prot_E_fasciculatus_S2_contig780.15969.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig780.15969.1
Unique Nameprot_E_fasciculatus_S2_contig780.15969.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length467
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig780.15969.1 vs. uniprot
Match: A0A6H5JPL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL5_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 9.660e-129
Identity = 298/466 (63.95%), Postives = 312/466 (66.95%), Query Frame = 0 
Query:    1 GTNECLKSTDNRCQAGAAAISFVGCDLGDEDMDDLGSCFDAAGRGTITELRLSDTSMTTIGEGLLEGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSLYLNDNGLSTLTAEDFGGLEAVSTLNLSANTLNSLPSGLLATLTALIVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSGNDDLQCVPSTAGTKLSETTLLVPEGVGEMCACPDEGVDVSCLDCEPGVDGYICTAITPQPTSAXXXXXXXXXWHPVEGCMSSAEECQEDPECMECHTITDQERWNSCTASIDVNDGCAAFGQHFCCLDEQSTSDCSTNDRAQAYVSCISETAGLQCSAWSCVGEANTSGTGASTVETDSETDSNTAAALRESLTGLNNFVGAAMTVAGFILTVVGAK 466
            GTNECLKSTD+RCQAGAAAISFVGC L DEDMDDLGSCFDAAGRGTI EL      + ++  G+ +G           XXXXXXXXXXXXXXXXXXXXX                                                SLYLNDN LS +TAEDF                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          L GNDDLQCVPS AGTKLSE TLL PEGVGEMCACP EGVDVSCLDCEPGV GY CTA TPQPTSAXXXXXXXX W+P EGC+  AE CQEDPECMECHT+TDQE WNSCTASI+ +DGCAAFGQHFCCLDEQSTSDCSTNDRAQAY SCISE AGLQCS WSCV EANTSGTG  TVE DS    N AAA  E LTG NN VGAAM V GFI+T +G K
Sbjct:   25 GTNECLKSTDSRCQAGAAAISFVGCGLADEDMDDLGSCFDAAGRGTIAELSFQHNELDSLPSGMFDGMSHLWSLDLGSXXXXXXXXXXXXXXXXXXXXX------------------------------------------------SLYLNDNTLSAVTAEDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLRSLTSLDLRGNDDLQCVPSMAGTKLSEVTLLAPEGVGEMCACPGEGVDVSCLDCEPGVGGYTCTATTPQPTSAXXXXXXXXPWNPAEGCLPFAEACQEDPECMECHTVTDQEGWNSCTASINSDDGCAAFGQHFCCLDEQSTSDCSTNDRAQAYFSCISEAAGLQCSPWSCVREANTSGTGTPTVEPDS----NNAAASCEPLTGWNNLVGAAMIVVGFIVTTMGEK 438
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BLAST of mRNA_E_fasciculatus_S2_contig780.15969.1 vs. uniprot
Match: D7G8B9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B9_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 2.130e-33
Identity = 163/179 (91.06%), Postives = 167/179 (93.30%), Query Frame = 0 
Query:   19 AISFVGCDLGDEDMDDLGSCFDAAGRGTITELRLSDTSMTTIGEGLLEGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSLYLNDNGLSTLTAEDFGGLEAVSTLNLSANTLNSLPSGLLATLTALIVL 197
            A SFVGC L DEDMDDLGSCFDAAGRGTITELRLSDTSMTT+GEGLLEGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KSLY NDN LS +TAE F GLEAVSTLNLS+NTL+SLPSG L TLTALIVL
Sbjct:   16 ASSFVGCGLADEDMDDLGSCFDAAGRGTITELRLSDTSMTTVGEGLLEGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKSLYFNDNALSAVTAECFDGLEAVSTLNLSSNTLSSLPSGFLVTLTALIVL 194
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig780.15969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPL5_9PHAE9.660e-12963.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8B9_ECTSI2.130e-3391.06Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 191..214
e-value: 0.045
score: 22.9
coord: 116..139
e-value: 0.0024
score: 27.1
coord: 143..166
e-value: 0.019
score: 24.1
coord: 215..238
e-value: 0.0091
score: 25.2
coord: 68..91
e-value: 0.014
score: 24.6
coord: 239..263
e-value: 30.0
score: 9.4
coord: 167..190
e-value: 7.7
score: 14.2
coord: 92..115
e-value: 0.051
score: 22.7
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 116..135
e-value: 24.0
score: 10.8
coord: 92..111
e-value: 54.0
score: 8.1
coord: 215..234
e-value: 110.0
score: 5.8
coord: 239..259
e-value: 160.0
score: 4.4
NoneNo IPR availablePANTHERPTHR45617FAMILY NOT NAMEDcoord: 27..175
coord: 117..218
NoneNo IPR availablePANTHERPTHR45617:SF61ELRR (EXTRACELLULAR LEUCINE-RICH REPEAT) ONLYcoord: 27..175
coord: 117..218
NoneNo IPR availablePANTHERPTHR45617FAMILY NOT NAMEDcoord: 143..360
NoneNo IPR availablePANTHERPTHR45617:SF61ELRR (EXTRACELLULAR LEUCINE-RICH REPEAT) ONLYcoord: 143..360
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 448..465
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..447
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 466..466
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 26..270
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 195..251
e-value: 9.4E-15
score: 54.1
coord: 47..105
e-value: 2.0E-7
score: 30.7
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 145..167
e-value: 1.9
score: 9.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 22..276
e-value: 8.5E-52
score: 177.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig780contigE_fasciculatus_S2_contig780:5414..14637 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig780.15969.1mRNA_E_fasciculatus_S2_contig780.15969.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig780 5414..14637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig780.15969.1 ID=prot_E_fasciculatus_S2_contig780.15969.1|Name=mRNA_E_fasciculatus_S2_contig780.15969.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=467bp
GTNECLKSTDNRCQAGAAAISFVGCDLGDEDMDDLGSCFDAAGRGTITEL
RLSDTSMTTIGEGLLEGFGALRELRMENNLFSAIPPGLFQDVEALEFLSF
QHNELESLPSGMFDGMSHLLSLDLGSNRLNSLPEGVFGTSSGLGSLKSLY
LNDNGLSTLTAEDFGGLEAVSTLNLSANTLNSLPSGLLATLTALIVLTLD
SNGLSVLPVDSFDGLDKLQILYLNNNALSTLSAGLLADLASLTSLDLSGN
DDLQCVPSTAGTKLSETTLLVPEGVGEMCACPDEGVDVSCLDCEPGVDGY
ICTAITPQPTSAPTPAPTPAPWHPVEGCMSSAEECQEDPECMECHTITDQ
ERWNSCTASIDVNDGCAAFGQHFCCLDEQSTSDCSTNDRAQAYVSCISET
AGLQCSAWSCVGEANTSGTGASTVETDSETDSNTAAALRESLTGLNNFVG
AAMTVAGFILTVVGAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp