mRNA_E_fasciculatus_S2_contig7773.15938.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E_fasciculatus_S2_contig7773.15938.1
Unique Name	mRNA_E_fasciculatus_S2_contig7773.15938.1
Type	mRNA
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.
Match: CULLIN_2 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT61_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 2.960e-87
Identity = 147/163 (90.18%), Postives = 153/163 (93.87%), Query Frame = 1

Query:    1 NQETMQMVRDILMYMNRTYVSFNKKMPVYETGLVVFRDTVARHDKVKGWLQSLLLQNIADERPSRLIDRDLMETPLSMLSGLGVDEVAVYEEGLENNFLSTTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLASGTEPKLKHIVETELIYNHAR 489
            +Q TMQMVRDILMYM+RTYVSFNKKMPVYE GLVVFRDTVARHDKVKG LQSLLLQNIADER SRLIDRDLM+T LSMLSGLGVD VAVYEE  EN FL+TTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLA+GTEPKLKHIVETELI NHA+
Sbjct:  105 HQVTMQMVRDILMYMDRTYVSFNKKMPVYEMGLVVFRDTVARHDKVKGRLQSLLLQNIADERASRLIDRDLMKTSLSMLSGLGVDGVAVYEEDFENEFLATTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLAAGTEPKLKHIVETELIRNHAK 267

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BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BUF6_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.780e-56
Identity = 102/160 (63.75%), Postives = 126/160 (78.75%), Query Frame = 1

Query:   10 TMQMVRDILMYMNRTYVSFNKKMPVYETGLVVFRDTVARHDKVKGWLQSLLLQNIADERPSRLIDRDLMETPLSMLSGLGVDEVAVYEEGLENNFLSTTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLASGTEPKLKHIVETELIYNHAR 489
            TM MVRDILMYM+RTYV+ NKK+ VY+ GL++FRDTVARH++VK  L+ +LL+NIA+ER  +LI+R LM   LSML+ LGVD  +VYEE  E  FL TTR FYR ES +++A+NTCP Y+ KAE RLGEEAAR  ++L   TEPKLK I ETELIYNHA+
Sbjct:    1 TMMMVRDILMYMDRTYVAQNKKVAVYDLGLIIFRDTVARHEQVKDRLRHILLENIANERSGQLIERMLMRNTLSMLAELGVDGPSVYEEDFEQYFLETTRDFYRRESLDYLAQNTCPDYLTKAETRLGEEAARVNHFLNQSTEPKLKQIAETELIYNHAK 160

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BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.
Match: Cullin (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7J2_9STRA)

HSP 1 Score: 179 bits (455), Expect = 8.520e-48
Identity = 96/163 (58.90%), Postives = 115/163 (70.55%), Query Frame = 1

Query:    1 NQETMQMVRDILMYMNRTYVSFNKKMPVYETGLVVFRDTVARHDKVKGWLQSLLLQNIADERPSRLIDRDLMETPLSMLSGLGVDEVAVYEEGLENNFLSTTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLASGTEPKLKHIVETELIYNHAR 489
            +Q TM M+RDILMYM+RTYV    +M VY+ GL +FRD + RHDKV+  L++LLL+N+A+ER  RLIDR LM+T L ML  + VD  +VYE+  E  FL  T  FYRAES  FIA NTCP YM+K E RL EEAAR   YL  GT PKL  IVET LI +HAR
Sbjct:  107 HQVTMVMIRDILMYMDRTYVKQMNRMLVYDLGLQIFRDAIVRHDKVRDRLRALLLRNVAEERAGRLIDRGLMKTILGMLVDVSVDGPSVYEKEFEAPFLEATARFYRAESLGFIAANTCPDYMRKVEARLAEEAARGTQYLHVGTVPKLNAIVETALIQDHAR 269

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BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.
Match: CULLIN_2 (domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UW69_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.220e-47
Identity = 96/160 (60.00%), Postives = 114/160 (71.25%), Query Frame = 1

Query:   10 TMQMVRDILMYMNRTYVSFNKKMPVYETGLVVFRDTVARHDKVKGWLQSLLLQNIADERPSRLIDRDLMETPLSMLSGLGVDEVAVYEEGLENNFLSTTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLASGTEPKLKHIVETELIYNHAR 489
            TM M+RDILMYM+R Y    +K+ +Y+ GLVVFRDT+ RH KVK  L+ LLLQNI  ER   LIDR LM+  L+ML  LGV    VYEE  EN+FL TT AFY AE+Q  + +NTCP +M+KAE RL EE AR + YL S TEPKLK IVE ELI NHA+
Sbjct:  108 TMSMIRDILMYMDRNYALPKRKLLIYDIGLVVFRDTIPRHPKVKDRLKWLLLQNIDLERNGELIDRGLMKDTLAMLVDLGVRSNNVYEEDFENDFLRTTTAFYNAEAQRLLDQNTCPDFMEKAERRLAEEHARVMQYLNSSTEPKLKAIVERELIANHAK 267

