mRNA_E_fasciculatus_S2_contig7780.15945.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7780.15945.1 vs.
Match: FAD-binding (PCMH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K8_9PHAE) HSP 1 Score: 441 bits (1133), Expect = 2.150e-149 Identity = 239/298 (80.20%), Postives = 245/298 (82.21%), Query Frame = 1
Query: 1 EGVLGLARGRLAEVLSAVEFMDREAVALTLEKCQGVRSPFPPPTNGADDDGGHKYYVLIETSGSDAEHDAEKMEGFLEAAMELGPVVDGAVAQDLSQLQAMWSLREHAPVAVSLSGYTYKYDVSIPVGDFKALADETRRRLRGLFPEGGG--ATVVAYGHLGDGNLHLNVCVPAAAGGGDGGAGEPAAATG------------------------------------RADVLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPEGVLGVMRGVKGMLDPRGIMNPFKVLPPA 780
E VL LARGRLAEVLSAVEFMD+E VALTLEKCQGVRSPFPPPT G+DD GGHKYYVLIETSGSDA+HDAEKMEGFLEAAMELG VVDGAVAQDLSQLQAMWSLREHAPVAVSL+GYTYKYD+SIPVGDFKALADETRRRLRGLFPEGGG ATVVAYGHLGDGNLHLNVCV +A GG GG EP AATG RADVLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPE VLGVMR VKGMLDPRGIMNPFKVLPPA
Sbjct: 273 ESVLSLARGRLAEVLSAVEFMDKETVALTLEKCQGVRSPFPPPTTGSDD-GGHKYYVLIETSGSDADHDAEKMEGFLEAAMELGSVVDGAVAQDLSQLQAMWSLREHAPVAVSLAGYTYKYDISIPVGDFKALADETRRRLRGLFPEGGGGAATVVAYGHLGDGNLHLNVCV--SADGGSGGGEEPTAATGGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAWRADVLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPEAVLGVMRDVKGMLDPRGIMNPFKVLPPA 567
BLAST of mRNA_E_fasciculatus_S2_contig7780.15945.1 vs.
Match: FAD-binding (domain-containing protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z5Y5_COCSC) HSP 1 Score: 214 bits (545), Expect = 4.150e-62 Identity = 120/260 (46.15%), Postives = 163/260 (62.69%), Query Frame = 1
Query: 19 ARGRLAEVLSAVEFMDREAVALTLEKCQGVRSPFPPPTNGADDDGGHKYYVLIETSGSDAEHDAEKMEGFLEAAMELGPVVDGAVAQDLSQLQAMWSLREHAPVAVSLSGYTYKYDVSIPVGDFKALADETRRRLRGLFPEGGGATVVAYGHLGDGNLHLNVCVPAAAGGGDGGAGEPAAATGRAD--VLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPEGVLGVMRGVKGMLDPRGIMNPFKVLPPA*ASR 792
AR +L E+LSA EF+D++++ LTLE +GVR+P P D +Y+++ETSGS+ HD EKMEGFLE ME G V+DG +AQD +Q A+W LRE VA+ +G YKYD+S+PV + +L +ETR+RL GL E VV YGHLGDGNLHLN+ +T D +L +EPFV+EW +RRGS+SAEHG+GQ K + + + + +M +K + DP GI+NP+KVLP ASR
Sbjct: 250 ARQKLGEILSAFEFLDQQSLELTLEHLEGVRNPLP--------DTQTPFYLVVETSGSNEAHDYEKMEGFLEEVMEEGWVLDGTIAQDSTQTAAIWGLREGISVALKHAGAVYKYDLSMPVPEMYSLVEETRQRLAGLPVE-----VVGYGHLGDGNLHLNI------------------STKHYDENILKHIEPFVYEWTAARRGSVSAEHGLGQMKADCIGYTKSQEAVKLMGQIKRVFDPNGILNPYKVLPQDGASR 478
