mRNA_E_fasciculatus_S2_contig7765.15929.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7765.15929.1
Unique NamemRNA_E_fasciculatus_S2_contig7765.15929.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7765.15929.1 vs.
Match: Guanylate-binding (protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ2_ECTSI)

HSP 1 Score: 639 bits (1648), Expect = 1.780e-217
Identity = 418/576 (72.57%), Postives = 465/576 (80.73%), Query Frame = 1
Query:    1 PPRNYNNSEAYRGDVKKAVDLIVPKCAPKELGGKAMDGAALATFLLKLTRVMNVPVAAGDGRLSAFLDVLEAGELQAAEGAYRVEWERGDNNHEGVPPGAEDLKAKHSECVKRAELVANPRSSSSXXXXXXXXXXXXXXQDGEPAAASDGRPLRRAGFVEDLRGVLNGLYRDYCLTNARLWSDAEIAGANEDLEALLREKQEQQRAGSXXXXXXXXXXXXXXXXEYSRVTAVFESRSQRWNVNVVPDIIGSHPDMEALLIVGGGDST-PRTGELTTGHIEALWRAVDSFLEQRVATATKQASDAFEDGMDDLFAKVRDLPQPPHLADVEFLSNSAHAAAWDAYHAVELAVGGDKAKEVAAAQGWAGQAETAAGTWMAQAQEAVRGADTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----------DEAVALAERVLKERHSPCVEKVTLKTNHVDKSLAKCRKIADEEWALGREESGKPELVEEWKPTVLDKAMDKKESEHANNLVKVASAAIADRFHDMSVKFELPEPDQVIDRLFDSLVDQLQK 1695
            P R  + S+AYRG VK AVDLIVP+CAPKELGGK MDG ALATFL KLTRVMNVPV AG+ R S  LDVLE GELQAAE AYR EWE G+NN+EG+P GAE+LKAKHS+CV+RAELVA+PRS+SS              QDG+   ASDGR LRR GFV+ L  VL+GLYR+YC+ N RLWSDAEI GANEDL ALL+EKQEQQR+G    XXXXXXXXXXXX EYS VTAVF+SRSQRWN ++VPDII SH DMEALL+V G DS  P TGELT GH  ALWR VDSFLE+ +A AT+QA +AFED MD+L A+VRDLP+PPHLADVE LS+ A  AA DAY AV+LAVG DKA E A AQGWAGQAE A G WM++AQ+AVRGA   G XXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXG          DEAVALAERVLKERH+PCVEKVTLKTNHV+KSLAKCRKIA+EEWA GREES K EL++E KPTVLDKAMD+KESEHAN+LV  ASAA+A RF DMS++ ELPEPDQVIDRLF +L DQL+K
Sbjct:  330 PMRYSDLSDAYRGGVKTAVDLIVPECAPKELGGKTMDGTALATFLRKLTRVMNVPVTAGNDRFSTLLDVLEGGELQAAEVAYRAEWEPGENNYEGLPTGAENLKAKHSKCVERAELVADPRSASSSSSGTGGVAG----QDGDQEGASDGRSLRRPGFVQALHAVLSGLYREYCIANVRLWSDAEIFGANEDLGALLKEKQEQQRSGPGEQXXXXXXXXXXXX-EYSHVTAVFDSRSQRWNGDIVPDIISSHADMEALLVVRGDDSAMPPTGELTAGHTGALWRVVDSFLEKSLAIATQQAQEAFEDQMDNLDAEVRDLPRPPHLADVEMLSSKAKTAALDAYLAVKLAVGDDKATETAIAQGWAGQAEAATGRWMSEAQQAVRGAGNDGDXXXXXXXXXXXXAGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXGGDGGDGGVGVDEAVALAERVLKERHAPCVEKVTLKTNHVEKSLAKCRKIANEEWAQGREESDKQELLDERKPTVLDKAMDEKESEHANSLVDAASAALAGRFRDMSLELELPEPDQVIDRLFGTLSDQLRK 900          
BLAST of mRNA_E_fasciculatus_S2_contig7765.15929.1 vs.