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BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.
Match: CULLIN_2 (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTV1_9STRA)

HSP 1 Score: 177 bits (448), Expect = 7.330e-47
Identity = 92/162 (56.79%), Postives = 115/162 (70.99%), Query Frame = 1

Query:    1 NQETMQMVRDILMYMNRTYVSFNKKMPVYETGLVVFRDTVARHDKVKGWLQSLLLQNIADERPSRLIDRDLMETPLSMLSGLGVDEVAVYEEGLENNFLSTTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLASGTEPKLKHIVETELIYNHA 486
            +Q TM MVRDILMYM+RTYV  + K  VY+ GL +FRD +ARH +VK  L+SLLL +I  ER  +L+DR L+ + LSML  LG++  AVYEE  E  FL TTRAFYRAES + I++NTCP YM+KAE RL EE  R   YL   T+PKL+ I+E EL+  HA
Sbjct:   87 HQVTMSMVRDILMYMDRTYVPQHNKTKVYDLGLRIFRDAIARHPQVKDRLRSLLLGSIRAEREGQLVDRSLLRSTLSMLMELGIEGTAVYEEDFEREFLRTTRAFYRAESLDVISKNTCPVYMRKAEQRLLEEQERVAQYLDRSTDPKLRAILEEELVKTHA 248

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BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0A7_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.960e-46
Identity = 88/163 (53.99%), Postives = 120/163 (73.62%), Query Frame = 1

Query:    1 NQETMQMVRDILMYMNRTYVSFNKKMPVYETGLVVFRDTVARHDKVKGWLQSLLLQNIADERPSRLIDRDLMETPLSMLSGLGVDEVAVYEEGLENNFLSTTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLASGTEPKLKHIVETELIYNHAR 489
            +Q+TM MVRDILMYM+RT+V+  K+ PVY  GL++FR+T+ RH +V+  L+ +LL+N+A ER  +LIDR LM+  L+ML+ LG+D ++VYEE  E +FL  TR FY +ES E+I++NTCP Y+ KA+ RL EE AR  +YL   TE KLK I E ELI  HA+
Sbjct:  104 HQDTMVMVRDILMYMDRTFVAQQKRTPVYAMGLILFRETIERHPQVRDRLRQILLENVAMERAGQLIDRILMKHTLAMLADLGIDGLSVYEEDFEAHFLGATRNFYHSESMEYISQNTCPDYLTKAKTRLAEEQARVRHYLNKSTESKLKQIAEAELIERHAK 266

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BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.
Match: CULLIN_2 (domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWZ6_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.070e-46
Identity = 91/160 (56.88%), Postives = 116/160 (72.50%), Query Frame = 1

Query:   10 TMQMVRDILMYMNRTYVSFNKKMPVYETGLVVFRDTVARHDKVKGWLQSLLLQNIADERPSRLIDRDLMETPLSMLSGLGVDEVAVYEEGLENNFLSTTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLASGTEPKLKHIVETELIYNHAR 489
            TM M+RDILMYM+RTYVS  +KMP+Y+ GLV+FRD++ RH +VK  L+  LLQNI  ER   +I+R +M+  L ML  LGV   +VYEE  EN+FL TT  FY AE+Q  + +NTCP +M+KAE RL EE +R + YL + TEPKLK IVE ELI NHA+
Sbjct:  108 TMTMIRDILMYMDRTYVSQKRKMPIYDMGLVLFRDSIVRHPQVKDRLKWHLLQNIELERNGEIIERGVMKDILGMLVDLGVHSNSVYEEDFENDFLHTTATFYNAEAQRLLDQNTCPDFMQKAERRLAEEHSRVLQYLNNSTEPKLKAIVERELIANHAK 267

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BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.
Match: CULLIN_2 (domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHJ9_AURAN)

HSP 1 Score: 175 bits (444), Expect = 3.010e-46
Identity = 92/162 (56.79%), Postives = 114/162 (70.37%), Query Frame = 1

