mRNA_E_fasciculatus_S2_contig7825.15995.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7825.15995.1
Unique NamemRNA_E_fasciculatus_S2_contig7825.15995.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7825.15995.1 vs.
Match: COX15 (homolog, cytochrome c oxidase assembly protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P2_ECTSI)

HSP 1 Score: 474 bits (1221), Expect = 5.260e-167
Identity = 237/244 (97.13%), Postives = 238/244 (97.54%), Query Frame = 1 
Query:    1 MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLEDRSQDLAVGKEIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPRAASPSATDAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEVHFFLP 732
            MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLEDRS DLAVGKEIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPR ASPSA DAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEE+  F P
Sbjct:    1 MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLEDRSADLAVGKEIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPRTASPSAADAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEILAFRP 244
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BLAST of mRNA_E_fasciculatus_S2_contig7825.15995.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA4_9PHAE)

HSP 1 Score: 476 bits (1224), Expect = 1.050e-165
Identity = 236/244 (96.72%), Postives = 239/244 (97.95%), Query Frame = 1 
Query:    1 MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLEDRSQDLAVGKEIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPRAASPSATDAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEVHFFLP 732
            MVTVGGITRMTKSGLSMTDWK+QGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGV+YGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLEDRS DLAVGKEIRVSPYRLAAHLATAF TFSLLVHTGFQALDGPRAASPSATDAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEE+  F P
Sbjct:  118 MVTVGGITRMTKSGLSMTDWKIQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVVYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLEDRSADLAVGKEIRVSPYRLAAHLATAFTTFSLLVHTGFQALDGPRAASPSATDAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEILAFRP 361
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7825.15995.1 vs.
Match: COX15-like (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6N7_9STRA)

HSP 1 Score: 300 bits (768), Expect = 2.360e-98
Identity = 157/245 (64.08%), Postives = 186/245 (75.92%), Query Frame = 1 
Query:    1 MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRS--MTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGL-EDRSQDLAVGK--EIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPRAASPSATDAARRLL-DAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEV 717
            MVTVGG+TR+T+SGLSMTDWK+QGS+PP + AEWEAEF+RYK FPE+QQRR   MT+D+FK IF+WEY HRMLGRALGV+YG PLLYF  RG +P HIR R A L  LGG QGLVGWWMVKSGL E+ +  L  G+  ++RVSPYRLA HLA AF TF LLVHTG  AL GP AA+ +     ++LL  AGV+R+ +      +G    AFVTA+SGAFVAGNDAG  YN FPKMT + WLPEE+
Sbjct:    1 MVTVGGMTRLTRSGLSMTDWKLQGSMPPMNAAEWEAEFNRYKQFPEYQQRRQQGMTVDDFKSIFWWEYGHRMLGRALGVVYGAPLLYFAARGALPPHIRARAAALLVLGGTQGLVGWWMVKSGLQEETAAKLGEGEGAQVRVSPYRLATHLAMAFTTFGLLVHTGLDALRGPGAANEALAAFGKQLLAPAGVLRRAT------IGTAALAFVTAMSGAFVAGNDAGHAYNTFPKMTYDRWLPEEI 239
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7825.15995.1 vs.
Match: COX15-like (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA1_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.580e-94
Identity = 156/252 (61.90%), Postives = 181/252 (71.83%), Query Frame = 1 
Query:    1 MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRR--SMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLED----RSQDLAVGK-------EIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPRAASPSATDAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEV 717
            MVTVGG+TR+T+SGLSMTDWK+QGSLPP +EAEWEAEF RYK FPE+QQR+   MTLD+FK+IF+WEY HRMLGRALGV+YG PLLYF  RG +P HIRGR A L ALG AQGLVGWWMVKSGL +    R +    G+       +IRVSPYRLAAHL  AF TF+LLVHTG  AL GP AA        R  +D   +     LR  A+     +FVTA+SGAFVAGNDAGR YN FP+M  + WLP E+
Sbjct:    1 MVTVGGVTRLTRSGLSMTDWKLQGSLPPLNEAEWEAEFARYKQFPEYQQRQHQGMTLDDFKYIFWWEYGHRMLGRALGVVYGAPLLYFAARGALPRHIRGRAAALLALGAAQGLVGWWMVKSGLHEGTLARLRGAGGGEGEGGERVQIRVSPYRLAAHLGMAFTTFALLVHTGLDALHGPGAARQ-----VRTCVDVLSLPLARVLRGAALTTAALSFVTALSGAFVAGNDAGRAYNTFPRMLPDRWLPVEI 247
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BLAST of mRNA_E_fasciculatus_S2_contig7825.15995.1 vs.
Match: Cytochrome (c oxidase assembly protein cox15-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5C0_9STRA)

