mRNA_E_fasciculatus_S2_contig7882.16042.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7882.16042.1
Unique NamemRNA_E_fasciculatus_S2_contig7882.16042.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7882.16042.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW9_ECTSI)

HSP 1 Score: 591 bits (1524), Expect = 1.520e-201
Identity = 288/326 (88.34%), Postives = 305/326 (93.56%), Query Frame = 2 
Query:   95 TSHEIAFLDPKTIKDSQVDEVTHVVSKAFQDYNTSVNTPQEVYEEEFGHPEIGPTVVQSICKSCEGYAVVEDGGAGKIVGVSFVDVHAKGSRVATLGPVAALVPGAGKKAFVAACAYAEELGFSTLILSQIASNSRSFSLYAKLGFETKHTVQYIGGFLEPPSEEGLPPPPAPTGVTLKAMVAEDVEECAELFLEAHGKDCGWDRRADITGCLASGFPFPMLVARDADGKVVGYSTGFFMVGHTIAKSQDIFCYMFREGSKLHKQAGLPCPRFYCPVEFTGLLSWALAQKGLKVFRASLIMVRGHYEHIPWPPAAGHIVAPSTNGY 1072
            T+ E+ F+DPK+I DSQVDEVT VVSKAFQD+NTS+NTP EVYEEEFGHP IGPTV+QSICKS EGYAVVEDGGAGKIVGVSFVDVHAKGS+VATLGPVA+L  GAGKK+FVAAC YAEELGFSTLIL+QIA+NSRSFSLYAKLGFETKHTVQYIGGFLE PSE  LP PPAP+GVTLKAMVA DVEECAELFLEAHGKDCGWDRRADITGCL SGFPFPMLVARDA+GKVVGYSTGFFM+GHT+AKSQDIFCYMFREGSKLHKQAGLPCP+FYCPVEFTGLLSW LAQKGLKVFRASLIM RGHYEH PWP AAGHIVAPST GY
Sbjct:    2 TTQELVFIDPKSINDSQVDEVTQVVSKAFQDFNTSINTPVEVYEEEFGHPAIGPTVIQSICKSYEGYAVVEDGGAGKIVGVSFVDVHAKGSKVATLGPVASLASGAGKKSFVAACDYAEELGFSTLILTQIAANSRSFSLYAKLGFETKHTVQYIGGFLEQPSEGSLPLPPAPSGVTLKAMVAGDVEECAELFLEAHGKDCGWDRRADITGCLGSGFPFPMLVARDANGKVVGYSTGFFMIGHTVAKSQDIFCYMFREGSKLHKQAGLPCPKFYCPVEFTGLLSWCLAQKGLKVFRASLIMARGHYEHTPWPNAAGHIVAPSTTGY 327
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7882.16042.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH6_ECTSI)

HSP 1 Score: 555 bits (1431), Expect = 1.380e-187
Identity = 265/326 (81.29%), Postives = 298/326 (91.41%), Query Frame = 2 
Query:   95 TSHEIAFLDPKTIKDSQVDEVTHVVSKAFQDYNTSVNTPQEVYEEEFGHPEIGPTVVQSICKSCEGYAVVEDGGAGKIVGVSFVDVHAKGSRVATLGPVAALVPGAGKKAFVAACAYAEELGFSTLILSQIASNSRSFSLYAKLGFETKHTVQYIGGFLEPPSEEGLPPPPAPTGVTLKAMVAEDVEECAELFLEAHGKDCGWDRRADITGCLASGFPFPMLVARDADGKVVGYSTGFFMVGHTIAKSQDIFCYMFREGSKLHKQAGLPCPRFYCPVEFTGLLSWALAQKGLKVFRASLIMVRGHYEHIPWPPAAGHIVAPSTNGY 1072
            T+ E+AFLDPKTIKDSQ+DEVTHVVS+AFQD+NTS+  P EVYEEEFGHPE GP ++QSICKS E YAVV DGGAGKIVGVSFVDVHAKGSRVA LGPV+++ PGAGKK+FVAACAYAEELGFSTL+L QIA+NSRSFSLYAKLGFETKHT QY+GGFLEPPSE  L PPPAP+GVTLKAMVA DVEECAE+FLEAHGK CGWDRRADITGCL SG PFPMLVARDADGKVVGY+TGF+++GHT+AKSQDIFC MFRE SKLH+QAGLPCPRF+CPVEFTGLLSWALAQKGL++FRA+++M RGHYEH PW  A G++VAPS +G+
Sbjct:    2 TALELAFLDPKTIKDSQMDEVTHVVSRAFQDFNTSIGAPVEVYEEEFGHPETGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYMGGFLEPPSEGSLSPPPAPSGVTLKAMVAGDVEECAEMFLEAHGKGCGWDRRADITGCLESGAPFPMLVARDADGKVVGYTTGFYLMGHTVAKSQDIFCDMFRESSKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGLRIFRATIVMARGHYEHTPWQDAIGNVVAPSASGH 327
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7882.16042.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB4_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 1.510e-62
Identity = 153/333 (45.95%), Postives = 160/333 (48.05%), Query Frame = 2 
