mRNA_E_fasciculatus_S2_contig777.15935.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig777.15935.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI) HSP 1 Score: 372 bits (955), Expect = 8.680e-129 Identity = 194/234 (82.91%), Postives = 209/234 (89.32%), Query Frame = 1
Query: 1 MISVCWAGENLATFIKTLKFFELFASNMLAITNLAICVNLSLVVMSCRTQSHVRSISTHKLVLLFLALSAGIAALAVPLWGSTLLSGTGFWEAGKDERDHQLVVISTFMVEFLVGICMLAIVSWLLLFRMTEIKECWKMHACLRYYFGLTLLGTVGNLALGVCGTIYVVGDMTRPLLIVVSWGFRQVRIALDTIVLHSVLATKSVDERAESPPSDAASSFSPTSPRGGSRKSRR 702
MISVCWAGENLATFIKTLKF ELFASNMLAITNLAICVNLSL+VMS R QSHV+SISTHKLVLLFLALSAG+AA+AVP WG T+LSGTGFWE G+++RDH+ V+ISTFMVEFLVGICM IVSWLLLFRMTEIKECW MHACLRYYFGLTLLGTVGNL LGVCGTIYV+ DM PLL++ SWGFRQVRIALDTIVLHSVLATKSVDERAE+PP+D AS P P SR SRR
Sbjct: 1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERAETPPTDGAS---PAPPPASSRGSRR 231
BLAST of mRNA_E_fasciculatus_S2_contig777.15935.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI) HSP 1 Score: 244 bits (622), Expect = 2.400e-77 Identity = 132/237 (55.70%), Postives = 167/237 (70.46%), Query Frame = 1
Query: 1 MISVCWAGENLATFIKTLKFFELFASNMLAITNLAICVNLSLVVMSCRTQSHVRSISTHKLVLLFLALSAGIAALAVPLWGSTLLSGTGFWEAGKDERDHQLVVISTFMVEFLVGICMLAIVSWLLLFRMTEIKECWKMHACLRYYFGLTLLGTVGNLALGVCGTIYVVGDMTRPLLIVVSWGFRQVRIALDTIVLHSVLATKSVDERAESPPSD----AASSFSPTSPRGGSRKSR 699
M+ VCWAG N+ F+K LKF EL ASNMLAITNLAIC NL+LV+MS RT + V+S S+ LV L LA+S +A A P W +T++SGTGF +D+R + +S F +EFLVGICM IV+WLLLFR+ E+KECWK+HA +RYYFGLTL+GT NLALGVCGTIYVVG + LLIV++W FR + IALDT VL+ VL + E P + AA++ ++PRG S SR
Sbjct: 1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVLGVPAATGHDEGPDAQRRCSAAAAAPGSNPRGCSSCSR 237
BLAST of mRNA_E_fasciculatus_S2_contig777.15935.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI) HSP 1 Score: 226 bits (576), Expect = 1.030e-70 Identity = 114/172 (66.28%), Postives = 137/172 (79.65%), Query Frame = 1
Query: 1 MISVCWAGENLATFIKTLKFFELFASNMLAITNLAICVNLSLVVMSCRTQSHVRSISTHKLVLLFLALSAGIAALAVPLWGSTLLSGTGFWEAGKDERDHQLVVISTFMVEFLVGICMLAIVSWLLLFRMTEIKECWKMHACLRYYFGLTLLGTVGNLALGVCGTIYVVGDM 516
M+SVCWAG++L IKTLKFFEL ASNMLAITNLAICVNL+L+VMS RT S VRS ST L+L+FLALS G+AA++VP W ++SGT FW ++ H +V++ F VEF VGICML IV WL++FR TEIK+ WKMHA +RYYFGLTL+ T NLALG+CGTIYVVGDM
Sbjct: 99 MVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGDM 270
BLAST of mRNA_E_fasciculatus_S2_contig777.15935.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI) HSP 1 Score: 224 bits (572), Expect = 2.210e-69 Identity = 109/208 (52.40%), Postives = 150/208 (72.12%), Query Frame = 1
Query: 1 MISVCWAGENLATFIKTLKFFELFASNMLAITNLAICVNLSLVVMSCRTQSHVRSISTHKLVLLFLALSAGIAALAVPLWGSTLLSGTGFWEAGKDERDHQLVVISTFMVEFLVGICMLAIVSWLLLFRMTEIKECWKMHACLRYYFGLTLLGTVGNLALGVCGTIYVVGDMTRPLLIVVSWGFRQVRIALDTIVLHSVLATKSVDER 624