HSP 1 Score: 277 bits (708), Expect = 5.760e-88
Identity = 151/250 (60.40%), Postives = 175/250 (70.00%), Query Frame = 1 
Query:    1 MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLEDRSQDLAVGKEIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPRAASPSATDAARRLLDAGVMRQGSN---------LRVMAMGVCGAAF--VTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEV 717
            MVTVGGITR+TKSGLSMTDW+VQGSLPP +E EW+AEF RYK FPE+QQR+SMTLDEFK IF+WE+ HRM+GR +G+ YG+P  YF +RGRIP  +  R+A LFALGG QGL+GWWMVKSGLE    D    KEIRVSPYRL AHL  AF TFSLL+ TG      P  A  +AT A +  L A     G           LRV  +G+  A    VT +SGAFVAGNDAGR YN FPKM E+ W+P EV
Sbjct:   77 MVTVGGITRLTKSGLSMTDWRVQGSLPPLNETEWQAEFARYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGLPFAYFAVRGRIPRSLYPRLATLFALGGGQGLIGWWMVKSGLE---MDPQQRKEIRVSPYRLTAHLGMAFTTFSLLIWTGMDLFHPPEHAVRAAT-ALKTQLAAAARTGGPQASQELLTRVLRVRHLGIASAGLLGVTILSGAFVAGNDAGRAYNTFPKMGEDFWIPPEV 322
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7825.15995.1 vs.
Match: Hypothetical (protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EG07_TRICV)

HSP 1 Score: 258 bits (659), Expect = 1.260e-81
Identity = 140/230 (60.87%), Postives = 160/230 (69.57%), Query Frame = 1 
Query:   13 GGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGL-EDRSQDLAVGKEIRVSPYRLAAHLATAFATFSLLVHTGFQAL----DGPRAASPSATDAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKM 687
            GG+TR+TKSGLSMTDWK  GSLPP +  EWEAEFDRYK FPEWQQR+SM +++FK+I+FWE+ HRMLGRA+GV +  P  YF LRGRIPA    R+  LF +GG QGLVGWWMVKSGL E+R  D    KEIRVSPYRLAAHL  AFAT+S LV TG        D P          A R L +  MR    LR  A+GV   AF+TA+SGAFVAGNDAG  YN FP M
Sbjct:    1 GGVTRLTKSGLSMTDWKPLGSLPPMTPEEWEAEFDRYKTFPEWQQRKSMDVEDFKYIYFWEWGHRMLGRAVGVAFAAPWAYFALRGRIPAGYGPRMGLLFTMGGTQGLVGWWMVKSGLGENRRGDR---KEIRVSPYRLAAHLGMAFATYSTLVWTGMGISHVPNDTPGKDGTVRLREAARSLSSAAMRHARKLRTGAVGVTSVAFLTAISGAFVAGNDAGNAYNTFPLM 227
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7825.15995.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDV2_9STRA)

HSP 1 Score: 258 bits (659), Expect = 2.550e-81
Identity = 133/240 (55.42%), Postives = 170/240 (70.83%), Query Frame = 1 
Query:    1 MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLEDRSQDLAV---GKEIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPRAASPSATDAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPE 711
            MVT+GG+TR+TKSGLSMTDWKVQGSLPP +  +W  EF+RYK FPEWQQR+SMTLDEFK+IF+WE+ HRM GR +GV +  PL+YF  RGRI   +RGR+A LFA+GG+QGLVGWWMV+SGL ++          +E+RVSPYRLA+HL  AF+ +SLL++T F  L       P AT  +   +   +  +   LR  A G  G  FVTA+SGAFVAGNDAG  +N +P M +  +LP+
Sbjct:  100 MVTIGGLTRLTKSGLSMTDWKVQGSLPPMTHDDWMVEFERYKLFPEWQQRKSMTLDEFKYIFYWEWGHRMFGRVVGVAFTGPLIYFAARGRITPQLRGRMALLFAMGGSQGLVGWWMVRSGLNEKDGGWVKEGQSREVRVSPYRLASHLCMAFSIYSLLLYTAFDVL------YPKATQLSLASVPPKIAAKLPALRASAAGTAGGVFVTAMSGAFVAGNDAGCAFNTWPDM-DGQFLPD 332
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7825.15995.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMJ4_9STRA)

