mRNA_E_fasciculatus_S2_contig7802.15970.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7802.15970.1 vs.
Match: Lipoxygenase (n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX4_ECTSI) HSP 1 Score: 167 bits (423), Expect = 5.050e-41 Identity = 79/98 (80.61%), Postives = 88/98 (89.80%), Query Frame = 3
Query: 3 SYLPPMEIATIHVAMLTLLGDVFYTKLGQYSAHNFDDDRMLEPLNKFQRAIEDIEDDLVSDNAEVIFRWRQRGKNRRDANNMGYTTLLPDYIPQSINI 296
+YLPPMEIATIHVAMLTLLGD+F+TKLGQY HNFDDDR+ EPL KFQ+AIEDIEDDLV+DNA+V+ WRQRGK +R ANNM YTTLLPD IPQSINI
Sbjct: 555 NYLPPMEIATIHVAMLTLLGDIFHTKLGQYETHNFDDDRIAEPLAKFQQAIEDIEDDLVADNADVVSGWRQRGKAKRAANNMAYTTLLPDNIPQSINI 652
BLAST of mRNA_E_fasciculatus_S2_contig7802.15970.1 vs.
Match: Lipoxygenase (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW78_9PHAE) HSP 1 Score: 120 bits (302), Expect = 2.410e-28 Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 3
Query: 3 SYLPPMEIATIHVAMLTLLGDVFYTKLGQYSAHNFDDDRMLEPLNKFQRAIEDIEDDLVSDNAEVIFRWRQRGKNRRDANNMGYTTLLPDYIPQSINI 296
+YLPP+EIA V +LG VF+TKLG Y A+ F D R+ PL KFQ+AIEDIE D++++NA V WR+RGK ++ A N GYTTLLPD +PQSINI
Sbjct: 69 AYLPPLEIAAEQVVTGNILGTVFHTKLGDYDANQFSDKRVQAPLTKFQQAIEDIETDMINENAFVASSWRKRGKGKKAAANFGYTTLLPDKVPQSINI 166
BLAST of mRNA_E_fasciculatus_S2_contig7802.15970.1 vs.
Match: Lipoxygenase (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K920_9PHAE) HSP 1 Score: 129 bits (323), Expect = 8.290e-28 Identity = 60/98 (61.22%), Postives = 75/98 (76.53%), Query Frame = 3
Query: 3 SYLPPMEIATIHVAMLTLLGDVFYTKLGQYSAHNFDDDRMLEPLNKFQRAIEDIEDDLVSDNAEVIFRWRQRGKNRRDANNMGYTTLLPDYIPQSINI 296
+YLPP+EIAT V + T LG+VFYT LG Y A+ F D R+L PL KFQ+A+EDIE D+V +NA V+ WR+RGK +R A N GYTTLLP+ +PQSINI
Sbjct: 579 AYLPPLEIATRQVILFTFLGNVFYTTLGDYEANQFSDQRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKEKRAAANFGYTTLLPEKVPQSINI 676
BLAST of mRNA_E_fasciculatus_S2_contig7802.15970.1 vs.
Match: Lipoxygenase (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD72_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.190e-25 Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 3
Query: 3 SYLPPMEIATIHVAMLTLLGDVFYTKLGQYSAHNFDDDRMLEPLNKFQRAIEDIEDDLVSDNAEVIFRWRQRGKNRRDANNMGYTTLLPDYIPQSINI 296
+YLPP+EIA V +LG VF+TKLG Y A+ F D R+ PL KFQ+AIEDIE D+V++NA V+ WR+RGK ++ A N GYTTLLPD +PQSINI
Sbjct: 507 AYLPPLEIAAEQVVTGNILGTVFHTKLGDYDANQFSDKRVQAPLAKFQQAIEDIETDMVNENAFVVSSWRKRGKGKKAAANFGYTTLLPDKVPQSINI 604
BLAST of mRNA_E_fasciculatus_S2_contig7802.15970.1 vs.
Match: Lipoxygenase (n=1 Tax=Cylindrospermum sp. NIES-4074 TaxID=2005457 RepID=A0A1Z4QKG6_9NOST) HSP 1 Score: 75.1 bits (183), Expect = 1.790e-10 Identity = 42/96 (43.75%), Postives = 52/96 (54.17%), Query Frame = 3
Query: 9 LPPMEIATIHVAMLTLLGDVFYTKLGQYSAHNFDDDRMLEPLNKFQRAIEDIEDDLVSDNAEVIFRWRQRGKNRRDANNMGYTTLLPDYIPQSINI 296
LPP+E A + +L LLG V+YT LG YS F DDR+ PL KFQ+ ++DIE + QR N + Y LLP IPQSINI
Sbjct: 631 LPPLEQALNQINLLYLLGSVYYTNLGNYSTSAFTDDRVKSPLEKFQKNLKDIEQQI-----------NQRNSNSSGDRIIPYEFLLPTKIPQSINI 715
BLAST of mRNA_E_fasciculatus_S2_contig7802.15970.1 vs.
Match: lipoxygenase (n=1 Tax=Nostoc sp. WHI TaxID=2650611 RepID=UPI0018C4CE94) HSP 1 Score: 70.9 bits (172), Expect = 3.830e-9 Identity = 39/96 (40.62%), Postives = 51/96 (53.12%), Query Frame = 3
Query: 9 LPPMEIATIHVAMLTLLGDVFYTKLGQYSAHNFDDDRMLEPLNKFQRAIEDIEDDLVSDNAEVIFRWRQRGKNRRDANNMGYTTLLPDYIPQSINI 296
LPP++ A + +L LLG ++YT LG YSA F D + PL KFQ ++DIE + QR N + + Y LLP IPQSINI
Sbjct: 633 LPPLDQALNQINLLYLLGSIYYTNLGNYSASAFTDPNVTSPLEKFQTNLKDIEQQI-----------NQRNSNSKGDRIIPYEFLLPTNIPQSINI 717
BLAST of mRNA_E_fasciculatus_S2_contig7802.15970.1 vs.