Query:  137 DSQVDEVTHVVSKAFQDYNTSVNTPQEVYEEEFGHPEIGPTVVQ---SICKSC------------------EGYAVVEDGGAGKIVGVSFVDVHAKGSRVATLGPVAALVPGAGKKAFVAACAYAEELGFSTLILSQIASNSRSFSLYAKLGFETKHTVQYIGGFLEPPSEEGLPPPPAPTGVTLKAMVAEDVEECAELFLEAHGKDCGWDRRADITGCLASGFPFPMLVARDADGKVVGYSTGFFMVGHTIAKSQDIFCYMFREGSKLHKQAGLPCPRFYCPVEFTGLLSWALAQKGLKVFRASLIMVRGHYEHIPWPPAAGHIVAPSTNGY 1072
            DSQVDEVT VVSKA QD+NTSVN P EVYEE+FGHP IGPTV+Q   +    C                     A VEDGGAGKIVGVSFVDVHAKGSRVATLGPVA+L  GAGK +FVAACAYAEELGFSTL     A   RS                                                                                          DGKVVGYSTG      TI                          RFYCPVEFTGLLSW LAQKGLKVFRASLIM RGH+EH PWP A GHIVAPST GY
Sbjct:    4 DSQVDEVTQVVSKACQDFNTSVNAPVEVYEEDFGHPAIGPTVIQRAGAFRPPCIRRKLGKIFISSNAPTHPSSSAPVEDGGAGKIVGVSFVDVHAKGSRVATLGPVASLASGAGKNSFVAACAYAEELGFSTL-----AGGPRS------------------------------------------------------------------------------------------DGKVVGYSTG------TI--------------------------RFYCPVEFTGLLSWCLAQKGLKVFRASLIMARGHFEHTPWPNATGHIVAPSTTGY 209
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7882.16042.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH7_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 2.560e-61
Identity = 109/140 (77.86%), Postives = 124/140 (88.57%), Query Frame = 2 
Query:  146 VDEVTHVVSKAFQDYNTSVNTPQEVYEEEFGHPEIGPTVVQSICKSCEGYAVVEDGGAGKIVGVSFVDVHAKGSRVATLGPVAALVPGAGKKAFVAACAYAEELGFSTLILSQIASNSRSFSLYAKLGFETKHTVQYIGG 565
            +DEVTHVVSKAFQD+NTS+  P EVYEEEFGHPE GP ++QSICKS E YAVV DGGAGKIVGVSFVDVHAKGSRVA LGPV+++ PGAGKK+FVAACAYAEELGFSTL+L QIA+NSRSFSLYAKLGFE + +++   G
Sbjct:    1 MDEVTHVVSKAFQDFNTSMGAPVEVYEEEFGHPETGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFEGQASLKVTTG 140
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7882.16042.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2U2_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 4.130e-37
Identity = 61/86 (70.93%), Postives = 74/86 (86.05%), Query Frame = 2 
Query:  815 VGHTIAKSQDIFCYMFREGSKLHKQAGLPCPRFYCPVEFTGLLSWALAQKGLKVFRASLIMVRGHYEHIPWPPAAGHIVAPSTNGY 1072
            +GHT+AKS DI C MFRE SKLH+QAGLPCPRF+C VEFTGLLSWALAQ+GLK+FRA+++M RGHYEH PW    GH++AP+ +GY
Sbjct:    1 MGHTVAKSHDIICDMFRESSKLHQQAGLPCPRFHCRVEFTGLLSWALAQRGLKIFRATILMARGHYEHTPWQDTIGHLMAPTASGY 86
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7882.16042.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T0_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.530e-29
Identity = 65/90 (72.22%), Postives = 75/90 (83.33%), Query Frame = 2 
Query:  152 EVTHVVSKAFQDYNTSVNTPQEVYEEEFGHPEIGPTVVQSICKSCEGYAVVEDGGAGKIVGVSFVDVHAKGSRVATLGPVAALVPGAGKK 421
            EVTHVVSKAFQD+NTS++ P E+YEEEFG PE G  ++QSICKS E YAVV DGG GKIVGV FVDVHAKGS+ A LG V+++ PGAGKK
Sbjct:    3 EVTHVVSKAFQDFNTSIHAPVELYEEEFGCPETGTGMIQSICKSHEAYAVVADGGTGKIVGVPFVDVHAKGSKEACLGAVSSIAPGAGKK 92
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7882.16042.1 vs.
