 GRDGQLATPTWVKNHTRWIVWKLAAMERRFPGHFPGGYLTAERLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYTPEELGGREGG--------AAAVVEVTDGWYPIDVALDGALAHFLRRGKGKITPGTKLAIANASLEAGAGPIDTKNGTATTNGGGGAANPMDPLELLRRRDAGEFPPGAGPRLRLAVNSCRRARWDARLGFFWPRQGRRAGEGEPGGVEPAALEVPLCTVVPGGGVVSATRVIVLRRYPALYM 3674
G D +L T WV NH RWIVWKLAAME FP F LT E + QL+YRY +E+D++K+P L+ + + D +A + +VLC+S+V + + AAA+VEVTDGWY I LD L FL RG+ +T G K+ + A L I ++NG P++ + L L+++ NS R ARWDA+LGF +P +PL ++ GG V V++ R YP +M
Sbjct: 2561 GVDPKLITEAWVYNHYRWIVWKLAAMEVAFPHEFANRCLTPEMVLLQLKYRYDLEIDKSKRPALRKITERDDAAGKTLVLCISKVISLNTVVSPNSSSKNVESKKAAAIVEVTDGWYGIRALLDPPLKAFLHRGR--LTVGQKIIVHGAEL------IGSENG----------CPPLEAPDSLM--------------LKISANSTRCARWDAKLGFHR---------------DPRPFPLPLSSLYSEGGAVGCIDVVIQRTYPIQWM 2782
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs.
Match: Breast (cancer 2 early onset (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YME7_THAPS) HSP 1 Score: 135 bits (341), Expect = 3.710e-31 Identity = 89/266 (33.46%), Postives = 131/266 (49.25%), Query Frame = 3
Query: 2892 GRDGQLATPTWVKNHTRWIVWKLAAMERRFPGHFPGGYLTAERLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYT-----PEELGGREGGAAAVVEVTDGWYPIDVALDGALAHFLRRGKGKITPGTKLAIANASLEAGAGPIDTKNGTATTNGGGGAANPMDPLELLRRRDAGEFPPGAGPRLRLAVNSCRRARWDARLGFFWPRQGRRAGEGEPGGVEPAALEVPLCTVVPGGGVVSATRVIVLRRYPALYM 3674
G D L + W+ NH RWIVWKLAAMERRFP H G YLT ER+ +Q++ RY EL ++P ++ +L D +A+ P++LCVS++ P+ E +E+TDGWY + +D L F+ + +I G+KL I N L + + +G P+D +RD L ++ N+ R ARWDA LGF PR G L L + GGG V A ++V ++YP +++
Sbjct: 1 GCDDSLFSDKWIGNHYRWIVWKLAAMERRFPHHLGGHYLTYERVLKQMKGRYDKELRNFRRPAVRIMLNRDVAASLPVILCVSQILRFKSRPPKGSSSDEIKEEVRLELTDGWYSLPAVVDEILLKFVE--ERRIAVGSKLMICNGQL------VGSDDGV----------EPLDDSYSSSKRDCPLL-------LGISANNSRLARWDATLGFV-PRNNSNLYGGN-------LLVKSLQDIFIGGGTVPAIDLVVCKKYPRMFL 233
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs.
Match: Putative (dna recombinational repair protein brca2 (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X7S3_9HEMI) HSP 1 Score: 142 bits (359), Expect = 6.260e-31 Identity = 92/269 (34.20%), Postives = 131/269 (48.70%), Query Frame = 3
Query: 2880 LLRSGRDGQLATPTWVKNHTRWIVWKLAAMERRFPGHFPGGYLTAERLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYTPEELGGREGGAAAVVEVTDGWYPIDVALDGALAHFLRRGKGKITPGTKLAIANASLEAGAGPIDTKNGTATTNGGGGAANP---MDPLELLRRRDAGEFPPGAGPRLRLAVNSCRRARWDARLGFFWPRQGRRAGEGEPGGVEPAALEVPLCTVVPGGGVVSATRVIVLRRYPALYMS 3677
L G D +L WV NH RWIVWKLA+ME+ FP F G L E + +QL+YRY E+DRA++ K + +GD SA+R + CV+ V + + +E+TDGWY + +D + + KGK+ G+KLAI A + NP DPL++++ RL++ NSCRRARWDA++GF R + L +V+P GG+V T +V R YP L+MS
Sbjct: 152 LASPGVDPKLLPDEWVANHYRWIVWKLASMEKSFPEIFGGRCLNPENMLQQLKYRYDREIDRAQRSAFKKISEGDESASRLFICCVAAVRNNDS---EIDESTYDLELTDGWYSLWATVDQEMVSLIN--KGKVCVGSKLAIMGAE----------------------SINPDQICDPLKVVKEC-----------RLKVCTNSCRRARWDAKMGFVNSR---------------CLSSIQLSSVLPHGGMVGKTSALVARVYPLLHMS 367 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7931.16094.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7931.16094.1 >prot_E_fasciculatus_S2_contig7931.16094.1 ID=prot_E_fasciculatus_S2_contig7931.16094.1|Name=mRNA_E_fasciculatus_S2_contig7931.16094.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=457bp MESQAKGFRASRLPTTGARRHQQATPKSGGKPFRPPSAVRKARALHDADGback to top mRNA from alignment at E_fasciculatus_S2_contig7931:2..6992+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7931.16094.1 ID=mRNA_E_fasciculatus_S2_contig7931.16094.1|Name=mRNA_E_fasciculatus_S2_contig7931.16094.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6991bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7931:2..6992+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7931:2..6992+ >mRNA_E_fasciculatus_S2_contig7931.16094.1 ID=mRNA_E_fasciculatus_S2_contig7931.16094.1|Name=mRNA_E_fasciculatus_S2_contig7931.16094.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1371bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7931:2..6992+ (Ectocarpus fasciculatus EfasUO2)back to top |