Match: Lipoxygenase (n=1 Tax=Cyanothece sp. UBA12306 TaxID=2055757 RepID=A0A3B8Y9X0_9CYAN) HSP 1 Score: 69.3 bits (168), Expect = 1.070e-8 Identity = 40/96 (41.67%), Postives = 50/96 (52.08%), Query Frame = 3
Query: 9 LPPMEIATIHVAMLTLLGDVFYTKLGQYSAHNFDDDRMLEPLNKFQRAIEDIEDDLVSDNAEVIFRWRQRGKNRRDANNMGYTTLLPDYIPQSINI 296
LPP+E A + +LTLLG ++Y KLGQY F D R+ L KFQ +E+IED + R+ N Y LLP IPQSINI
Sbjct: 551 LPPLEQAQTQLNLLTLLGSIYYNKLGQYEQGYFSDPRVKPLLEKFQAKLEEIEDII----------------KERNFNRPEYNYLLPSKIPQSINI 630
BLAST of mRNA_E_fasciculatus_S2_contig7802.15970.1 vs.
Match: Uncharacterized (protein n=2 Tax=Cylindrospermum sp. FACHB-282 TaxID=2692794 RepID=UPI0016877630) HSP 1 Score: 66.6 bits (161), Expect = 6.330e-8 Identity = 39/96 (40.62%), Postives = 49/96 (51.04%), Query Frame = 3
Query: 9 LPPMEIATIHVAMLTLLGDVFYTKLGQYSAHNFDDDRMLEPLNKFQRAIEDIEDDLVSDNAEVIFRWRQRGKNRRDANNMGYTTLLPDYIPQSINI 296
LPP+E A + +L LLG V+YT LG YSA F D + L KFQ ++DIE + R N + + Y LLP IPQSINI
Sbjct: 431 LPPLEQALEQINLLYLLGSVYYTNLGNYSASAFTDPNVTSALEKFQTNLKDIEQQI-----------NLRNSNSKGDRIIPYEFLLPTKIPQSINI 515
BLAST of mRNA_E_fasciculatus_S2_contig7802.15970.1 vs.
Match: Arachidonate (15-lipoxygenase n=2 Tax=Archangium gephyra TaxID=48 RepID=A0A0G2ZHI1_9DELT) HSP 1 Score: 64.7 bits (156), Expect = 3.090e-7 Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 3
Query: 6 YLPPMEIATIHVAMLTLLGDVFYTKLGQYSAHNFDDDRMLEPLNKFQRAIEDIEDDLVSDNAEVIFRWRQRGKNRRDANNMG-YTTLLPDYIPQSINI 296
Y PP+E+AT+ + L LLG V +T+LG+Y F D ++ EPL +FQ +E++E L+S+ R+ G Y LLP +PQSINI
Sbjct: 580 YFPPLELATLQMEFLHLLGGVVHTRLGRYERDWFKDAKVREPLARFQSKLEELEA-LISE---------------RNRTRFGPYPFLLPSRVPQSINI 661
BLAST of mRNA_E_fasciculatus_S2_contig7802.15970.1 vs.
Match: lipoxygenase (n=1 Tax=Anabaena azotica TaxID=197653 RepID=UPI00168725FD) HSP 1 Score: 64.7 bits (156), Expect = 3.280e-7 Identity = 36/96 (37.50%), Postives = 51/96 (53.12%), Query Frame = 3
Query: 9 LPPMEIATIHVAMLTLLGDVFYTKLGQYSAHNFDDDRMLEPLNKFQRAIEDIEDDLVSDNAEVIFRWRQRGKNRRDANNMGYTTLLPDYIPQSINI 296
LPP+E + + +L LLG ++YT LG YSA F D + L++FQ +++ IE + QR N + + Y LLP IPQSINI
Sbjct: 649 LPPLEQSLRQIGLLYLLGSIYYTNLGNYSASAFPDPNVKPALDRFQTSLKYIEQQI-----------HQRNSNSKGDRIIPYEFLLPTKIPQSINI 733 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7802.15970.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7802.15970.1 >prot_E_fasciculatus_S2_contig7802.15970.1 ID=prot_E_fasciculatus_S2_contig7802.15970.1|Name=mRNA_E_fasciculatus_S2_contig7802.15970.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=94bp MEIATIHVAMLTLLGDVFYTKLGQYSAHNFDDDRMLEPLNKFQRAIEDIEback to top mRNA from alignment at E_fasciculatus_S2_contig7802:1354..4476- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7802.15970.1 ID=mRNA_E_fasciculatus_S2_contig7802.15970.1|Name=mRNA_E_fasciculatus_S2_contig7802.15970.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3123bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7802:1354..4476- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7802:1354..4476- >mRNA_E_fasciculatus_S2_contig7802.15970.1 ID=mRNA_E_fasciculatus_S2_contig7802.15970.1|Name=mRNA_E_fasciculatus_S2_contig7802.15970.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=282bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7802:1354..4476- (Ectocarpus fasciculatus EfasUO2)back to top |