HSP 1 Score: 257 bits (657), Expect = 2.440e-80
Identity = 134/239 (56.07%), Postives = 166/239 (69.46%), Query Frame = 1 
Query:    1 MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLEDRSQDLAVGKEIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPRAASPSATDAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEV 717
            MV VGG+TR+TKSGLSMTDWK  G +PP +  EW  EF+RYK FPEWQQR+SMTLDEFK+IF+WEY HRMLGR +GV +GVPL YF  RGR+P HI+ +V  LF LG  QG +GWWMV+SGL+    D    KEIRVSPYRLA HL  AF T++LL+ T    L  PR  +    DA  + L    + Q S +R  ++      F TA+SGAFVAGNDAGR +N FPKM ++ W+P+ +
Sbjct:   88 MVAVGGLTRLTKSGLSMTDWKPLGRMPPITHPEWLEEFERYKTFPEWQQRQSMTLDEFKYIFWWEYGHRMLGRCVGVAFGVPLAYFWARGRLPPHIKSKVLALFGLGATQGAIGWWMVQSGLD---MDPKQRKEIRVSPYRLATHLGMAFTTYTLLLWTAMDVLY-PRERAMRHLDAIPKQL----LPQVSRVRGASVATAAIVFTTAMSGAFVAGNDAGRAFNTFPKM-DDQWVPDGI 317
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7825.15995.1 vs.
Match: Cytochrome (c oxidase assembly protein subunit 15 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJP2_FISSO)

HSP 1 Score: 255 bits (652), Expect = 2.500e-80
Identity = 136/245 (55.51%), Postives = 171/245 (69.80%), Query Frame = 1 
Query:    1 MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGL-EDRSQDLAVGKEIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPRAASPSATDAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEVHFFLP 732
            M+ VGG+TR+T+SGLSMTDW   GSLPP  + EWEAEF RYK FPEWQQR+SMT++EF++I++WEY HRMLGR +GV++  P LYF LRG+IPA  +GR+A L  +GG QGLVGWWMVKSGL +DR  D     +IRV P RLA HL+ A AT+  L+ TGF  L  P   +  + D A +L  A  +R  S L + A+ + G   VT VSGA VAGNDAGR YN FPKM +  W+P E+   +P
Sbjct:   38 MIHVGGVTRLTQSGLSMTDWSPLGSLPPIGKDEWEAEFARYKQFPEWQQRKSMTMEEFQYIYYWEYGHRMLGRCVGVLFCGPWLYFSLRGKIPAGYQGRMALLATMGGTQGLVGWWMVKSGLGDDRRGDR---NQIRVKPIRLATHLSVAVATYGALLWTGFSVLSLPYNNTLQSLDLASQLPQA--LRHSSKLHIAALAMTGLTAVTIVSGALVAGNDAGRAYNTFPKM-DGHWIPPEIWERVP 276
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7825.15995.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2E0_AURAN)

HSP 1 Score: 249 bits (636), Expect = 1.670e-78
Identity = 127/244 (52.05%), Postives = 165/244 (67.62%), Query Frame = 1 
Query:    1 MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLEDRSQDLAVGKEIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPRAASPSATDAARRLLDAGVMRQGSNLRVMAMGVCGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEVHFFLP 732
            MV+VGG+TR+T+SGLSMTDWK+QG LPP ++ EW+ EF+RYK FPEWQQR+SMT+++FK I+FWEY HRMLGR +GV +G PL YF  RGR+   ++ R+ GL  LGG QGLVGWWMV+SGL+ +       +++RVSPYRLA HL+ AFA+++ LV  G + L G RAA      A             + L  +A    G  FVTA+SGAFVAGNDAG  YN +P M ++  + E   F  P
Sbjct:   17 MVSVGGLTRLTRSGLSMTDWKIQGGLPPQTDDEWQREFERYKRFPEWQQRQSMTVEDFKFIYFWEYGHRMLGRVVGVAFGAPLAYFWSRGRLTPWLKPRLLGLLGLGGTQGLVGWWMVRSGLDTQLLPEKQRQDVRVSPYRLATHLSLAFASYTGLVWCGLEVLSGGRAARSLVARA-----------HAARLAPVAAAAAGLTFVTALSGAFVAGNDAGCAYNVWPYMIDDRDVGEGASFAPP 249
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7825.15995.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
COX155.260e-16797.13homolog, cytochrome c oxidase assembly protein n=1... [more]
Uncharacterized1.050e-16596.72protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
COX15-like2.360e-9864.08protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
COX15-like1.580e-9461.90protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Cytochrome5.760e-8860.40c oxidase assembly protein cox15-like protein n=2 ... [more]
Hypothetical1.260e-8160.87protein n=2 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Hypothetical2.550e-8155.42protein (Fragment) n=1 Tax=Florenciella parvula Ta... [more]
Hypothetical2.440e-8056.07protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Cytochrome2.500e-8055.51c oxidase assembly protein subunit 15 n=2 Tax=Fist... [more]
Uncharacterized1.670e-7852.05protein (Fragment) n=1 Tax=Aureococcus anophageffe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7825contigE_fasciculatus_S2_contig7825:4269..6995 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score479.2
Seed ortholog evalue1.2e-132
Seed eggNOG ortholog2880.D7G2P2
Preferred nameCOX15
Model size732
KEGG rclassRC00769
KEGG koko:K02259
KEGG TC3.D.4.4
KEGG ReactionR07412
KEGG Pathwayko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714
KEGG ModuleM00154
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004129,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006784,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009058,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016226,GO:0016491,GO:0016651,GO:0016653,GO:0016675,GO:0016676,GO:0018130,GO:0019438,GO:0019866,GO:0022607,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031090,GO:0031163,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031975,GO:0032592,GO:0033013,GO:0033014,GO:0034220,GO:0034641,GO:0042168,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044571,GO:0045333,GO:0046148,GO:0046160,GO:0046483,GO:0048037,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051536,GO:0051537,GO:0051540,GO:0055085,GO:0055114,GO:0071704,GO:0071840,GO:0098573,GO:0098655,GO:0098660,GO:0098662,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
Exons5
EggNOG free text desc.Cytochrome C oxidase assembly protein
EggNOG OGsCOG1612@1,KOG2725@2759
Ec32 ortholog descriptionCOX15 homolog, cytochrome c oxidase assembly protein
Ec32 orthologEc-11_002950.1
Cds size732
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842444.2553477-CDS-E_fasciculatus_S2_contig7825:4268..43611696842444.2553477-CDS-E_fasciculatus_S2_contig7825:4268..4361Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7825 4269..4361 +
1696842444.2701638-CDS-E_fasciculatus_S2_contig7825:5043..51451696842444.2701638-CDS-E_fasciculatus_S2_contig7825:5043..5145Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7825 5044..5145 +
1696842444.281044-CDS-E_fasciculatus_S2_contig7825:5436..56101696842444.281044-CDS-E_fasciculatus_S2_contig7825:5436..5610Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7825 5437..5610 +
1696842444.2921438-CDS-E_fasciculatus_S2_contig7825:6146..62631696842444.2921438-CDS-E_fasciculatus_S2_contig7825:6146..6263Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7825 6147..6263 +
1696842444.309096-CDS-E_fasciculatus_S2_contig7825:6749..69951696842444.309096-CDS-E_fasciculatus_S2_contig7825:6749..6995Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7825 6750..6995 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7825.15995.1prot_E_fasciculatus_S2_contig7825.15995.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7825 4269..6995 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7825.15995.1