BLAST of mRNA_E_fasciculatus_S2_contig7780.15945.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BB78_CHRCT) HSP 1 Score: 214 bits (544), Expect = 1.390e-61 Identity = 123/255 (48.24%), Postives = 159/255 (62.35%), Query Frame = 1
Query: 13 GLARGRLAEVLSAVEFMDREAVALTLEKCQGVRSPFPPPTNGADDDGGHKYYVLIETSGSDAEHDAEKMEGFLEAAMELGPVVDGAVAQDLSQLQAMWSLREHAPVAVSLSGYTYKYDVSIPVGDFKALADETRRRLRGLFPEGGGATVVAYGHLGDGNLHLNVCVPAAAGGGDGGAGEPAAATGRADVLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPEGVLGVMRGVKGMLDPRGIMNPFKVLPP 777
G A+ L EVLSAVEF+D E+ L L GVR+P +G ++Y+LIE SGS+ HD+EK+ FLE ME G V DG +AQD +Q Q +W +RE A+S SG YKYDVSIP+ + +L +E R RL E GA V +GHLGDGNLHLN+ P G E +A +V AA+EPFVFEW+ RRGSISAEHG+G K +L + + ++ VM+G+K LDP+ IMNP+KVLPP
Sbjct: 294 GAAKRDLGEVLSAVEFLDSES--LELVTAHGVRAPL---------EGNCRHYMLIELSGSNEAHDSEKLSTFLENVMESGAVADGTIAQDTTQSQGIWKVREGITEALSKSGAVYKYDVSIPLTELYSLVEEMRVRL-----EPHGALVSGFGHLGDGNLHLNIHTP--------GVFEKSA-----EVHAAIEPFVFEWIAQRRGSISAEHGIGVMKPAFLHMSKTSQMINVMQGIKNQLDPKNIMNPYKVLPP 519
BLAST of mRNA_E_fasciculatus_S2_contig7780.15945.1 vs.
Match: D-2-hydroxyglutarate (mitochondrial-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JB16_9EUKA) HSP 1 Score: 211 bits (538), Expect = 8.190e-61 Identity = 119/255 (46.67%), Postives = 153/255 (60.00%), Query Frame = 1
Query: 13 GLARGRLAEVLSAVEFMDREAVALTLEKCQGVRSPFPPPTNGADDDGGHKYYVLIETSGSDAEHDAEKMEGFLEAAMELGPVVDGAVAQDLSQLQAMWSLREHAPVAVSLSGYTYKYDVSIPVGDFKALADETRRRLRGLFPEGGGATVVAYGHLGDGNLHLNVCVPAAAGGGDGGAGEPAAATGRADVLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPEGVLGVMRGVKGMLDPRGIMNPFKVLPP 777
G A+ L EVLSAVEF+D E+ L G P P G ++Y+L+E SGS AEHD K+ GFLE M G V DG +AQD +Q Q +W +RE A+ G YKYDVSIP+ + L + R RL E GA V +GHLGDGNLHLN+ P +PA VLAA+EPFV+EW+ RRGSISAEHG+G K +L + + E ++ +MRG+KG+LDP+GI+NP+KVLPP
Sbjct: 284 GAAKRDLGEVLSAVEFLDAESYELVNRHLGGRPPPLAP---------GSRHYMLLELSGSRAEHDQAKLSGFLEHVMAEGLVADGTIAQDQAQSQGIWRVREGITSALGKEGAVYKYDVSIPLAELYTLCEVMRARL-----EAHGALVTGFGHLGDGNLHLNIYTPGRFN------KDPA-------VLAAIEPFVYEWIAERRGSISAEHGLGVMKPAFLRMSKSESMIELMRGIKGLLDPKGILNPYKVLPP 511
BLAST of mRNA_E_fasciculatus_S2_contig7780.15945.1 vs.