M++VCW +L FIK +KF E +SNM+AIT+LAICVNL+L+V S RT + V+S+S+ L+ L LA+S GI ++ VPLW + + GTGFW D+ + VV+S F +EF+VGICM I++WLLLFRM E+KECW++ A +RYYF LTLLGT N+ +G+C T++V+GDM P L + SW R + +ALDT VL+ VL K +DER
Sbjct: 73 MVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLREKDMDER 280
BLAST of mRNA_E_fasciculatus_S2_contig777.15935.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE) HSP 1 Score: 222 bits (566), Expect = 4.300e-69 Identity = 116/207 (56.04%), Postives = 145/207 (70.05%), Query Frame = 1
Query: 1 MISVCWAGENLATFIKTLKFFELFASNMLAITNLAICVNLSLVVMSCRTQSHVRSISTHKLVLLFLALSAGIAALAVPLWGSTLLSGTGFWEAGKDERDHQLVVISTFMVEFLVGICMLAIVSWLLLFRMTEIKECWKMHACLRYYFGLTLLGTVGNLALGVCGTIYVVGDMTRPLLIVVSWGFRQVRIALDTIVLHSVLATKSVDE 621
MISVCW GE L FIK LK+ E +SNMLAITNLAIC+NL+LVV S RT S V S+ST LVLLFLA+S AA +VP W T++SGT FW D+ +++S ++EF+VGICM IVSWL+ FRM IKECWK+HA +RYYF LT++GT NLALG+ G YV L+ ++W FR +ALDTIVL+ VL T+ +DE
Sbjct: 8 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMDE 214
BLAST of mRNA_E_fasciculatus_S2_contig777.15935.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI) HSP 1 Score: 220 bits (561), Expect = 2.530e-68 Identity = 107/208 (51.44%), Postives = 153/208 (73.56%), Query Frame = 1
Query: 1 MISVCWAGENLATFIKTLKFFELFASNMLAITNLAICVNLSLVVMSCRTQSHVRSISTHKLVLLFLALSAGIAALAVPLWGSTLLSGTGFWEAGKDERDHQLVVISTFMVEFLVGICMLAIVSWLLLFRMTEIKECWKMHACLRYYFGLTLLGTVGNLALGVCGTIYVVGDMTRPLLIVVSWGFRQVRIALDTIVLHSVLATKSVDER 624
M++VCWAG+NL IKT+KF EL +S+MLA+T+LAICVNL+L+V S RT V+S+S+ L+ L LA+S G+ A VPLW + ++ GT FW D+ + VV+S F +EF+VG+CM IV+WLLLFR+ E+KECW++HA +RYY LT+LGT +L++G+C T++V+G + + L + +W FR + IALDT VL+ VL K +DER
Sbjct: 24 MVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDER 231
BLAST of mRNA_E_fasciculatus_S2_contig777.15935.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE) HSP 1 Score: 216 bits (551), Expect = 8.200e-67 Identity = 106/210 (50.48%), Postives = 146/210 (69.52%), Query Frame = 1
Query: 1 MISVCWAGENLATFIKTLKFFELFASNMLAITNLAICVNLSLVVMSCRTQSHVRSISTHKLVLLFLALSAGIAALAVPLWGSTLLSGTGFWEAGKDERDHQLVVISTFMVEFLVGICMLAIVSWLLLFRMTEIKECWKMHACLRYYFGLTLLGTVGNLALGVCGTIYVVGDMTRPLLIVVSWGFRQVRIALDTIVLHSVLATKSVDERAE 630
M+S C+A NL IKT+ F + +SNMLA TNL IC+NL+L+V S RT + V+++S+ +++ + L +SA +AA VPLW +T++ GT FW D + +++S +++EFLVGICML IV WL +FRMTEIKECW+ H+ +RYYF LTL GT NL LG+CG YV GD PL + SW FR + I+ DT+VL+ L S+DERAE
Sbjct: 23 MVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGSIDERAE 232
BLAST of mRNA_E_fasciculatus_S2_contig777.15935.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE) HSP 1 Score: 200 bits (508), Expect = 1.060e-61 Identity = 104/174 (59.77%), Postives = 133/174 (76.44%), Query Frame = 1