Match: N-acetyltransferase (domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9P0X9_PICSI)

HSP 1 Score: 89.7 bits (221), Expect = 8.430e-16
Identity = 74/238 (31.09%), Postives = 114/238 (47.90%), Query Frame = 2 
Query:  164 VVSKAFQDYNTSVNTPQEVYEEEFGHPEIGPTVVQSICKSCEGYAVVE-DGGAGKIVGVSFVDVHAKGSRVATLGPVAALVP----GAGKKAFVAACAYAEELGFSTLILSQIASNSRSFSLYAKLGFETKHTVQYIGGFLEPPSEEGLPPPPAPTGVTLKAMVAEDVEECAELFLEAHGKDCGWDRRADITGCLASGFPFPMLVARDADGKVVGYSTGFFMVGHTIAKSQDIFCYMF 862
            ++ +AF  +N SV  P  V   ++G+ EI   V+  + +S   Y +   D  +G  +G +F++    G  V  +GPV         GAGK    A    A+    +++ L QIA+N++SFSLYAKLGF+    + Y  G ++     G    P   G  +K M   DV  C+EL    H    G +R  DI   L +      +  +D    +  Y+TGF + GH+IA S+D F  +F
Sbjct:   23 ILHRAFSQFNLSVGIPPHV---DYGNVEIAKKVLHEMLQSPSSYGITAFDNASGLPIGAAFLNFT--GESVQAVGPVFVDPDWNNKGAGKALMNALIERAKATNATSIRLVQIAANTQSFSLYAKLGFQPVECISYFEGSMDENLHSGASFIP---GFKVKMMEESDVHACSEL----HKSVLGHERETDIRELLQTNPGNSWVAVKD--DILQAYTTGFCLEGHSIAISEDAFKTLF 246
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7882.16042.1 vs.
Match: GNAT (family N-acetyltransferase n=1 Tax=Streptomyces sp. 3211 TaxID=1964449 RepID=UPI0009A4F06D)

HSP 1 Score: 84.3 bits (207), Expect = 7.420e-14
Identity = 81/300 (27.00%), Postives = 132/300 (44.00%), Query Frame = 2 
Query:  140 SQVDEVTHVVSKAFQDYNTSVNTPQEVYEEEFGHPEIGPTVVQSICKSCEGYAVVE--DGGAGKIVGVSFVDVHAKGSRVATLGPVAALVP----GAGKKAFVAACAYAEELGFSTLILSQIASNSRSFSLYAKLGFETKHTVQYIGGFLEPPSEEGLPPPPAPTGVTLKAMVAEDVEECAELFLEAHGKDCGWDRRADITGCLASGFPFP-MLVARDADGKVVGYSTGFFMVGHTIAKSQDIFCYMFREGSKLHKQAGLPCPRFYCPVEFTGLLSWALAQKGLKVFRASLIMVRGHYEH 1018
            + V+E++ V   +F  +N SV  P E    EF         VQ       GY      D  +G+I+G +F++ H     VA  GP++        G G+  + A+   A+E+G  ++   Q+ASN +SF LYA++GF  +  +  + GF   PS+    P        ++ M   D+  C  +F   +G    + R  DI    +   P+    V  +AD  +VGY+TG  ++GH    S+D    +F   SKL ++     P  + P              G+KV R   ++ RG Y +
Sbjct:   13 ADVEEMSRVFFHSFNSFNDSVGLPPEWPSLEFCQH-----AVQGFLDH-PGYMAFTALDRLSGRILGSNFLEYH---DSVAAPGPISVAEEFQGVGVGRMLWQASLDAAQEIGKESVQAVQLASNVKSFGLYARMGFIPREQLIALTGF---PSQY---PELEYERFLVRPMEMGDIHACGTIFERING----YSRAHDIALAASGKSPWADPYVVENADKSIVGYTTGLSLLGHMCCNSEDAMQALFLHASKLMQERQKNPPLIHLPGRLYPESLLQFLTVGVKVLRLETLISRGVYNY 293
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7882.16042.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNJ0_EMIHU)

HSP 1 Score: 72.8 bits (177), Expect = 7.840e-10
Identity = 74/294 (25.17%), Postives = 118/294 (40.14%), Query Frame = 2 
Query:  146 VDEVTHVVSKAFQDYNTSVNTPQEVYEEEFGHPEIGPTVVQSICK----------SCEGYAVVEDGGAGKIVGVSFVDVHAKGSRVATLGPVAALVPGAGKKAFVAACAYAEELGFSTLILSQIASNSRSFSLYAKLGFETKHTVQYIGGFLEPPSEEGLPPPPAPTGVTLKAMVAEDVEECAELFLEAHGKDCGWDRRADITGCLASGFPFPMLVARDADGKVVGYSTGFFMVGHTIAKSQDIF--CYMFREGSKLHKQAG---LPCPRFYCPVEFTGLLSWALAQKGLKVFR 982
            +DE   +   AF  +N SV             PE  P  V  + K            + +  V++   G +VG + ++       +   GP+A+  PGAGK                 L++  +   +       +     +  ++Y+G         G     AP G  +K + A DVEEC+ L    H + C   R  DI   +  G P P  VARD  GKVVGY+TG ++ GHT+A S++      + +  +    QA    +P P  + P + +    W LA+ G  + R
Sbjct:    6 LDEAASIAFSAFNAFNESVGLA----------PEFPPREVVDVPKYLYSSGLERPGFDVFVAVDE--EGTVVGANMLEYQDGIGGIGXXGPIASKRPGAGK-----------------LLMQAVMKAAAEHPACPR-----RTCIEYVGS--------GCCTAEAPAGFVVKPLAASDVEECSAL----HEQVCASRRMGDIGSAV--GGPHPNAVARDEAGKVVGYTTGSYLSGHTVALSEEALQALVVAQSAAIAAAQAAGAPIPPPTLFVPHQHSAFARW-LARNGFLLTR 250
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7882.16042.1 vs.