Match: D-2-hydroxyglutarate (dehydrogenase, mitochondrial-like isoform X2 n=2 Tax=Punica granatum TaxID=22663 RepID=A0A6P8E2R4_PUNGR) HSP 1 Score: 208 bits (530), Expect = 2.050e-60 Identity = 114/254 (44.88%), Postives = 153/254 (60.24%), Query Frame = 1
Query: 19 ARGRLAEVLSAVEFMDREAVALTLEKCQGVRSPFPPPTNGADDDGGHKYYVLIETSGSDAEHDAEKMEGFLEAAMELGPVVDGAVAQDLSQLQAMWSLREHAPVAVSLSGYTYKYDVSIPVGDFKALADETRRRLRGLFPEGGGATVVAYGHLGDGNLHLNVCVPAAAGGGDGGAGEPAAATGRAD--VLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPEGVLGVMRGVKGMLDPRGIMNPFKVLP 774
A+ +L E+LSA EF+D +++AL L +GVR+P PP H +YVLIET+GS+ +D EK+E FL +AME G + DG VAQD+ Q ++W +RE P A+ +G YKYD+S+PV L +E R RL L ATVVAYGHLGDGNLHLN+ P + D +LA +EPFV+EW RGSISAEHG+G K + + + +M +K +LDP GI+NP+KVLP
Sbjct: 211 AKRKLGEILSAFEFLDEQSMALALSHLEGVRNPLPPSL--------HNFYVLIETTGSNESYDREKLEAFLLSAMEGGLISDGIVAQDIQQASSVWHIREGLPEALIKAGANYKYDLSLPVEKLYNLVEEMRTRLENL------ATVVAYGHLGDGNLHLNISAP------------------QYDDAILAQIEPFVYEWTSKNRGSISAEHGLGLMKANKILYSKSPAAVNLMASIKKLLDPNGIVNPYKVLP 432
BLAST of mRNA_E_fasciculatus_S2_contig7780.15945.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NUZ8_9EUKA) HSP 1 Score: 210 bits (534), Expect = 2.790e-60 Identity = 124/262 (47.33%), Postives = 158/262 (60.31%), Query Frame = 1
Query: 1 EGVL---GLARGRLAEVLSAVEFMDREAVALTLEKCQGVRSPFPPPTNGADDDGGHKYYVLIETSGSDAEHDAEKMEGFLEAAMELGPVVDGAVAQDLSQLQAMWSLREHAPVAVSLSGYTYKYDVSIPVGDFKALADETRRRLRGLFPEGGGATVVAYGHLGDGNLHLNVCVPAAAGGGDGGAGEPAAATGRADVLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPEGVLGVMRGVKGMLDPRGIMNPFKVLPP 777
EGVL A+ L EVLSAVEF+D+E+ L GVR P P+ ++Y+LIE SGS+ HD+EK+ FLE ME G VVDG +AQD +Q Q +W +RE A+S SG YKYDVSIP+ + L +E R RL L GA V +GHLGDGNLHLN+ P G E + A V A+EPFVFEW+ RRGSISAEHG+G K +L + + ++ VM+G+K LDP I+NP+KVLPP
Sbjct: 268 EGVLETFSAAKRDLGEVLSAVEFLDQESFELVTS--HGVRDPLGAPS---------RHYMLIELSGSNEAHDSEKLSAFLENVMEGGAVVDGTIAQDQTQSQGIWKIREGITEALSKSGAVYKYDVSIPLTELYTLVEEMRARLAPL-----GALVSGFGHLGDGNLHLNIYTP--------GVFEKSQA-----VHEAIEPFVFEWIAERRGSISAEHGIGVMKPAFLHMSKTPQMINVMQGIKTQLDPNNILNPYKVLPP 500
BLAST of mRNA_E_fasciculatus_S2_contig7780.15945.1 vs.