Query:    1 NQETMQMVRDILMYMNRTYVSFNKKMPVYETGLVVFRDTVARHDKVKGWLQSLLLQNIADERPSRLIDRDLMETPLSMLSGLGVDEVAVYEEGLENNFLSTTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLASGTEPKLKHIVETELIYNHA 486
            +Q TM MVRDILMYM+RTYV  NKKM VY+ GL  FR+T+ RHD V+  L+ +LL+N+  ER  RLID+  M   L ML+ LG++  +VYEE  E  FL  TR+FYR ES+ F+A NTCP Y+KK E RL EE  R  NYL + T PKL+HIVE+ELI  HA
Sbjct:  104 HQVTMVMVRDILMYMDRTYVPQNKKMAVYDVGLRAFRETITRHDHVRDRLRCVLLENVRIERAGRLIDQTGMRCALYMLADLGIESSSVYEEDFECFFLEETRSFYRNESRAFLAANTCPDYLKKVESRLNEEQDRVPNYLHASTRPKLEHIVESELISAHA 265

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BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.
Match: Cullin (domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6X418_9STRA)

HSP 1 Score: 165 bits (418), Expect = 7.700e-46
Identity = 91/160 (56.88%), Postives = 113/160 (70.62%), Query Frame = 1

Query:   10 TMQMVRDILMYMNRTYVSFNKKMPVYETGLVVFRDTVARHDKVKGWLQSLLLQNIADERPSRLIDRDLMETPLSMLSGLGVDEVAVYEEGLENNFLSTTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLASGTEPKLKHIVETELIYNHAR 489
            TM M+RDILMYM+RTYVS  +KM +Y+ GLV+F +++ARH +VK  L+  LL NI  ER   LIDR +M+  L ML  LGV   +VYEE  EN FLSTT AFY AE+Q  + +NTCP +M+KA+ RL EE  R + YL S TE KLK IVE ELI NHA+
Sbjct:  108 TMTMIRDILMYMDRTYVSQKRKMLIYDMGLVLFLESIARHPQVKDRLKWHLLANIDLERNGELIDRGVMKDILGMLVDLGVRSNSVYEEDFENEFLSTTAAFYNAEAQRLLDQNTCPDFMEKADRRLTEEHHRVMQYLNSSTELKLKAIVERELIANHAK 267

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BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.
Match: CULLIN_2 (domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CH64_SAPPC)

HSP 1 Score: 173 bits (439), Expect = 1.550e-45
Identity = 89/160 (55.62%), Postives = 115/160 (71.88%), Query Frame = 1

Query:   10 TMQMVRDILMYMNRTYVSFNKKMPVYETGLVVFRDTVARHDKVKGWLQSLLLQNIADERPSRLIDRDLMETPLSMLSGLGVDEVAVYEEGLENNFLSTTRAFYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLASGTEPKLKHIVETELIYNHAR 489
            TM M+RDILMYM+RTYV   +K+P+Y+ GL++FRDT+ARH  VK  L+ +LLQNI +ER   LIDR +M+  LSML  LG+    VYE+  E  FL TT AFY AE+Q  + +NTCP +M+KA+ RL EE +R + YL + TE KLK IVE ELI NHA+
Sbjct:  108 TMTMIRDILMYMDRTYVPGKRKVPIYDMGLLLFRDTIARHPNVKDRLRWMLLQNIENERNGELIDRGIMKGILSMLVDLGLHTNTVYEDDFETEFLRTTAAFYNAEAQRLLDQNTCPDFMQKADKRLSEEHSRVLQYLNASTEAKLKAIVERELIENHAK 267

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.

BLAST of mRNA_E_fasciculatus_S2_contig7773.15938.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
CULLIN_2	2.960e-87	90.18	domain-containing protein n=2 Tax=Ectocarpus TaxID...	[more]
Hypothetical	2.780e-56	63.75	protein n=1 Tax=Florenciella parvula TaxID=236787 ...	[more]
Cullin	8.520e-48	58.90	n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z...	[more]
CULLIN_2	4.220e-47	60.00	domain-containing protein n=2 Tax=Aphanomyces inva...	[more]
CULLIN_2	7.330e-47	56.79	domain-containing protein n=2 Tax=Monodopsidaceae ...	[more]
Hypothetical	1.960e-46	53.99	protein n=1 Tax=Rhizochromulina marina TaxID=10348...	[more]
CULLIN_2	2.070e-46	56.88	domain-containing protein n=1 Tax=Aphanomyces eute...	[more]
CULLIN_2	3.010e-46	56.79	domain-containing protein n=1 Tax=Aureococcus anop...	[more]
Cullin	7.700e-46	56.88	domain-containing protein n=1 Tax=Aphanomyces asta...	[more]
CULLIN_2	1.550e-45	55.63	domain-containing protein n=3 Tax=Saprolegniaceae ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7773	contig	E_fasciculatus_S2_contig7773:1765..7193 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	284.3
Seed ortholog evalue	4.4e-74
Seed eggNOG ortholog	2880.D7FT61
Preferred name	CUL3
Model size	887
KEGG ko	ko:K03869
KEGG Pathway	ko04120,ko04340,ko04341,map04120,map04340,map04341
KEGG Module	M00384
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000070,GO:0000082,GO:0000122,GO:0000151,GO:0000165,GO:0000209,GO:0000278,GO:0000280,GO:0000819,GO:0000902,GO:0000904,GO:0000922,GO:0001654,GO:0001701,GO:0001709,GO:0001745,GO:0001824,GO:0001825,GO:0001829,GO:0001831,GO:0001889,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005102,GO:0005112,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005794,GO:0005819,GO:0005827,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005929,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006513,GO:0006515,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006915,GO:0006919,GO:0006928,GO:0006950,GO:0006996,GO:0007010,GO:0007015,GO:0007049,GO:0007050,GO:0007059,GO:0007080,GO:0007088,GO:0007154,GO:0007165,GO:0007166,GO:0007229,GO:0007267,GO:0007275,GO:0007276,GO:0007277,GO:0007278,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007292,GO:0007346,GO:0007349,GO:0007369,GO:0007399,GO:0007409,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007610,GO:0007622,GO:0007623,GO:0007626,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0009056,GO:0009057,GO:0009314,GO:0009416,GO:0009628,GO:0009639,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009896,GO:0009909,GO:0009911,GO:0009966,GO:0009968,GO:0009987,GO:0009994,GO:0010033,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010646,GO:0010648,GO:0010927,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0010965,GO:0012501,GO:0012505,GO:0015630,GO:0016043,GO:0016050,GO:0016055,GO:0016192,GO:0016310,GO:0016358,GO:0016477,GO:0016567,GO:0016740,GO:0017145,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0019904,GO:0019941,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0022612,GO:0023014,GO:0023051,GO:0023052,GO:0023057,GO:0030029,GO:0030030,GO:0030036,GO:0030038,GO:0030071,GO:0030111,GO:0030154,GO:0030162,GO:0030163,GO:0030178,GO:0030182,GO:0030239,GO:0030332,GO:0030431,GO:0031032,GO:0031033,GO:0031034,GO:0031145,GO:0031175,GO:0031208,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031331,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031461,GO:0031463,GO:0031514,GO:0031625,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032436,GO:0032446,GO:0032465,GO:0032467,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033554,GO:0034622,GO:0035023,GO:0035024,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0035556,GO:0035966,GO:0035967,GO:0036126,GO:0036211,GO:0040011,GO:0040016,GO:0042127,GO:0042221,GO:0042692,GO:0042749,GO:0042752,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043009,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043149,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043280,GO:0043281,GO:0043412,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044346,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044843,GO:0045165,GO:0045187,GO:0045475,GO:0045732,GO:0045786,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045892,GO:0045931,GO:0045934,GO:0046578,GO:0046580,GO:0046907,GO:0046982,GO:0046983,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048511,GO:0048512,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048580,GO:0048582,GO:0048583,GO:0048585,GO:0048592,GO:0048598,GO:0048599,GO:0048609,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048732,GO:0048736,GO:0048737,GO:0048749,GO:0048812,GO:0048813,GO:0048831,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050000,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050896,GO:0051017,GO:0051056,GO:0051058,GO:0051094,GO:0051128,GO:0051130,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051276,GO:0051301,GO:0051302,GO:0051303,GO:0051310,GO:0051336,GO:0051345,GO:0051603,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051788,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0055001,GO:0055002,GO:0060255,GO:0060429,GO:0060562,GO:0060828,GO:0061008,GO:0061024,GO:0061061,GO:0061564,GO:0061572,GO:0061630,GO:0061659,GO:0062033,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0070887,GO:0070925,GO:0071218,GO:0071310,GO:0071630,GO:0071688,GO:0071704,GO:0071840,GO:0072576,GO:0080090,GO:0090068,GO:0090090,GO:0090114,GO:0090596,GO:0097190,GO:0097193,GO:0097223,GO:0097435,GO:0097729,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120036,GO:0120039,GO:0140014,GO:0140096,GO:0198738,GO:1901044,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902531,GO:1902532,GO:1902679,GO:1903047,GO:1903052,GO:1903320,GO:1903322,GO:1903364,GO:1903506,GO:1903507,GO:1905114,GO:1905818,GO:1905820,GO:1990234,GO:2000026,GO:2000112,GO:2000113,GO:2000116,GO:2000241,GO:2000243,GO:2001056,GO:2001141,GO:2001252
Exons	7
EggNOG free text desc.	ubiquitin protein ligase binding
EggNOG OGs	COG5647@1,KOG2166@2759
Cds size	579
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko03400,ko04121