Match: GNAT (family N-acetyltransferase n=2 Tax=Nostoc TaxID=1177 RepID=UPI001F55A25F)

HSP 1 Score: 72.4 bits (176), Expect = 9.720e-10
Identity = 70/266 (26.32%), Postives = 115/266 (43.23%), Query Frame = 2 
Query:  230 EFGHPEIGPTVVQSICKSCEGYAVVEDGGAGKIVGVSFVDVHAKGSRVATLGPV----AALVPGAGKKAFVAACAYAEELGFSTLILSQIASNSRSFSLYAKLGFETKHTVQYIGGFLEPPSEEGLPPPPAPTGVTLKAMVAEDVEECAELFLEAHGKDCGWDRRADITGCLASGFPFPMLVARDADGKVVGYSTGFFMVGHTIAKSQDIFCYMFREGSKLHKQAGLPCPRFYCPVEFTGLLSWALAQKGLKVFRASLIMVRGHYE 1015
            +F   E G  ++  I      Y+VV +   G+++G +F+    +G  +A +GP     AA     G++        A E  ++ + L Q A NSRS SLY KLGF+ +  +            EG P      G +++ M   D+  C +L    HG D    R  ++   +  G    MLV  + DG+V GY++     GH +A++ +    +    +    + G     FY P+    L  W L   GL+V + + +M  G Y 
Sbjct:   84 DFPSAEFGAAMLTEILADPAVYSVVAEASDGRVIGSNFLW---EGDTIAGVGPTTVDPAAQNRSVGRRLMEDVLQRAREKRYAGVRLVQAAHNSRSLSLYTKLGFDVREPLANF---------EGKPLSLTIPGRSVRLMTEADLAVCNQLCDRIHGHD----RAGELKAAIGRGTA--MLV--ECDGRVSGYTSEIGFFGHAVAENNEDLKALIA-AAPASAELG-----FYVPMRNADLFRWCL-NHGLRVTQTATLMSLGLYN 322
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7882.16042.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.520e-20188.34protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.380e-18781.29protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH6... [more]
Uncharacterized1.510e-6245.95protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.560e-6177.86protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.130e-3770.93protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.530e-2972.22protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
N-acetyltransferase8.430e-1631.09domain-containing protein n=1 Tax=Picea sitchensis... [more]
GNAT7.420e-1427.00family N-acetyltransferase n=1 Tax=Streptomyces sp... [more]
Uncharacterized7.840e-1025.17protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID... [more]
GNAT9.720e-1026.32family N-acetyltransferase n=2 Tax=Nostoc TaxID=11... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7882contigE_fasciculatus_S2_contig7882:222..7155 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score595.1
Seed ortholog evalue2e-167
Seed eggNOG ortholog2880.D7FVW9
Model size3169
Hectar predicted targeting categoryother localisation
Exons8
EggNOG OGs2EA42@1,2SGDE@2759
Ec32 ortholog descriptionAcyl-CoA N-acyltransferase
Ec32 orthologEc-01_002430.1
Cds size993
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7882.16042.1prot_E_fasciculatus_S2_contig7882.16042.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7882 304..5061 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842448.6517487-UTR-E_fasciculatus_S2_contig7882:221..3031696842448.6517487-UTR-E_fasciculatus_S2_contig7882:221..303Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7882 222..303 +
1696842448.7646182-UTR-E_fasciculatus_S2_contig7882:5061..71551696842448.7646182-UTR-E_fasciculatus_S2_contig7882:5061..7155Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7882 5062..7155 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842448.6628916-CDS-E_fasciculatus_S2_contig7882:303..3571696842448.6628916-CDS-E_fasciculatus_S2_contig7882:303..357Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7882 304..357 +
1696842448.6724672-CDS-E_fasciculatus_S2_contig7882:1402..15361696842448.6724672-CDS-E_fasciculatus_S2_contig7882:1402..1536Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7882 1403..1536 +
1696842448.6881618-CDS-E_fasciculatus_S2_contig7882:1788..19901696842448.6881618-CDS-E_fasciculatus_S2_contig7882:1788..1990Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7882 1789..1990 +
1696842448.700892-CDS-E_fasciculatus_S2_contig7882:2387..24501696842448.700892-CDS-E_fasciculatus_S2_contig7882:2387..2450Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7882 2388..2450 +
1696842448.712149-CDS-E_fasciculatus_S2_contig7882:3102..33231696842448.712149-CDS-E_fasciculatus_S2_contig7882:3102..3323Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7882 3103..3323 +
1696842448.7234058-CDS-E_fasciculatus_S2_contig7882:3603..36501696842448.7234058-CDS-E_fasciculatus_S2_contig7882:3603..3650Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7882 3604..3650 +
1696842448.738657-CDS-E_fasciculatus_S2_contig7882:4231..43371696842448.738657-CDS-E_fasciculatus_S2_contig7882:4231..4337Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7882 4232..4337 +
1696842448.754153-CDS-E_fasciculatus_S2_contig7882:4895..50611696842448.754153-CDS-E_fasciculatus_S2_contig7882:4895..5061Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7882 4896..5061 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7882.16042.1

>prot_E_fasciculatus_S2_contig7882.16042.1 ID=prot_E_fasciculatus_S2_contig7882.16042.1|Name=mRNA_E_fasciculatus_S2_contig7882.16042.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=331bp
MTSSTSHEIAFLDPKTIKDSQVDEVTHVVSKAFQDYNTSVNTPQEVYEEE
FGHPEIGPTVVQSICKSCEGYAVVEDGGAGKIVGVSFVDVHAKGSRVATL
GPVAALVPGAGKKAFVAACAYAEELGFSTLILSQIASNSRSFSLYAKLGF
ETKHTVQYIGGFLEPPSEEGLPPPPAPTGVTLKAMVAEDVEECAELFLEA
HGKDCGWDRRADITGCLASGFPFPMLVARDADGKVVGYSTGFFMVGHTIA
KSQDIFCYMFREGSKLHKQAGLPCPRFYCPVEFTGLLSWALAQKGLKVFR
ASLIMVRGHYEHIPWPPAAGHIVAPSTNGY*
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mRNA from alignment at E_fasciculatus_S2_contig7882:222..7155+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7882.16042.1 ID=mRNA_E_fasciculatus_S2_contig7882.16042.1|Name=mRNA_E_fasciculatus_S2_contig7882.16042.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6934bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7882:222..7155+ (Ectocarpus fasciculatus EfasUO2)
TTGTTGTCTGAACGGAACTGCAATCAATTCCGCTGATCCTGCTCCCACCC