Query: 1 MISVCWAGENLATFIKTLKFFELFASNMLAITNLAICVNLSLVVMSCRTQSHVRSISTHKLVLLFLALSAGIAALAVPLWGSTLLSGTGFWEAGKDERDHQLVVISTFMVEFLVGICMLAIVSWLLLFRMTEIKECWKMHACLRYYFGLTLLGTVGNLALGVCGTIYVVGDMTR 522
MISVCWAG NL+ IK LKF EL ++NMLA+TNLAICVNL+LVVMS RT S V S+S+ +++ L L L+ G AA AVP W + +L+GT F +D++D V+S F+ EF+VGICM+AIV+WLLLFRM EIKECWK+H +RYYFGLTL+ T NL LG+ GT+Y+VG+ R
Sbjct: 1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIVGEGQR 174
BLAST of mRNA_E_fasciculatus_S2_contig777.15935.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI) HSP 1 Score: 194 bits (493), Expect = 1.980e-59 Identity = 102/172 (59.30%), Postives = 125/172 (72.67%), Query Frame = 1
Query: 1 MISVCWAGENLATFIKTLKFFELFASNMLAITNLAICVNLSLVVMSCRTQSH-VRSISTHKLVLLFLALSAGIAALAVPLWGSTLLSGTGFWEAGKDERDHQLVVISTFMVEFLVGICMLAIVSWLLLFRMTEIKECWKMHACLRYYFGLTLLGTVGNLALGVCGTIYVVGD 513
MISVCW G NL IKT KF EL + NMLA+TNLAIC+NL+LVVMS Q V S+S+ L+++ L +S G AA A P W +LSGTGF+ +++R + IS F +EF VGICM IV+WLLLFRMTEIKECWKMHA +RYYFGLTL+ T NL LG+CG IY++GD
Sbjct: 5 MISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIYLIGD 176
BLAST of mRNA_E_fasciculatus_S2_contig777.15935.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI) HSP 1 Score: 194 bits (492), Expect = 2.400e-59 Identity = 101/171 (59.06%), Postives = 123/171 (71.93%), Query Frame = 1
Query: 1 MISVCWAGENLATFIKTLKFFELFASNMLAITNLAICVNLSLVVMSCRTQSHVRSISTHKLVLLFLALSAGIAALAVPLWGSTLLSGTGFWEAGKDERDHQLVVISTFMVEFLVGICMLAIVSWLLLFRMTEIKECWKMHACLRYYFGLTLLGTVGNLALGVCGTIYVVGD 513
MISVCW GE L FIK LK+ E +SNMLAITNLAIC+NL+LVV S RT S V+S+ST LVLLFLA+S AA +VP W T++SGT FW D+ +++S ++EF+VGICM IVSWL+ FRM IKECWK+HA +RYYF LTL+ T NLALG+ G YV D
Sbjct: 1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYVFRD 171 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig777.15935.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig777.15935.1 >prot_E_fasciculatus_S2_contig777.15935.1 ID=prot_E_fasciculatus_S2_contig777.15935.1|Name=mRNA_E_fasciculatus_S2_contig777.15935.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=234bp MISVCWAGENLATFIKTLKFFELFASNMLAITNLAICVNLSLVVMSCRTQback to top mRNA from alignment at E_fasciculatus_S2_contig777:22287..24946+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig777.15935.1 ID=mRNA_E_fasciculatus_S2_contig777.15935.1|Name=mRNA_E_fasciculatus_S2_contig777.15935.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2660bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig777:22287..24946+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig777:22287..24946+ >mRNA_E_fasciculatus_S2_contig777.15935.1 ID=mRNA_E_fasciculatus_S2_contig777.15935.1|Name=mRNA_E_fasciculatus_S2_contig777.15935.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=702bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig777:22287..24946+ (Ectocarpus fasciculatus EfasUO2)back to top |