Match: FAD-binding (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEX4_9STRA) HSP 1 Score: 208 bits (529), Expect = 9.980e-60 Identity = 120/256 (46.88%), Postives = 148/256 (57.81%), Query Frame = 1
Query: 7 VLGLARGRLAEVLSAVEFMDREAVALTLEKCQGVRSPFPPPTNGADDDGGHKYYVLIETSGSDAEHDAEKMEGFLEAAMELGPVVDGAVAQDLSQLQAMWSLREHAPVAVSLSGYTYKYDVSIPVGDFKALADETRRRLRGLFPEGGGATVVAYGHLGDGNLHLNVCVPAAAGGGDGGAGEPAAATGRADVLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPEGVLGVMRGVKGMLDPRGIMNPFKVLP 774
+ LA+ L E+LSAVE MD AV + +C G++ P +GA + VL+ETSGS EHD KM L+ A V DG +AQD+SQ +W++REH PVA + GY YKYDVS+P+ F L RRR + L A YGHLGDGNLHLNV A +VL ALEPFVF+WVV+ GSISAEHGVGQHKR +L LQ+ L +M +K DPRGI+NP KVLP
Sbjct: 253 LFALAKTALGEILSAVELMDSLAVETAMARCPGLKRPME-LEDGA-------FAVLLETSGSCEEHDKAKMGALLDRAFAAEIVDDGVIAQDMSQAADLWAIREHVPVAAATGGYQYKYDVSVPIPRFYELVRAVRRRFQELSLAEDRAAAFGYGHLGDGNLHLNVVC----------------ARKDDEVLRALEPFVFDWVVAAGGSISAEHGVGQHKRAFLGLQKGPEALALMAAIKRAFDPRGILNPGKVLP 484
BLAST of mRNA_E_fasciculatus_S2_contig7780.15945.1 vs.
Match: FAD-binding (PCMH-type domain-containing protein n=5 Tax=Prunus TaxID=3754 RepID=A0A251NCB4_PRUPE) HSP 1 Score: 206 bits (525), Expect = 1.050e-59 Identity = 112/254 (44.09%), Postives = 152/254 (59.84%), Query Frame = 1
Query: 19 ARGRLAEVLSAVEFMDREAVALTLEKCQGVRSPFPPPTNGADDDGGHKYYVLIETSGSDAEHDAEKMEGFLEAAMELGPVVDGAVAQDLSQLQAMWSLREHAPVAVSLSGYTYKYDVSIPVGDFKALADETRRRLRGLFPEGGGATVVAYGHLGDGNLHLNVCVPAAAGGGDGGAGEPAAATGRAD--VLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPEGVLGVMRGVKGMLDPRGIMNPFKVLP 774
A+ +L E+LSA EF+D +++ L L GVR+P PP HK+Y+LIET+GSD +D +K+EGFL AME G + DGA+AQD++Q + W +RE P A+ +G YKYD+S+PV L +E R RL A VV YGHLGDGNLHLN+ +T + D +L +EPFV+EW RGSISAEHG+G K + +P + +M +K MLDP+GI+NP+KVLP
Sbjct: 208 AKRKLGEILSAFEFLDSKSLDLVLNHLDGVRNPLPPTL--------HKFYILIETTGSDEPYDRQKLEGFLLHAMEAGLISDGALAQDINQASSFWRIREGIPEALMKAGAVYKYDLSLPVEKMYDLVEEMRTRLSDS------ANVVGYGHLGDGNLHLNI------------------STAQYDDGILTQIEPFVYEWTSKHRGSISAEHGLGLMKANEIFYSKPTATVSLMASIKKMLDPKGILNPYKVLP 429
BLAST of mRNA_E_fasciculatus_S2_contig7780.15945.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4A3_PYTOL) HSP 1 Score: 208 bits (529), Expect = 1.330e-59 Identity = 117/254 (46.06%), Postives = 154/254 (60.63%), Query Frame = 1
Query: 19 ARGRLAEVLSAVEFMDREAVALTLEKCQGVRSPFPPPTNGADDDGGHKYYVLIETSGSDAEHDAEKMEGFLEAAMELGPVVDGAVAQDLSQLQAMWSLREHAPVAVSLSGYTYKYDVSIPVGDFKALADETRRRLRGLFPEGGGATVVAYGHLGDGNLHLNVCVPAAAGGGDGGAGEPAAATGRAD--VLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPEGVLGVMRGVKGMLDPRGIMNPFKVLP 774
A+ L EVLSAVEF+DR+++ + L + + P + + YY+LIETSGS+ EHD EK+E +LE+AM G VVDG VAQD Q + ++ +RE +A+S GY YKYDVS+P+ + + +TR RL GA VV YGHLGD NLHLNV +T D V ALEPFVFEW RGSISAEHG+G HK YL L + + + +MR +K M+DP+GI+NP+KVLP
Sbjct: 278 AKQHLGEVLSAVEFLDRQSLDMVLSQQDWTKDPL---------ESSYPYYLLIETSGSNTEHDMEKLEAYLESAMTKGMVVDGTVAQDAVQARKLFMIREDITLALSQRGYVYKYDVSLPISQYYDIVKDTRDRLEEF-----GAKVVGYGHLGDCNLHLNV------------------STLEYDERVFQALEPFVFEWTSKYRGSISAEHGIGTHKPEYLHLSKEKNAINLMRQMKQMMDPKGILNPYKVLP 499
BLAST of mRNA_E_fasciculatus_S2_contig7780.15945.1 vs.