ATTACATACCAACAACCGCCGGCGCCAAGAAGATGACTTCGAGTACTTCT
CACGAGATCGCGTTCCTGGACCCGAAAACCATCAAGGTGTGTGGAGGCAA
TGCTTGTTCCCACGAGGAGACACGGCCTTCTCGGCCTCCTCGTGTTCACC
GTGTGTCGTTGCATGTGCGTCCTGGTCGCAGCAGGTTGATAAGAAAGTTG
GATCCTTTGCCACGAGACTACAAGCAGTACTGCTGCATCTGATCTACGGA
TGGATATCGTAGTTTCAGATCCAGGGTGAGTGACTTCAGGCAGTAGACAT
GTACATGCGCATGCGCCCCATCTCCGCGATCAGTTGCTGTTGGGAATGGA
AGAGGCGCACCTCTGTTCGACGGAGTATGCACACGAAGTGCTACTGCATC
GCGAGGTTTGCCTGAAGTCGCGAGTGGGTCTGTCCTGGCGTTGCGTGCGC
ACTCGGGTTTCAGCGAGAAAAGCCAGTGGGTCGTTTTTTGGCGCACCTAT
GAGCGGATGCATGTTCGTCCGTCGATCTGGACAGGACACATGCAAACGGT
GTGCAACCAACACAAGCGGTTTTGACGCGCGTCGGTTGGTTGACGTTGTC
TAGAGGTTTTGCGACATTATGCCGACTGCTTTGTGTCCATGATGAGTAGT
TCTTTGTGCTGGTAACCGGAAGGTGGAGCTCGTTTCGTTCCACAAGGAAG
GCCGCGTGCGGCCCCGCCGAGTCAGGGGTCCGCCGCCGAAGAAGGATCCA
AATTAGACGTGTGCCTAGTGGATCCACATTCGTTGGATTTTCCCGCCATC
CGTCACACACACGGCGGTTTAAGTGTAGATTCTAGATGATGAGGAAGGTT
CCCCGGAACCGTAGTTCGCCGTCAAACCCCGCGCATTCTTTCGTTTCGCT
TCGTGTTTCGGTCAAACGTTCGGAATGCAGCCAAGCCACGCTTCGCTTCC
ACCCAATCAATGTTGCGCTTCGCGCAGTGGTCCCGACTGCTGTTATGAAC
TGCAGTTTGTTTGGACACCTGCCGTGCCTCCGTCGGCACGGGTATTTATG
CCAGTCGGATACGCGAATGGAGCATTAAAAAAATCGACTTGGTCGTGATA
TGCTTTCCTTTTTCTGTGTTTGACGAAACAGGACTCTCAGGTGGACGAGG
TGACTCACGTTGTGAGCAAGGCGTTTCAAGACTACAACACCTCCGTCAAC
ACCCCCCAAGAGGTGTACGAAGAGGAGTTCGGGCACCCTGAGATTGGTCC
GACCGTTGTTCAAAGGTCAGTGCCCAAAACAACACCGGCGGACGTGTGGA
CCGATGCCCAACGACAACCCCCAACCGTTTCAACCCCAATCCCTGTGTTC
AGAGCAATCGATGTTCAGTACAAGTCCACTCGCATGCGTCGGAAGCTGGG
AAAAACTCTACATTTCTAGCAACACGGCACCACATCCCTCCTCTTCGACT
CGTGCGCGCCACCCACCCATCCACCTCCCCGCTCCCGCGTTTCCAAAATC
AACAACCGTGTTTCCAGCATCTGCAAGTCATGCGAGGGCTACGCAGTGGT
GGAGGATGGCGGGGCCGGCAAGATCGTGGGCGTTTCCTTCGTCGACGTGC
ACGCCAAGGGTTCGAGGGTGGCCACCCTGGGGCCCGTGGCGGCTTTAGTC
CCCGGCGCCGGCAAGAAGGCGTTCGTGGCCGCTTGTGCTTACGCCGAGGA
GCTCGGCTTCTCTACTCTGGTGAGAACGATGGCAACACAAAGGACGCGTC
TTGGGTGGGCGAGCTGACCTGCAAGGTTTGGCGATTGTCGCCGGTGATTT
CGTGGTGGAGGTTTAGGTTTTGTGGGCTGGAGAGCCCAATCTTTGCGTAC
GCGAGTTTCTTGCCTCTCTCCATCGCTAAGCGAGAGTCGGTGCGTGTGTC
CTAGTCAGCCAGCCTACCCCGCCCTCCTCTCCACTCCTTCGTCGTATTGA
GTATTTCTCACTCATGTGCATGTCAGTGAGCAGGCATTCGTCGATCGGTG
CGTTCCTGTTGGTGAGGCGTGTGCTTCTTCCCCTCTCAAACTTGTCTCGC
TTCCTCTTTGCTCTATTTGTTTTTACACAACCGGTTCTGTCTACCTCCTG
CGCGGTCTGGCCACAGATCCTGTCGCAAATCGCGTCCAACTCGCGCTCGT
TCTCCCTGTACGCCAAGCTCGGATTCGAGGTGAGAAAAAGCGCCTCTCTT
GTTGCTATTTTTCTCTTTGCACCGAACGCAGACGACGTGACTTGCAGGAC
GCTTGGCACTCGGGGCATGGTGTGTCCAGTCGCTATACACAGGGCCGGGT
GTAAGGACGTTCATGTATCCCAATATGCACTCATCGCCCCCCCCCCCCCC
CCCCCCCCCCGGGGCCCCCCCCCCCCCTCCCTCCAACCTACCAGAAAACA
CCCTTCCACCAACCCCACCAAAAAAAAAAAACCAATAAAAAACNNNNNNN
NNCCCCCCCCCCCCCCGGTGACTTGGGGGCCTTTCCCCCTGTTGCTAAAG
GCATGCAAGTACTCGCCTTTCAACACCGACAGGATGAAGTACATACCGAT
AAAGCGTCTCTGAAAGTGACCACGGGTTCGAGAAATGAGGCTTCATTTGC
GCGCTCAACACTAAATACCTCTTCCGCACGCTTCGTCCCTCTGAGTTCAC
GTGTTCCGTCATGCATGGTCTTGCAGACGGAAGGTTTGGGTCGGTCATAT
AACGATTATCATGACGCCCAGCAGTTGCACACACACACCAGCGTGCCCGT