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7773.15938.1	prot_E_fasciculatus_S2_contig7773.15938.1	Ectocarpus fasciculatus EfasUO2	polypeptide	E_fasciculatus_S2_contig7773 1777..5714 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1696842438.971086-UTR-E_fasciculatus_S2_contig7773:1764..1776	1696842438.971086-UTR-E_fasciculatus_S2_contig7773:1764..1776	Ectocarpus fasciculatus EfasUO2	UTR	E_fasciculatus_S2_contig7773 1765..1776 +
1696842439.0481644-UTR-E_fasciculatus_S2_contig7773:5714..5785	1696842439.0481644-UTR-E_fasciculatus_S2_contig7773:5714..5785	Ectocarpus fasciculatus EfasUO2	UTR	E_fasciculatus_S2_contig7773 5715..5785 +
1696842439.062562-UTR-E_fasciculatus_S2_contig7773:6378..6498	1696842439.062562-UTR-E_fasciculatus_S2_contig7773:6378..6498	Ectocarpus fasciculatus EfasUO2	UTR	E_fasciculatus_S2_contig7773 6379..6498 +
1696842439.0733502-UTR-E_fasciculatus_S2_contig7773:7088..7193	1696842439.0733502-UTR-E_fasciculatus_S2_contig7773:7088..7193	Ectocarpus fasciculatus EfasUO2	UTR	E_fasciculatus_S2_contig7773 7089..7193 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1696842438.9911788-CDS-E_fasciculatus_S2_contig7773:1776..1932	1696842438.9911788-CDS-E_fasciculatus_S2_contig7773:1776..1932	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig7773 1777..1932 +
1696842439.0028372-CDS-E_fasciculatus_S2_contig7773:3227..3392	1696842439.0028372-CDS-E_fasciculatus_S2_contig7773:3227..3392	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig7773 3228..3392 +
1696842439.0136163-CDS-E_fasciculatus_S2_contig7773:4182..4230	1696842439.0136163-CDS-E_fasciculatus_S2_contig7773:4182..4230	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig7773 4183..4230 +
1696842439.0236855-CDS-E_fasciculatus_S2_contig7773:4893..5054	1696842439.0236855-CDS-E_fasciculatus_S2_contig7773:4893..5054	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig7773 4894..5054 +
1696842439.0343502-CDS-E_fasciculatus_S2_contig7773:5665..5714	1696842439.0343502-CDS-E_fasciculatus_S2_contig7773:5665..5714	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig7773 5666..5714 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E_fasciculatus_S2_contig7773:1765..7193+
coding sequence from alignment at E_fasciculatus_S2_contig7773:1765..7193+

protein sequence of mRNA_E_fasciculatus_S2_contig7773.15938.1

>prot_E_fasciculatus_S2_contig7773.15938.1 ID=prot_E_fasciculatus_S2_contig7773.15938.1|Name=mRNA_E_fasciculatus_S2_contig7773.15938.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=193bp
MQMVRDILMYMNRTYVSFNKKMPVYETGLVVFRDTVARHDKVKGWLQSLL
LQNIADERPSRLIDRDLMETPLSMLSGLGVDEVAVYEEGLENNFLSTTRA
FYRAESQEFIARNTCPAYMKKAEDRLGEEAARSINYLASGTEPKLKHIVE
TELIYNHARFWWRWRTRGARRCSGTTRLRTFGGCTTCFLEYR*