Match: GBP (domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2D9_9PHAE)

HSP 1 Score: 625 bits (1612), Expect = 2.040e-210
Identity = 414/563 (73.53%), Postives = 456/563 (80.99%), Query Frame = 1
Query:   22 SEAYRGDVKKAVDLIVPKCAPKELGGKAMDGAALATFLLKLTRVMNVPVAAGDGRLSAFLDVLEAGELQAAEGAYRVEWERGDNNHEGVPPGAEDLKAKHSECVKRAELVANPRSSSSXXXXXXXXXXXXXXQDGEPAAASDGRPLRRAGFVEDLRGVLNGLYRDYCLTNARLWSDAEIAGANEDLEALLREKQEQQRAGSXXXXXXXXXXXXXXXXEYSRVTAVFESRSQRWNVNVVPDIIGSHPDMEALLIVGGGDS-TPRTGELTTGHIEALWRAVDSFLEQRVATATKQA----SDAFEDGMDDLFAKVRDLPQPPHLADVEFLSNSAHAAAWDAYHAVELAVGGDKAKEVAAAQGWAGQAETAAGTWMAQAQEAVRGADTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEAVALAERVLKERHSPCVEKVTLKTNHVDKSLAKCRKIADEEWALGREESGKPELVEEWKPTVLDKAMDKKESEHANNLVKVASAAIADRFHDMSVKFELPEPDQVIDRLFDSLVDQLQK 1695
            S+AYRGDVK AVD+IVP+CAPKELGGK MDG ALATFL KLTRVMNVPV AG+ R S  LDVLEAGEL+AAE AYR EWERG+NN+EG+P GAE+LKA+H+E V+RAELVA+PRSSS XXXXXXXXX     QDG+ A ASD R LRR GFV+ L  VL GLY +YCLTN RLWSDAEI GANEDL AL REKQEQQR+G XXXXXXXXXXXXXXX EYS V AVFE R QRWN ++VPDII SHPDMEALL+V G DS TPRTGELT  HIEALWR VDSFLEQ +ATAT+QA     +AFED MDDL A+VRDLP PPHLADV+ LS+ A+  A DAY  V+LAVG DKAKE A AQGWAGQAE A   W+ +A EAVR A   G    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 AVALAERVLKERH+PCVEKVTLKTNHV+KSLAKCRKIADEEWA GREES K EL++E KPTVLDKAMD+KESEHAN+LV +ASAA+  RFHDMS++ ELPEPDQVIDRLF +L +QLQK
Sbjct:  340 SDAYRGDVKAAVDVIVPECAPKELGGKTMDGTALATFLRKLTRVMNVPVVAGNDRFSTLLDVLEAGELRAAEAAYRAEWERGENNYEGLPTGAENLKARHNEYVRRAELVADPRSSSXXXXXXXXXXG----QDGDQAGASDVRSLRRPGFVQALHTVLRGLYWEYCLTNVRLWSDAEIFGANEDLGALRREKQEQQRSGXXXXXXXXXXXXXXXX-EYSHVKAVFERRRQRWNGDIVPDIISSHPDMEALLVVMGDDSATPRTGELTAVHIEALWRVVDSFLEQSLATATQQAIHSAQEAFEDRMDDLDAEVRDLPMPPHLADVDMLSSKANTTALDAYLVVKLAVGDDKAKETAIAQGWAGQAEAATRRWIMEAHEAVRRAGNDGGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------AVALAERVLKERHAPCVEKVTLKTNHVEKSLAKCRKIADEEWAQGREESDKQELLDERKPTVLDKAMDEKESEHANSLVDMASAALTGRFHDMSLELELPEPDQVIDRLFVTLSEQLQK 880          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7765.15929.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Guanylate-binding1.780e-21772.57protein, putative n=1 Tax=Ectocarpus siliculosus T... [more]
GBP2.040e-21073.53domain-containing protein (Fragment) n=1 Tax=Ectoc... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7765contigE_fasciculatus_S2_contig7765:93..6780 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score639.8
Seed ortholog evalue1.2e-180
Seed eggNOG ortholog2880.D7FNQ2
Model size1695
KEGG koko:K20899
KEGG Pathwayko04621,map04621
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.GTPase activity
EggNOG OGsKOG2037@1,KOG2037@2759
Cds size1695
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7765.15929.1prot_E_fasciculatus_S2_contig7765.15929.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7765 93..6780 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842438.1103582-CDS-E_fasciculatus_S2_contig7765:92..2421696842438.1103582-CDS-E_fasciculatus_S2_contig7765:92..242Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7765 93..242 +
1696842438.1238925-CDS-E_fasciculatus_S2_contig7765:686..8361696842438.1238925-CDS-E_fasciculatus_S2_contig7765:686..836Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7765 687..836 +
1696842438.1374178-CDS-E_fasciculatus_S2_contig7765:1719..19321696842438.1374178-CDS-E_fasciculatus_S2_contig7765:1719..1932Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7765 1720..1932 +
1696842438.1533296-CDS-E_fasciculatus_S2_contig7765:2464..25241696842438.1533296-CDS-E_fasciculatus_S2_contig7765:2464..2524Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7765 2465..2524 +