TCATCGACACCTTCCTCCCCATCTCCCGCTGCGATCGCCTTTGTAAACGA
ACAATAACCCTTTCCTTTTCTACCTCGCCAGACAAAGCACACGGTCCAAT
ACATCGGAGGATTCCTGGAGCCGCCGTCTGAGGAGGGCCTGCCGCCCCCC
CCCGCGCCTACCGGGGTAACCCTGAAGGCCATGGTCGCAGAAGATGTCGA
GGAATGCGCGGAGCTGTTTCTCGAGGCACACGGGAAGGACTGCGGCTGGG
ACCGCCGGGCGGATATCACCGGTTGCTTGGCGTCCGGCTTCCCGTTCCCG
ATGTGAGTTGGGTCAGCCGAGCAAGGAGGCGTGAGTAAGGGATGGGGCGC
CCGTGGACGTTTTTTTCATCGCGAGAGTAGACTGGTTTTTTTCCGGGGTT
ATGTGGTCGACCAAGGTGTGTGTGACAATGGAACATTTTCATCTAAAGTG
CTCCGGCAACATGTACTGGTATCAGATTTCCGTGACCATGACTTTGCCCC
CACCCTCTCCGTTTGCTCTTCGGTGCATGACATCATCAATTTTTTCACCG
GCGCACGGTCGGGGGATCGACCGAAAAAACAGGCTGGTGGCCCGAGATGC
AGATGGGAAGGTGGTTGGCTACTCCACAGGTGGGCCATATGTGTGTATGC
TGTGCTGGCGACACCACAGAATGACAACGCATTCGGGCGACCTCCTCTTG
GAAAGCTGTTATTGCAAGTAGCAACGTGAGGGGGCTTCGCTCGAATAGAC
CAGGATGCACGGTGGATACCAAGTACCATAGAATAGAGAAGAACATCGCA
ACCACACCAGCAGAAAGCAGGACACGACAAGAAGAGAGGCCCTCAGGAAA
CCATCAGATCAGCAAGAAACGATGCTAGAATCGGGGCGGGAACGGCAGAT
AGCCACCTCCGAAGACCACAAGCTTCACACACGTAGTACAGAGCCAAGGG
CTACTGCGCATGATGCACGCCTTGCCTCGAGCGGAAGTAGAAAGACCTAG
CATAAGAGCCGTGAACACGCCTTCCACCATCTCTCTACGAAGTTCTTGCA
GCGTGACATACTTGCCCCATCATGCTCTCCCAACACTGTTTTCATCGTTC
CTTGCTGTGCCTTTCCTCTACCGTGCGCGCGTCCGTGGTTGGGGGGCGGT
GTTGGTTTCGGTCTTGCTTCGGGGGATCGACATCTGTTGTGGGTCCGTGA
AACCCGAAAGGTTTCTTTATGGTTGGACATACCATAGCCAAGTCTCAGGA
CATCTTCTGCTACATGTTCCGAGAGGGCTCGAAGCTGCACAAGCAGGCTG
GACTGCCGTGCCCGAGGTAAGATCTCCCGCTCCGCTCATTCCTTGTTGGT
TTGGCTCCATGAAACACTCCGAAAGCCTTCGGAGATCGGTTGCTCAAGGT
CATGCTTCCCATTTGAAACAGCAACGTGTTGATTTCGTGGCACACCGTGC
TTTCTCGGGCTCTCGGCTCCGGTGGTGTGCTTGGCTTGAGCTCGGGGCCA
CATGTACCGACTCCTCTCACGGAGCCCCTTCTCCAATCAGCCTTGTATTC
GGCGTGCCGTGTATTGAGTCATTGAGTCCGAGGGTTGTGCCTCCCGATGT
GTATGCAAACTGGGTGGTGAAAACCTTTCGACTCTTGGTAAGTACTTGTC
GAACTGGCGCGACTCTCAAGGTTGTTTCAGCTATGATTGCGGAAGGAATC
AACCATATTCCCAGGACCCCGATTCGGGCTGTGAACCCCCCGCCCCAAAA
AAAAAAGGAAGACACGAACCGTTCATGACGTTGCGTCTCTCTAGTGTGCT
GATGGATATACGATGAAACATTTTTGTCCATTGATCATGATGTTGTGTGT
GTCCTGCCGCGCGTGTGTTGGCAGGTTCTACTGTCCCGTCGAGTTCACGG
GCCTCCTGTCGTGGGCCCTGGCGCAGAAAGGTCTCAAGGTTTTCCGGGCG
TCGCTCATCATGGTGAGAGGGCACTACGAGCACATCCCGTGGCCTCCCGC
CGCCGGGCACATCGTGGCCCCGAGCACCAACGGATACTGAGAAACCGCAA
CGACCTTCAACCTTCGCAGGCCGACGAAACTAGTACGTCGACCACCTTTA
ACGGGGGGGGGGGTGCCTGTTCACGCTGTGTTTTCTGGCGCCCTGCTGTA
GGGATAGGAATTGATGTGTCATGTTATTCTTGGTGTTGCATGTGTTCTTA
TGAGTGTCGCGGACACACCATGTCTGTCCGATGAAGCCGTACGCCCATCG
CTGTAACATGTTTTCTTTGGAGACAACGGGCTTTTTATGCCACAAGAAGA
GAAGGAAGGGCGTGTCTCTGTGCACGGAGAGGTAGCTGTGTGTCGTCTAG
GTGCAGGGTGGGGTATACAAGTGGCTTACGAATTCTGTGTTAAGTGCGTG
GGTTCGTGCGGGAAAATGTATGCCTCAGGAGGGAAAAATGTTGTGTGAGT
ATAGTGAGTGAGGAGCCGATGTGTTCTTGTTGTGTCATGTAGCCTTCCCC
CCTCCCTCCCTCCCCGATCTTGCGGAGGAGGGCTTGCTTGTTGCTGTCAT
TATCTTCCTTTGTCGTCGTCATGTGTGGCGATGGTGTTGTGTTGATTGTC
GTCTTCCGTAAACAACGTGTCCATCTGTACTATGTAGACTACATGCTGTA
CCGGTCCAACCGACGGGGACGCCTTCGTTCGGTAGTCTAGTCATAGGCCA
ACTATCCGAGAGTTTCTTGCGGCCGAAACTGCGACTGCTCTATCTATGCG