Match: Putative (oxidoreductase n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6RM20_ROSCH) HSP 1 Score: 209 bits (533), Expect = 1.520e-59 Identity = 118/254 (46.46%), Postives = 149/254 (58.66%), Query Frame = 1
Query: 19 ARGRLAEVLSAVEFMDREAVALTLEKCQGVRSPFPPPTNGADDDGGHKYYVLIETSGSDAEHDAEKMEGFLEAAMELGPVVDGAVAQDLSQLQAMWSLREHAPVAVSLSGYTYKYDVSIPVGDFKALADETRRRLRGLFPEGGGATVVAYGHLGDGNLHLNVCVPAAAGGGDGGAGEPAAATGRAD--VLAALEPFVFEWVVSRRGSISAEHGVGQHKRGYLSLQRPEGVLGVMRGVKGMLDPRGIMNPFKVLP 774
A+ +L E+LSA EF+D A+ L L GVR+P PP H +YVLIET+GSD D EK+E FL AME G + DGA+AQD++Q A W +RE P A+ +G YKYD+S+PV L DE R RL G A VV YGHLGDGNLHLNV P + D LA +EPFV+EW + RGSISAEHG+G K + +P + +M +K MLDP+GI+NP+KVLP
Sbjct: 347 AKRKLGEILSAFEFLDSHALDLVLNHLDGVRNPLPPTI--------HNFYVLIETTGSDETCDREKLEAFLVHAMEGGLISDGAIAQDINQASAFWYIREGVPEALMKAGAVYKYDLSLPVEKMYDLVDEMRTRL------GDSANVVGYGHLGDGNLHLNVSTP------------------QYDDKTLAQIEPFVYEWTSAHRGSISAEHGLGLMKANKIFYSKPTATVNLMASIKKMLDPKGILNPYKVLP 568 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7780.15945.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7780.15945.1 >prot_E_fasciculatus_S2_contig7780.15945.1 ID=prot_E_fasciculatus_S2_contig7780.15945.1|Name=mRNA_E_fasciculatus_S2_contig7780.15945.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=241bp MDREAVALTLEKCQGVRSPFPPPTNGADDDGGHKYYVLIETSGSDAEHDAback to top mRNA from alignment at E_fasciculatus_S2_contig7780:3808..5864+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7780.15945.1 ID=mRNA_E_fasciculatus_S2_contig7780.15945.1|Name=mRNA_E_fasciculatus_S2_contig7780.15945.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2057bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7780:3808..5864+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7780:3808..5864+ >mRNA_E_fasciculatus_S2_contig7780.15945.1 ID=mRNA_E_fasciculatus_S2_contig7780.15945.1|Name=mRNA_E_fasciculatus_S2_contig7780.15945.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=723bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7780:3808..5864+ (Ectocarpus fasciculatus EfasUO2)back to top |