>prot_E_fasciculatus_S2_contig7825.15995.1 ID=prot_E_fasciculatus_S2_contig7825.15995.1|Name=mRNA_E_fasciculatus_S2_contig7825.15995.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=244bp
MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQR
RSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRV
AGLFALGGAQGLVGWWMVKSGLEDRSQDLAVGKEIRVSPYRLAAHLATAF
ATFSLLVHTGFQALDGPRAASPSATDAARRLLDAGVMRQGSNLRVMAMGV
CGAAFVTAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEVHFFLP
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mRNA from alignment at E_fasciculatus_S2_contig7825:4269..6995+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7825.15995.1 ID=mRNA_E_fasciculatus_S2_contig7825.15995.1|Name=mRNA_E_fasciculatus_S2_contig7825.15995.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2727bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7825:4269..6995+ (Ectocarpus fasciculatus EfasUO2)
ATGGTGACCGTCGGTGGCATCACGCGGATGACCAAGTCGGGGCTGAGCAT
GACGGACTGGAAGGTGCAGGGCTCGCTTCCGCCATCCTCCGAGGTTAGTC
AGCGGTGGCTTCTCCGCTGCGTGCGGGTGGTGCAAGTCAGCGTGTGTTGT
TGAGGCTGCAGCATCCCGCCGCTGCTGCTTGGGTGCGCGGATTCGCCTGC
TGAGGTACATGTATACCCATGTTTAGTCTTTAACCTGCCTGCCTCAGTTC
TGCTGATCGAGACCTACCAAGAAGGAGATAGTGTTTGCCACGATAGCACA
ACGGCCTCTGTCGAAACTTTTCCACTAGTGGCACCAGTGTTTTCTGTTTG
GCAAAGAGGTGATGAGGCCCGCTCCAAGTAAATTACACAGCAGTCGCCCC
CTTACCCCCCCCCCCCAGCCCCGGCAACAGTAGTCGCCCGCCGGGAGATC
GCGCCCATGCAATCGCTTCCAAATCCTTTGAAAGAGAGACACGCACACGA
GCACAGAGATAGTATTTTTCCGTTTCGTCGGCCGACGCGGTAAAGCGATG
TACTGTAGACTACCCTCGGCGTTGCGATGCAACAGATAGTCGCACAGCGG
GAAACTTGTTGATTGATTGATCAGTCGGTTAGCGCGGTCGATCTTGGTTG
TGTTTGAAAAAAATACGCCGCGACCCCACGAGGCACTTACCGCTTTGTAG
ATCTCTCGAGCGGCGTATAGTGTTCGATTCAATGTTCTCGTCGGATTGTA
TGTGTGTCTTGGCTCTTTTGTGAAGGCGGAGTGGGAGGCGGAGTTCGACC
GGTACAAGGCGTTTCCGGAGTGGCAGCAGCGCCGCAGCATGACGCTGGAC
GAGTTCAAGCACATCTTCTTCTGGGAGGTAGGCTGGCGTGTACACATGGT
GGTGTTTCTCAAGCATCGTGCGTGAGGCGCGACTGGGAGAGGAAAACATC
ACGAGAAAAAAATGCTTCTTGTGCGTCATCAAAGAGCCGATGTCTTTTCA
GTGTTACTCGAGAAGTGGCGAAAAGCCGAAACTAGACCCTTCCGGCGGCC
GTTCCGTTCCCCTGACGCCATTCCTTTATCCTCAACCGCCAACTCGAGAT
AAATCCCGTCTCGCTGGTGTCCCAACCCGCTATCCTTCGTGGCGCTCCTC
CTGGATGACAACACACAGTACGCCCACAGGATGCTAGGGCGCGCGCTTGG
CGTGATCTACGGTGTGCCGCTGCTGTACTTCGGCCTCCGCGGAAGAATCC
CCGCGCACATCCGCGGGCGAGTGGCCGGGCTGTTTGCCCTCGGCGGCGCG
CAAGGCCTGGTCGGGTGGTGGATGGTGAAGAGCGGCCTCGAGGTAGACTA
CTAGCTGTGGCGTTCTCGGCAATGGAAGTGGTAGCAGTGGGGGACGAATT
GGCCTGTCTAGCTGTTGGTGTGCGCTCCCGGGAATGGATGACCGGCTGGC
TTGTCTGTTTGGATGGCTGACGAGGTTGGTTTAGTGGTGAGATTCCTTGG
GGTTTTGCTGTTATGGTGGCATTGTTTCCCCTTCAGCAGGTGGGTACGCC
TACGACCCCCGGATCCTACCGCCCCACGGTCGCCCATGCAGTGGGGGCCA
TGCAACCTACAAAGCTTCGTCTCTTCACGTTCTCTGGCTAGTTCTCCACC
GACTGCTTCGTCTCCGCGACTGCCCCCCCCCCCCGGGCCTTCTCTCCCTC
CTTGTGGCGCAGACGATTCTCGAGCTCCTTCCGCGTCTGACCCCTCTGCC
GTCCATTTCCGTTTCGCGGGCCACGGTTCCGCGTTCCGTCTGCATGCCCA
TTTACGGTTCATTGCTCTTTTTTGCTCCGCCTTCGGACGCTTTCGCGCGT
TTCGGGTTTGGTTGCGGCGCGTTCCCAGGACCGGTCCCAGGACCTTGCCG
TGGGGAAGGAGATTCGAGTGAGCCCCTACCGGCTGGCGGCACACCTGGCC
ACCGCCTTCGCCACGTTTTCGCTGCTCGTGCACACCGGTTTTCAGGTGGG
GTTGACTGCAGGCTCGATACAATGGCATATCTGTGGTAATGTGTAAGGGC
GGTGACTTCCGGTTGGCTGTATTGCTGGTGTTGTGTTTGGCGGAACGCAA
GCGTGTCAATGTTTGGCTGGGCGTCGCCCGTCACCTGTCTGTGGCGACGT
GCATCAACGTGTCGCACGGTTTTGGCCTTTGTGTACCGTGCTGCTGTATG
CTGCGGACTGCCGTCGGGGGGCAGCATACGGCTGCCTGAAGGCGTCCCGT
ACAGTCGCGGAAAACGTCCCGTGGTCTGTCGACACTGATTTTTCGAACGA
TGAGAAGTACAATCATTGCCACCATGTCGCCTAACCAACCTTACAAAAGC
CTTGGATGGTGGGTTGTCCCTTCCCACTCTCAGACCTTCATCGTTCCCCA
TCCTCTCCTAAACGTGGAACCACGTCTCACGCCCGCGTCGTCCCTGTCTC
TTGCGTTGCACGCCACCGCCACAAAGAATAGGCCCTCGATGGGCCCCGCG
CGGCCTCCCCTTCCGCCACGGACGCAGCCCGCCGTCTCCTCGACGCCGGG
GTGATGCGGCAGGGGTCCAACCTCCGGGTGATGGCCATGGGCGTGTGCGG
GGCCGCCTTCGTGACGGCCGTGTCCGGGGCGTTCGTGGCCGGCAACGACG
CCGGCCGGTGCTACAACTGCTTCCCCAAGATGACGGAGGAGGACTGGCTG
CCGGAAGAGGTGCATTTTTTTCTTCCT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7825:4269..6995+