AAGGCTGGTAGGACTTGCAGAGTCACTCAAAGACTCGCGCCCAACTCATC
CGCATCATCATCAAGAATGTTCGGGAAGAACTTGGTTGGTTCGGGGCTTG
TTGGCTTTCCCTGTTGTAGGGGTTGGGATTGCACCATGTCACTCTTCTCT
TGTTTTCCATGTAGTACGTGCCGTGGACTGAAGCCGTACGCCTTTCACCG
CAACTTTTTTGTGGAGGCATTCGATTTTATGCCGGAAAAGGGCAGATCTC
TTGAGCACGTACTACGTGGCAAGCGTGCGCTGGATAGATTGGTGAAGGGT
GGGTGGGGTGTACGCGTGATGGCGTACGAACGTCTGTACTGCGGGCGTTC
GTCCGGGAAAATGTACGCTACAACGGGGAAGGTTGTGGGAGCAAGGAAGA
ACGCGATGAATTATTCTTGTCGGCGTTGTACGTGTCGTGTAGGATGAAAA
ATGATGTATACCCCCATCAAGTACATACAGGATGTCGAACACATTTCACC
CCCTCCCTCCCCGGTCCTGCGGAGAAGGGCGTGCATGTTGCCGTCATTAT
CTTCCTTTGCCGTCCTCATTGATTGGTGGCGGTGGTGTTTTGTTTTTTGT
CCGTCTTCCGCCGTTAAACAACGTGTTATAGCATCGGCCACCCGAAAATT
CGGTGGTCATAGGCCAACTACCCGAAAAATTCTTGCGGCCGAAACTTCGA
CTGCTCTATCGGAAGGTCCGGTAGGATTTGCAGGGCCACGCAAAGTCTCT
TGCGCAACTCATCCGCATCAGCATCAAGAATGTTCTGCAAGGTTGATTGG
CTGGGGCTTGTTGACTTTTTCCCACTGCGCCGTTGACCGCTTGGTACCTC
AGCGGCGGCTAAAACGATTGGCCGAAACAAGAGTGGCTTCATGAAGGTCT
AGAACAATGTCTTGCTTTTAATTCGACGGCAACTCCGTGACCAACTTTTG
TCGTGATCGGCCTCAAAGACCCAATCAATAGAAGAGCATGCCTGGGCGAC
ACCGAGCTACACGTAGTTTTGCCAGAACCTCTGGAGGTAAGTCTGGGCTG
TGTTCATGCTCACACGCCACACTGCACTTTGGGGTGCGGCACTTTCTTCT
CATCTGGTGGAGGAAATTGATCGGTAGCGTGAGACCAGACGTAATTCAAA
CAAACGCGACGCGTGATTGGGGCTGCGAGTGGCAGGGGTGAATTCAAGTC
ACAAACGACACGGAAGATTATATCAAGACAACGCGCGAATTTTGGCTGCT
TACGCCGCCAAGCTGAGTGAAGCGAGTCACCACAGACGGATGGGAGTTGG
CTTTGGGATTGTTGATTTTTTTTGTTGTGCGTCGTTGTGTTGCCAACGAA
GAGAGAGCACTGCTAGATAGATAGAGCTTCACAC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7882:222..7155+

>mRNA_E_fasciculatus_S2_contig7882.16042.1 ID=mRNA_E_fasciculatus_S2_contig7882.16042.1|Name=mRNA_E_fasciculatus_S2_contig7882.16042.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=993bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7882:222..7155+ (Ectocarpus fasciculatus EfasUO2)
ATGACTTCGAGTACTTCTCACGAGATCGCGTTCCTGGACCCGAAAACCAT
CAAGGACTCTCAGGTGGACGAGGTGACTCACGTTGTGAGCAAGGCGTTTC
AAGACTACAACACCTCCGTCAACACCCCCCAAGAGGTGTACGAAGAGGAG
TTCGGGCACCCTGAGATTGGTCCGACCGTTGTTCAAAGCATCTGCAAGTC
ATGCGAGGGCTACGCAGTGGTGGAGGATGGCGGGGCCGGCAAGATCGTGG
GCGTTTCCTTCGTCGACGTGCACGCCAAGGGTTCGAGGGTGGCCACCCTG
GGGCCCGTGGCGGCTTTAGTCCCCGGCGCCGGCAAGAAGGCGTTCGTGGC
CGCTTGTGCTTACGCCGAGGAGCTCGGCTTCTCTACTCTGATCCTGTCGC
AAATCGCGTCCAACTCGCGCTCGTTCTCCCTGTACGCCAAGCTCGGATTC
GAGACAAAGCACACGGTCCAATACATCGGAGGATTCCTGGAGCCGCCGTC
TGAGGAGGGCCTGCCGCCCCCCCCCGCGCCTACCGGGGTAACCCTGAAGG
CCATGGTCGCAGAAGATGTCGAGGAATGCGCGGAGCTGTTTCTCGAGGCA
CACGGGAAGGACTGCGGCTGGGACCGCCGGGCGGATATCACCGGTTGCTT
GGCGTCCGGCTTCCCGTTCCCGATGCTGGTGGCCCGAGATGCAGATGGGA
AGGTGGTTGGCTACTCCACAGGTTTCTTTATGGTTGGACATACCATAGCC
AAGTCTCAGGACATCTTCTGCTACATGTTCCGAGAGGGCTCGAAGCTGCA
CAAGCAGGCTGGACTGCCGTGCCCGAGGTTCTACTGTCCCGTCGAGTTCA
CGGGCCTCCTGTCGTGGGCCCTGGCGCAGAAAGGTCTCAAGGTTTTCCGG
GCGTCGCTCATCATGGTGAGAGGGCACTACGAGCACATCCCGTGGCCTCC
CGCCGCCGGGCACATCGTGGCCCCGAGCACCAACGGATACTGA
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