mRNA_E_fasciculatus_S2_contig7837.16007.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7837.16007.1 vs.
Match: Glutamine (synthetase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FPA6_ECTSI) HSP 1 Score: 301 bits (772), Expect = 3.350e-100 Identity = 140/145 (96.55%), Postives = 144/145 (99.31%), Query Frame = 1
Query: 82 MPNTSFSNHTALSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVILYPQAIYPDPFRAGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLF 516
MPNTSFSNHTALSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVI+YPQA+YPDPFR GDNIMVLCDTYEP+GTPLPTNTRKECAAIMEKAK+LVPWFGIEQEYTLF
Sbjct: 1 MPNTSFSNHTALSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPDGTPLPTNTRKECAAIMEKAKELVPWFGIEQEYTLF 145
BLAST of mRNA_E_fasciculatus_S2_contig7837.16007.1 vs.
Match: Glutamine (synthetase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ88_9STRA) HSP 1 Score: 225 bits (574), Expect = 3.110e-70 Identity = 102/145 (70.34%), Postives = 116/145 (80.00%), Query Frame = 1
Query: 82 MPNTSFSNHTALSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVILYPQAIYPDPFRAGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLF 516
MPN FS HT LSD +L F+ L Q G IM EYIWIGGSGQDLRCKTRT P KEGGY +DLPKWN+DGSSTGQAPG+DSEVI+YPQA+Y DPFR GDNIM LCD Y+P+GTP+ NTR CA ++A+ +PWFGIEQEYTLF
Sbjct: 1 MPNNLFSQHTELSDAILESFKTLDQKGFIMVEYIWIGGSGQDLRCKTRTMPYKEGGYKPSDLPKWNFDGSSTGQAPGDDSEVIIYPQAVYADPFRGGDNIMALCDCYKPDGTPIDNNTRLACAKACQEAEKEIPWFGIEQEYTLF 145
BLAST of mRNA_E_fasciculatus_S2_contig7837.16007.1 vs.
Match: Glutamine (synthetase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2J3_9STRA) HSP 1 Score: 199 bits (506), Expect = 9.700e-60 Identity = 96/145 (66.21%), Postives = 109/145 (75.17%), Query Frame = 1
Query: 82 MPNTSFSNHTALSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVILYPQAIYPDPFRAGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLF 516
M NT FS HT LS+EV F LPQG AEYIWIGG+GQDLRCKTRT K DLP WN+DGSSTGQAPG+DSEV+L PQAI+PDPFR GDNI+V+CD Y+P+ TP+ NTR CA M+K + LVPWFGIEQEYTLF
Sbjct: 1 MSNTLFSMHTQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNN--PDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLF 143
BLAST of mRNA_E_fasciculatus_S2_contig7837.16007.1 vs.
Match: Glutamine (synthetase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXT5_HETAK) HSP 1 Score: 188 bits (478), Expect = 1.210e-55 Identity = 89/146 (60.96%), Postives = 111/146 (76.03%), Query Frame = 1
Query: 79 RMPNTSFSNHTALSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVILYPQAIYPDPFRAGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLF 516
+M N FS T L+ + ++F L Q GKIMAEYIWIGG+G D+R KT+T + + LP WN+DGSSTGQAPGEDSEVI+ P+AI+PDPFR NI+V+CD Y+PNG P+ +NTR +CA IME+AKDL+PWFGIEQEYTLF
Sbjct: 17 KMANPIFSQKTTLNMAIQDKFSTLEQNGKIMAEYIWIGGTGADIRSKTKTLDFVP--TSPSQLPDWNFDGSSTGQAPGEDSEVIIKPKAIFPDPFRRSGNILVMCDCYKPNGEPIFSNTRAKCAEIMERAKDLLPWFGIEQEYTLF 160
BLAST of mRNA_E_fasciculatus_S2_contig7837.16007.1 vs.
Match: Glutamine (synthetase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW55_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.470e-54 Identity = 88/145 (60.69%), Postives = 109/145 (75.17%), Query Frame = 1
Query: 82 MPNTSFSNHTALSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVILYPQAIYPDPFRAGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLF 516
M N F++HT L+ +L+ + KLPQG K AEYIWIGG+G D+R KT+T K + A+LP WNYDGSSTGQAPGEDSEV+L PQAI+PDPFR GDNI+V+CD Y+P+ TP+ NTR I + ++LVPWFGIEQEYTLF
Sbjct: 1 MSNPVFTSHTFLNPTILDRYLKLPQGEKCQAEYIWIGGTGHDIRSKTKTLNKKVS--SPAELPIWNYDGSSTGQAPGEDSEVMLKPQAIFPDPFRGGDNIIVVCDCYKPDMTPIDGNTRAVAEDIFSQKQELVPWFGIEQEYTLF 143
BLAST of mRNA_E_fasciculatus_S2_contig7837.16007.1 vs.
Match: Glutamine (synthetase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RS53_HETAK) HSP 1 Score: 184 bits (468), Expect = 1.010e-53 Identity = 85/134 (63.43%), Postives = 103/134 (76.87%), Query Frame = 1
Query: 115 LSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVILYPQAIYPDPFRAGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLF 516
L +EV + L Q GK+ AEYIWIGGSG+D+RCKTRT +K + +DLPKWNYDGSSTGQAPGEDSEVIL P A++PDP R GDN++V+C+ P+G +PTNTR+ +MEKAKD V WFGIEQEYTLF
Sbjct: 64 LDNEVYKRYMSLDQKGKVQAEYIWIGGSGEDIRCKTRTLNSKPS--SASDLPKWNYDGSSTGQAPGEDSEVILVPVAVFPDPLRGGDNVLVMCEAETPDGVAIPTNTRRFANEMMEKAKDEVCWFGIEQEYTLF 195
BLAST of mRNA_E_fasciculatus_S2_contig7837.16007.1 vs.