>mRNA_E_fasciculatus_S2_contig7825.15995.1 ID=mRNA_E_fasciculatus_S2_contig7825.15995.1|Name=mRNA_E_fasciculatus_S2_contig7825.15995.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=732bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7825:4269..6995+ (Ectocarpus fasciculatus EfasUO2)
ATGGTGACCGTCGGTGGCATCACGCGGATGACCAAGTCGGGGCTGAGCAT
GACGGACTGGAAGGTGCAGGGCTCGCTTCCGCCATCCTCCGAGGCGGAGT
GGGAGGCGGAGTTCGACCGGTACAAGGCGTTTCCGGAGTGGCAGCAGCGC
CGCAGCATGACGCTGGACGAGTTCAAGCACATCTTCTTCTGGGAGTACGC
CCACAGGATGCTAGGGCGCGCGCTTGGCGTGATCTACGGTGTGCCGCTGC
TGTACTTCGGCCTCCGCGGAAGAATCCCCGCGCACATCCGCGGGCGAGTG
GCCGGGCTGTTTGCCCTCGGCGGCGCGCAAGGCCTGGTCGGGTGGTGGAT
GGTGAAGAGCGGCCTCGAGGACCGGTCCCAGGACCTTGCCGTGGGGAAGG
AGATTCGAGTGAGCCCCTACCGGCTGGCGGCACACCTGGCCACCGCCTTC
GCCACGTTTTCGCTGCTCGTGCACACCGGTTTTCAGGCCCTCGATGGGCC
CCGCGCGGCCTCCCCTTCCGCCACGGACGCAGCCCGCCGTCTCCTCGACG
CCGGGGTGATGCGGCAGGGGTCCAACCTCCGGGTGATGGCCATGGGCGTG
TGCGGGGCCGCCTTCGTGACGGCCGTGTCCGGGGCGTTCGTGGCCGGCAA
CGACGCCGGCCGGTGCTACAACTGCTTCCCCAAGATGACGGAGGAGGACT
GGCTGCCGGAAGAGGTGCATTTTTTTCTTCCT
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