mRNA from alignment at E_fasciculatus_S2_contig7773:1765..7193+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E_fasciculatus_S2_contig7773.15938.1 ID=mRNA_E_fasciculatus_S2_contig7773.15938.1|Name=mRNA_E_fasciculatus_S2_contig7773.15938.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5429bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7773:1765..7193+ (Ectocarpus fasciculatus EfasUO2)
AACCAGGAAACGATGCAGATGGTCCGCGACATCTTGATGTACATGAACCG
CACGTACGTGAGCTTCAACAAGAAGATGCCCGTCTACGAGACGGGTCTGG
TGGTGTTCAGGGACACGGTTGCACGGCACGATAAGGTCAAGGGCTGGCTG
CAGAGCTTGCTCCTACAGGTGTGTTTATTGGGCGTGTATTTGAGAATACC
TATTTTTAGGACAAGTTAGCCTGAATCGAAGTGTTGGGCTACTGTACGGA
CAGATGGAGTACTGGGTAGAAAGATCGGAACAGTTTTTAGTGTGAGGATA
ACAACAATAGTAACGCCGTCGTCCTTTTCGTTGTCGTTTGGTGCTCAACC
CCCCTCCACCCGGAAATCGGCCATTAGTGGCAGAAGGAACAGAGGTGCAG
AACCACTCCACAAATCCATAGATTTGAATTTTTCAGCCAGCAGACCGTAA
CGCTGACAATGTAGATACCCAAGGCGCCGGCAGCCCTTCCAATCTTTCTC
TGCAAAACGTTTATTTGGGAACGTACATGGCACCCTTTTCTTCACGCGTT
GAAAGTGGAAGGTGGGACACCAACAGAAAAGCTGGTGTGCACGTTCGTAG
CCGTCGTACTCATTTTGTTGCTGTAGTTTCTTTGCCCTTCGCGACGCGTG
CTGAAACATATTTTTGCGGAGCATCATGCTACCATGGCGTTTTTTCATAA
GTTGAAAATGGAAGGCAAGCACCGCAGGGCGAAGGTTGGACAACAACAGA
AAGTTCCTGTGCTGTCTTCCTCCTGTGCGAGGCCGGCTGGTACAGGCGTC
GAAACATACATCGGGGGGTGCTTGTGTGGGTAGACTTGGCGCCGGAATAG
AGGTGGCGAAACACTCGAAAGCCCAAGACAAGCCGCCTGTTGTTGGGGAT
GCAAACAGCTTTGCCCTCCGCGCGGACGACTGCCCTCCTGGATACACTTG
ACGGCCTTAGTTCGCGCTTTGGCGCGATGTGCCGACGCTGCCTAGAAGGC
GATCACCACGCAACTCTCGGTTGGCCCGGGCTATCTCCCCAGAGGAGGTG
CCAGTAGAGACTCATCTCCATTCTTCCTGTCCAACGGCGTCCCTCTATGT
ACCTCTCCCCTCCACCCTTACGTCCTCGAAAACAAGCAGCATCGCCTGCT
TACTCGGCCTGAGTCCCCAGATAGACGGCTGACAAAATACCGGAAAAAAT
CGGACCTCGCGGGTTGTAAATCCAAAAATACAAGAAAGACTACCGTACGC
GTTCTAGATGAATACATCGAAAGGCATGTGTTGAAAGTCTTAAGTCGTAA
CAGTGAGTGGGAATAAAATCAGCTGGATAGCTACACTACGCTACTGCCAT
GCCGAGAAAAGGGAGCTCCGTCCTCTCTTAGTGACCACCCCTCTCCCTAA
CTGTTTAAGTCACCCCCCTTTTTCGTCTGACCGACCGGCTTTCGGGCACA
CGCGCGCGCGCAGAACATCGCGGACGAGCGCCCCAGCCGCCTGATCGACC
GAGATCTCATGGAGACGCCGCTGTCCATGCTGAGCGGGCTAGGGGTGGAC
GAGGTTGCGGTGTACGAGGAGGGCCTCGAGAACAACTTCTTGTCCACGAC
GAGAGCCTTCTACCGGGCCGAGAGCCAGGTGCCCGGTTGAAGTTGCGGGG
AAATACAGTACAGTAGCTTTGCGGGGGAAATACCGTAGCCTTGAGAAGTA
TTTGTTTTGCAGGGGCAATAAAGTCCACCCACGAAGCGAGCCTTCTACCG
GGCCGAGAGCCAGGTGCCAGGTTGAAGTTGCGGGGCAATACAGTAGCGTT
GCGGGGGAAATGCCGTAGCATTGAGGAGTACTTGTTTTGCAGGGGCAATT
TGGTCCACCCACGAAGCGAGCCTTCCTCCGGGCCTAGAACCAGGTGCCCG
GTTGCGGGGCATTAGCGTTGAGGGGCAATACTGCTGCAGGGGCAATATAG
GTCTGAGGGGTAATGGTGCTGTGCAGGTTGCGAGAAGTCCGGGGGGGGGT
AGTTTGAGTAATATGACACCATCGGCAACATGAGAAGCGAGGTTAGCAGG
AAGGTGAACGCCCTTGGGAATCGACCATTTTTGAGAGTTTTGGCTGAGTC
CATCCCATGTCCGCCGTGTGACGCGCACATGTGTGCACGCAAGATCTTTG
CAGGCAGAGTGGCGACAACTGTTGACTTCTAGGGTTGAGTGATCGGGGGG
ATGGACACCACGCCTCTTTGTTTGCACAAAAGACGGGCGCACGCACACCC
TCGCGCGCTTGCGCTGGCGCCCCCTCCCGCACGCGGTCGTTCTCCCCGGC
CGCCGACCGACTTCGCGTCGTTCGTTGACCCTCGCTACTGATGCTTCCGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTGCCATGTTGT
CACGTGGGGAATGGACAGGAGTTCATCGCCCGAAATACTTGCCCGGCCTA
CATGAAGAAGGCAGAGGTGAGTGCCGGTGGGGCACGCCCAAGCAACAGCG