Match: Glutamine (synthetase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WIX6_9STRA) HSP 1 Score: 181 bits (458), Expect = 6.860e-53 Identity = 86/134 (64.18%), Postives = 104/134 (77.61%), Query Frame = 1
Query: 115 LSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVILYPQAIYPDPFRAGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLF 516
L V +++ +L GG I AEYIWIGGSGQDLRCKTRT K ++ADLP WN+DGSSTGQAPGEDSEV+L P AI+ DPFR GD+I+VLCD Y+P+ TP+PTNTR + A + + A+ VPWFGIEQEYTLF
Sbjct: 4 LDRAVYDKYLELSTGGYIQAEYIWIGGSGQDLRCKTRTLDKKPA--SIADLPIWNFDGSSTGQAPGEDSEVLLKPAAIFKDPFRGGDHILVLCDCYKPDLTPIPTNTRFDAARVFKAAEAHVPWFGIEQEYTLF 135
BLAST of mRNA_E_fasciculatus_S2_contig7837.16007.1 vs.
Match: Glutamine (synthetase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CP56_EMIHU) HSP 1 Score: 179 bits (454), Expect = 4.360e-52 Identity = 89/134 (66.42%), Postives = 102/134 (76.12%), Query Frame = 1
Query: 139 FRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVILYPQAIYPDPFRAG-DNIMVLCDTYEPN-------GTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLF 516
F +LPQGGKIMAEYIW+GG+G+ LRCKTRT AK+ A ADLP WN+DGSST QAPG+DSEV+L P A+Y DPFR G DNI+VLCD Y+P+ G P+PTNTR EC IM K K PWFGIEQEYTLF
Sbjct: 15 FAELPQGGKIMAEYIWVGGNGE-LRCKTRTLEAKDAKAAPADLPIWNFDGSSTEQAPGDDSEVLLKPCAVYKDPFRPGSDNILVLCDCYKPDPDGPRGLGEPIPTNTRAECEKIMTKIKAAEPWFGIEQEYTLF 147
BLAST of mRNA_E_fasciculatus_S2_contig7837.16007.1 vs.
Match: Glutamine (synthetase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSG6_ECTSI) HSP 1 Score: 178 bits (452), Expect = 1.840e-51 Identity = 84/134 (62.69%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 115 LSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVILYPQAIYPDPFRAGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLF 516
L V++ + LPQG ++ AEY+WIGG+G DLRCKTRT K G AV DLP WNYDGSS GQAPG+DSEV+L P IYPDPFR GDNI+VLC+T P G P+P+NTR + A + A L PWFGIEQEYTLF
Sbjct: 52 LDQGVMDRYMALPQGTRVQAEYVWIGGTGLDLRCKTRTLEEKPG--AVNDLPLWNYDGSSCGQAPGDDSEVMLRPVKIYPDPFRGGDNIIVLCETCLPTGEPIPSNTRAKARASFDAAPGLEPWFGIEQEYTLF 183
BLAST of mRNA_E_fasciculatus_S2_contig7837.16007.1 vs.
Match: Glutamine (synthetase n=1 Tax=Dunaliella viridis TaxID=140095 RepID=H2DRI8_9CHLO) HSP 1 Score: 177 bits (449), Expect = 3.090e-51 Identity = 87/130 (66.92%), Postives = 97/130 (74.62%), Query Frame = 1
Query: 154 QGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVILYPQAIYPDPFRAGDNIMVLCDTYEP-----NGT-----PLPTNTRKECAAIMEKAKDLVPWFGIEQEYTL 513
Q GK+ AEY+WIGGSG DLRCK +T K V DLP WNYDGSSTGQAPG+DSEV L P+A+Y DPFR GDNI+V+CDTYEP +GT PLPTNTR CA +MEKAKD PWFGIEQEYTL
Sbjct: 37 QSGKVCAEYVWIGGSGADLRCKAKTLSKKP--TKVEDLPVWNYDGSSTGQAPGDDSEVYLVPRAMYRDPFRMGDNILVMCDTYEPPRPQKDGTIVPMKPLPTNTRHACAEVMEKAKDQEPWFGIEQEYTL 164 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7837.16007.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7837.16007.1 >prot_E_fasciculatus_S2_contig7837.16007.1 ID=prot_E_fasciculatus_S2_contig7837.16007.1|Name=mRNA_E_fasciculatus_S2_contig7837.16007.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=172bp NHICLHTQDTTPWRTQDTTPLSLSPSRMPNTSFSNHTALSDEVLNEFRKLback to top mRNA from alignment at E_fasciculatus_S2_contig7837:2561..7134+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7837.16007.1 ID=mRNA_E_fasciculatus_S2_contig7837.16007.1|Name=mRNA_E_fasciculatus_S2_contig7837.16007.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4574bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7837:2561..7134+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7837:2561..7134+ >mRNA_E_fasciculatus_S2_contig7837.16007.1 ID=mRNA_E_fasciculatus_S2_contig7837.16007.1|Name=mRNA_E_fasciculatus_S2_contig7837.16007.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=516bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7837:2561..7134+ (Ectocarpus fasciculatus EfasUO2)back to top |