mRNA_E_fasciculatus_S2_contig782.15989.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig782.15989.1 vs.
Match: CBFD_NFYB_HMF (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI34_ECTSI) HSP 1 Score: 238 bits (608), Expect = 3.640e-77 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 1
Query: 94 MAEHAGGGDDDIEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDRNNANNMMDT 456
MAEH GGGDDD+EELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDRN ANNMMDT
Sbjct: 1 MAEHTGGGDDDVEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDRN-ANNMMDT 120
BLAST of mRNA_E_fasciculatus_S2_contig782.15989.1 vs.
Match: Nuclear (transcription factor Y subunit B4 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU51_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.910e-49 Identity = 82/112 (73.21%), Postives = 98/112 (87.50%), Query Frame = 1
Query: 94 MAEHAGGGDDDIEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDR 429
MA+ GGD EELREQDRFLPIANISR++KK LP AK+AKDAKET QECVSEFIC+IT++ASDKCQ EKRKTI+GEDI+ +M+TLGFD Y+EPLK+YLAKYR +VKG++
Sbjct: 1 MADEWKGGD--AEELREQDRFLPIANISRIMKKSLPDAAKIAKDAKETVQECVSEFICFITSEASDKCQQEKRKTINGEDILWAMSTLGFDKYVEPLKLYLAKYRESVKGEK 110
BLAST of mRNA_E_fasciculatus_S2_contig782.15989.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EHZ1_TRICV) HSP 1 Score: 165 bits (418), Expect = 6.460e-49 Identity = 76/111 (68.47%), Postives = 97/111 (87.39%), Query Frame = 1
Query: 97 AEHAGGGDDDIEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDR 429
A HAGG D+ EE+REQDR+LPIANI+R++K LP NAK+AKD+KET QECVSEFI +IT++ASDKC EKRKTI+G+D++ +M+TLGFD Y+EPLK+YLAKYR AV+GD+
Sbjct: 8 APHAGGPGDEYEEIREQDRYLPIANIARIMKNTLPDNAKIAKDSKETVQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLAKYREAVRGDK 118
BLAST of mRNA_E_fasciculatus_S2_contig782.15989.1 vs.
Match: CBFD_NFYB_HMF (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5I3_9PHAE) HSP 1 Score: 162 bits (410), Expect = 1.350e-47 Identity = 79/118 (66.95%), Postives = 99/118 (83.90%), Query Frame = 1
Query: 124 DIEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVK-------GDRNNANNMMDT 456
D EELREQDRFLPIANISR++KK LP NAK+AKDAKET QECVSEFIC+IT++ASDKC+ EKRKTI+GED++ +M+TLGFD Y++PLK+YL+KYR +VK G R++A+ M T
Sbjct: 8 DTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLSKYRESVKLEKPDRKGKRDDASEAMAT 125
BLAST of mRNA_E_fasciculatus_S2_contig782.15989.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGW8_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.760e-47 Identity = 77/123 (62.60%), Postives = 100/123 (81.30%), Query Frame = 1
Query: 61 PVPSTIYLRRAMAEHAGGGDDDIEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDR 429
PV S + A+A+ DD EE+REQDR+LPIANI+R++K LP NAK+AKD+KET QECVSEFI +IT++ASDKC EKRKTI+G+D++ +M+TLGFD Y+EPLK+YLAKYR AV+GD+
Sbjct: 34 PVTSMMSAAAAVADSKNPPGDDYEEIREQDRYLPIANIARIMKNTLPDNAKIAKDSKETVQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLAKYREAVRGDK 156
BLAST of mRNA_E_fasciculatus_S2_contig782.15989.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U1F424_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.420e-47 Identity = 75/112 (66.96%), Postives = 95/112 (84.82%), Query Frame = 1
Query: 94 MAEHAGGGDDDIEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDR 429
M A G DD EE+REQDRFLPIANI+R++K LP NAK+AKD+KET QECVSEFI +IT++ASDKC EKRKTI+G+D++ +M+TLGFD Y+EPLK+YLAKYR AV+G++
Sbjct: 1 MEGAAATGGDDYEEIREQDRFLPIANIARIMKLTLPENAKIAKDSKETLQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKIYLAKYREAVRGEK 112
BLAST of mRNA_E_fasciculatus_S2_contig782.15989.1 vs.
Match: CBFD_NFYB_HMF (domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6VZY0_MARPO) HSP 1 Score: 162 bits (410), Expect = 4.360e-47 Identity = 78/114 (68.42%), Postives = 99/114 (86.84%), Query Frame = 1
Query: 103 HAGGGDDDIEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDRNNANN 444
+AGGGD D +REQDRFLPIANISR++KK LP NAK+AKDAKET QECVSEFI +IT++ASDKCQ EKRKTI+G+D++ +M+TLGF+DY+EPLKVYL KYR ++GD+ ++ N
Sbjct: 20 NAGGGDRDNSNVREQDRFLPIANISRIMKKALPVNAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKVYLHKYRE-MEGDKGSSIN 132
BLAST of mRNA_E_fasciculatus_S2_contig782.15989.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKV9_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.160e-46 Identity = 76/123 (61.79%), Postives = 99/123 (80.49%), Query Frame = 1
Query: 61 PVPSTIYLRRAMAEHAGGGDDDIEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDR 429
PVP A+A G +D+ EE+REQDR+LPIANI+R++K LP NAK+AKD+KET QECVSEFI +IT++ASDKC EKRKTI+G+D++ +M+TLGFD Y+EPLK+YL KYR AV+GD+
Sbjct: 28 PVPG------AVATAGNGPNDEYEEIREQDRYLPIANIARIMKNTLPENAKIAKDSKETVQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLGKYREAVRGDK 144
BLAST of mRNA_E_fasciculatus_S2_contig782.15989.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SNW2_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.950e-46 Identity = 73/109 (66.97%), Postives = 96/109 (88.07%), Query Frame = 1
Query: 103 HAGGGDDDIEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDR 429
HAG + +E+REQDRFLPIAN+SR++K+ LP NAK+AKDAKET QECVSEFI +IT++ASDKCQ EKRKTI+G+D++ +MNTLGFD Y++PLKVYL+KYR ++KG++
Sbjct: 8 HAGIEEGPDDEMREQDRFLPIANVSRIMKRSLPQNAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMNTLGFDKYMDPLKVYLSKYRESIKGEK 116
BLAST of mRNA_E_fasciculatus_S2_contig782.15989.1 vs.
Match: Nuclear (transcription factor Y subunit B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GU02_9STRA) HSP 1 Score: 159 bits (401), Expect = 3.870e-46 Identity = 74/103 (71.84%), Postives = 94/103 (91.26%), Query Frame = 1
Query: 121 DDIEELREQDRFLPIANISRLVKKRLPYNAKVAKDAKETTQECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKVYLAKYRAAVKGDR 429
DD +E+REQDR+LPIANISR++KK LP NAK+AKDAKET QECVSEFI +IT++ASDK Q EKRKTI+G+D++ +M+TLGFD+Y+EPLKVYLA+YR +VKGD+
Sbjct: 3 DDQQEVREQDRYLPIANISRIMKKSLPPNAKIAKDAKETVQECVSEFISFITSEASDKVQQEKRKTITGDDVLWAMSTLGFDNYVEPLKVYLARYRESVKGDK 105 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig782.15989.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig782.15989.1 >prot_E_fasciculatus_S2_contig782.15989.1 ID=prot_E_fasciculatus_S2_contig782.15989.1|Name=mRNA_E_fasciculatus_S2_contig782.15989.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=209bp SPAAVLCERESTRRGVRGNQPVPSTIYLRRAMAEHAGGGDDDIEELREQDback to top mRNA from alignment at E_fasciculatus_S2_contig782:4460..7646- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig782.15989.1 ID=mRNA_E_fasciculatus_S2_contig782.15989.1|Name=mRNA_E_fasciculatus_S2_contig782.15989.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3187bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig782:4460..7646- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig782:4460..7646- >mRNA_E_fasciculatus_S2_contig782.15989.1 ID=mRNA_E_fasciculatus_S2_contig782.15989.1|Name=mRNA_E_fasciculatus_S2_contig782.15989.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=627bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig782:4460..7646- (Ectocarpus fasciculatus EfasUO2)back to top |