ACAGCAACAGCCCGCGCCGAGAACGGCATTTTCCTGCTGCGACTCGAAAA
GAGCACGCGACATTTTGTATCTCGCGTGTCGAGTTAGTTCACCGGGGGTA
CGCTGTTGGGTGCTTGTTTCGTTTTTTTGTCTTTTTCTCGAGCCTGGCCG
TCTTTCGCCGTCCTCCTGCGTCAATTGAAAAGACCTAGACCTGTTTTGCT
GGTGGCTTCAGTGTACACTCCAGTACAGCGGTAGGCCCTCCGTAAGGCGG
GTATGCGCCAGACTGACTCACTCGGCACCCGCCTTATTCACTGTGTATAA
CAAGTTGATTAGATTATTCCGTCTGTGCCAGCCAATTTTACCCGCCTTGC
TCAGGACACCCGCCTCATAGACGGCCTACGACTGTAGTAGGAGACGCCTC
CCTGATTGTTTTTTGGTCAGAGCTTCTTTTTTTTTCCGGCTGTCATCGTC
GAGGCCCTGGATTTGTTTTTTTGCGAGAAGACGCCAGCCCCAGCGGCAGC
AGCAGCGACAGCAGCAGCAGCAACAACAACAACAACATTGCGCACACCCC
ATTACCGTCGTCTGATGTACGACCTATCTCGTTGTGCTGAGCGTGAACGT
CAAACCTATGCCGAACGAACGTCTTCCAGGATCGCCTTGGGGAGGAGGCG
GCGAGGAGCATCAACTACCTGGCCTCCGGCACCGAGCCCAAGCTCAAGCA
CATCGTGGAGACGGAGCTGATCTACAACCACGCCAGGTTTTGGTGGAGAT
GGAGAACTCGGGGTGCACGTCGATGTTCAGGAACGACAAGGTGGGGGGCG
GCCCCGTGGCTGGCTTTGGGGGAGGGGGGGGGGGCAAGGTTTTGCTNNNN
NNNGGGGGGGGGTGGGGAGGGAGGGGAAGGGGGGGGGGGGGGGGGGCGGG
GGGGGGGGGGGGGGGGGGAGGGGGGGGGGGCGCAACGTTTTGCTCACCGC
GGCCTTGAGCATGGACAAGTAGCCAGTGATACCCCCCCCCGCTGGAACAA
TATTTAAAGCTCGATCGACGAGAGGGACGCCAAAATCAAGTGACAGGTGT
TGGCATGTGTTTCGTACAACCGCCTTATCTTCGGGTGTTGTTGCGGCTGC
CCTACTTGCCGCTGCTCCTGCTCCTACCGCTGCCGCTGTTGCTGCTGCCG
TTTTGGCTCTCCCAACTTCGGCGGTAGGGTGTGTTGCGCCTCACTATTCT
TCTATGTGACTCTTCATTCCGTCTACGTATGAGTGTCCCACCTACTGTAT
GTGTGGCTTGCCTCACCTGCTTGTGACTATCCCGCCTCTGACTATCTCCT
ATCTTTGACGGTCTCACCTATTATATATGTCTTATCTTCTGCGCGATTGT
CTCACCCCTATGCGTGACTATCCCGCCTATGTGTGACTGCCTATGCGCTA
GATTGAGGACCTTTGGCGGATGCACGACCTGTTTTCTCGAGTACCGGTGA
CCCTGGACGAGCTGCGGAGGTCCATGTGCAAGTATGTTCAGGCTACCGGG
AAGGCGCTCGTGACAGATCTGGTGCGGGTTATCATTTTGGTTCTGGCGAC
GAGTCTTGTGACGTATGGAGAGGTTCGGGACGATGCAACAGGCGCAGTAG
TAGCCAATGACGGCGGTGCCTTCTCATCAGTGTACTTCGCTCGTTGTTGA
TCGCGTGTGCTCTGGAGCTCTAGTCAAAAGAGGTGTTGCGTATGTCATGG
CTGGAATAATAATTTAGTGATGCGCTGGCTCTTTTACGACACGCACCGGG
TCATGGCCGCTAAAGAGCGACACACACGACCACGTTGGATGACTTCACTG
TAAGCATAGTTTAGTGATCCGTTGGATCTTTTCGGACACACACACCTGCT
CATGCCCGCCCGAAAACGACCCACGCAACCCACGCGGTATGCCTCGTGTG
TTGGATGCGATCCGTTTCCTCTTTTTGGAGACTCACCGCCGAATATCTCG
ACGCTCACAACCCACCTCACATGCCTTGTTTTTTGGATGATGCCATTTAG
TGATGCGTTGCCTCTTTTGAAGAAAAATACGAATACAATTTTGGACACAC
ACCGCCAAATAACTCGACATACGCGCAAACGTACGCTGTACGTCCGTGCT
TGTGACGCCCCCAGGAAAGCGCGAAGGACCCCGTAGCCTTCGTCCAAGGG
CTGCTGTCCTTGAGAGGCAAGTACGACTCCATCGTCAACGACGCCTTCAG
AGGGGAGAAGCGGTCTCAGAAGCGGCTAAAGGAGGTAGGTGACTCAACCG
AGTCTGAGCATAGGCAGCAGATGCGTGCGCTTGCTGTAACGACTAGTGCA
TGCTCGTATTGTTGTGGTTGGTTGTTGAACTAGGGTTGCTGTTGGTGGTG
GCCGCCACGTGTTGTGATTGCTCTTGGTGGTTGTTGAAGATGAAGATTTG
CTGTTGTCAGTGGTCGCTCCATGTTGTGATTGTTGTTGGTTGTTGGTTGT
TGAAGTTGAAAGCTGCTGTTGCTATTTAGGGATGGTTGATGCTGCGCTTT
CATGCGCAGTGTTGCAGGCAGAAGGCGTCACGTTTTCTTTTCTTTTTTCG
TGGAGCATTCGCTCCTTCTAGGCATGCATAGGACACGTGTGGGCATAAGA
AAACATGCTGGTGAACTTGAAAAACGTCCAGGCCACGCGTTAAGGCTGAC
GTATCGCGATTCGTACTTGGTGCTTCCGAAGGAGTGCACACGGCGCTGCT
GTATCTCCCCCGCCCCTGCGCTACCGAAGTTTGTTGGAGGCTGTCGAGGA
CGTTCGACCGCGACCCCCCCCCCCCCCTGATTGGTGTTGACTGCTGTGCC
CCTCGATGTCTCTCTATTTTGCAGGCGTTCGAGGACTTCATCAACACAGA
CTCCCGGTGCGCGTCGTACCTGGCGACGTACATCGATGACCTCCTCAAGT
CGGGCCTGAGAGGGATGGCAGAGGACCAG

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7773:1765..7193+

>mRNA_E_fasciculatus_S2_contig7773.15938.1 ID=mRNA_E_fasciculatus_S2_contig7773.15938.1|Name=mRNA_E_fasciculatus_S2_contig7773.15938.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=579bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7773:1765..7193+ (Ectocarpus fasciculatus EfasUO2)
ATGCAGATGGTCCGCGACATCTTGATGTACATGAACCGCACGTACGTGAG
CTTCAACAAGAAGATGCCCGTCTACGAGACGGGTCTGGTGGTGTTCAGGG
ACACGGTTGCACGGCACGATAAGGTCAAGGGCTGGCTGCAGAGCTTGCTC
CTACAGAACATCGCGGACGAGCGCCCCAGCCGCCTGATCGACCGAGATCT
CATGGAGACGCCGCTGTCCATGCTGAGCGGGCTAGGGGTGGACGAGGTTG
CGGTGTACGAGGAGGGCCTCGAGAACAACTTCTTGTCCACGACGAGAGCC
TTCTACCGGGCCGAGAGCCAGGAGTTCATCGCCCGAAATACTTGCCCGGC
CTACATGAAGAAGGCAGAGGATCGCCTTGGGGAGGAGGCGGCGAGGAGCA
TCAACTACCTGGCCTCCGGCACCGAGCCCAAGCTCAAGCACATCGTGGAG
ACGGAGCTGATCTACAACCACGCCAGGTTTTGGTGGAGATGGAGAACTCG
GGGTGCACGTCGATGTTCAGGAACGACAAGATTGAGGACCTTTGGCGGAT
GCACGACCTGTTTTCTCGAGTACCGGTGA