1696842438.172361-CDS-E_fasciculatus_S2_contig7765:3509..36521696842438.172361-CDS-E_fasciculatus_S2_contig7765:3509..3652Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7765 3510..3652 +
1696842438.1859145-CDS-E_fasciculatus_S2_contig7765:4314..45011696842438.1859145-CDS-E_fasciculatus_S2_contig7765:4314..4501Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7765 4315..4501 +
1696842438.1977022-CDS-E_fasciculatus_S2_contig7765:5090..57551696842438.1977022-CDS-E_fasciculatus_S2_contig7765:5090..5755Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7765 5091..5755 +
1696842438.2084007-CDS-E_fasciculatus_S2_contig7765:6653..67801696842438.2084007-CDS-E_fasciculatus_S2_contig7765:6653..6780Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7765 6654..6780 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7765.15929.1

>prot_E_fasciculatus_S2_contig7765.15929.1 ID=prot_E_fasciculatus_S2_contig7765.15929.1|Name=mRNA_E_fasciculatus_S2_contig7765.15929.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=565bp
PPRNYNNSEAYRGDVKKAVDLIVPKCAPKELGGKAMDGAALATFLLKLTR
VMNVPVAAGDGRLSAFLDVLEAGELQAAEGAYRVEWERGDNNHEGVPPGA
EDLKAKHSECVKRAELVANPRSSSSSSSPGDEGDEGGAGQDGEPAAASDG
RPLRRAGFVEDLRGVLNGLYRDYCLTNARLWSDAEIAGANEDLEALLREK
QEQQRAGSGEKGDGDPELPPPPPPEYSRVTAVFESRSQRWNVNVVPDIIG
SHPDMEALLIVGGGDSTPRTGELTTGHIEALWRAVDSFLEQRVATATKQA
SDAFEDGMDDLFAKVRDLPQPPHLADVEFLSNSAHAAAWDAYHAVELAVG
GDKAKEVAAAQGWAGQAETAAGTWMAQAQEAVRGADTGGGGGDAGGKGAG
AGDGGGAGNGGGGGGSGDDGKAAAAADGGGGGGGGGGGDGGAGGDEAVAL
AERVLKERHSPCVEKVTLKTNHVDKSLAKCRKIADEEWALGREESGKPEL
VEEWKPTVLDKAMDKKESEHANNLVKVASAAIADRFHDMSVKFELPEPDQ
VIDRLFDSLVDQLQK
back to top

mRNA from alignment at E_fasciculatus_S2_contig7765:93..6780+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7765.15929.1 ID=mRNA_E_fasciculatus_S2_contig7765.15929.1|Name=mRNA_E_fasciculatus_S2_contig7765.15929.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6688bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7765:93..6780+ (Ectocarpus fasciculatus EfasUO2)
CCTCCTCGTAACTACAACAACAGCGAGGCTTACCGGGGGGACGTGAAGAA AGCGGTGGACCTCATCGTGCCGAAGTGCGCCCCGAAGGAGCTTGGCGGGA AGGCGATGGACGGCGCCGCTCTGGCAACGTTTTTGCTCAAACTGACGCGG GTACGTGCTTTCTACGACACTCGTTGTGTCCGACACAGACAACCGACAGC AACATGCCTACCCCAATCTATCCTGTGACGGATGGCAGGCAGGTGTACTG GAAGCGTAAAACCCATGCGCGGGCGCATTAGAAAGTATACTGCTGTAGGA AGAACCGATCCTACAGCCGATCAGAGAACGTGGTAATTCGAGACGTTGTC CTGTCCATATTTTCTTTCTTTGCTTTCCCAAACTGCTTTTGGGTCAGGCA AGGCTAGCCTGTTTTGCACAAGGGGAGCTATCGGGAGCCGTTCAATTTGA TAAATTCTCCACACCCACCTCACCCCGGTAGTGTTCTGTCGGCTACTCCT TGTGCTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCTGCTGCTGCTGCTGC TGCTACTGCTGCTGACTGTTTTGTCACTGCTGCTACCGCTGCAGGTGATG AACGTCCCCGTGGCTGCTGGCGACGGCCGTTTGTCGGCGTTCTTGGACGT GCTAGAAGCGGGAGAGCTGCAAGCCGCCGAGGGCGCGTACAGGGTTGAAT GGGAGCGTGGCGATAACAACCACGAAGGCGTGCCACCCGGAGCGGTGCGT GCCACATGGCAGACAAGACGTTGGGGGGTGATGTTTCCTGTTTTTTATAG AATTAATACAAATACAAACACAGAAAGACTACCCGTTCGAGAAATAGCCA CAATCGAAAGGGATGTGTTGAAGTCTTTGCAATGAATGGCAAGACACCGA CTGGGTACTGGGCTTATTTTGAGTCTGTTTTAAGCCTATACACTGATGAT TTGTATTATTATCAGTGATACCAGTAGGTGCTAAGTACAACAGCGCAAAA AAACAAACTGTTTTTGAAGGCCATTCAACCTAAATATCATGTATGGCTCA TCGTATAAAACGTGTTTGCGTTTTTTTTACTGGCATCAGGGTGTTATGTC TTGCTGACATTTCCAGCGTTGTGTACAGGTGGGTGCTGCTGTTCGTTGGT AGTTGTCTCTGTTGGCGTCTCGATTTCTACATGTCACGGATGGTGGTTGT TTGGTCTTAAAACGGGGGTACCGGCAGTGGTGATGGAGATACATGGTTGC ATCATCTTTCCCAAGCACGCTGCTGATGAGCGGATCCATGCGAACGAGTC CTGTTGTTTGGTCCCCCGTGGTGTTTTACGGCGTATGGTACCGTTTTGGT TTGGTTCTGTGACGCTTTTTTCAACTGCCGTGCCTTGCTTTTGCGATTCG ACTCGACGACGCGGTTGGACTTCATCTCATCCACCCCTGTTTTTTCATAC ATGACTCACCAGGAAACAATTGTGGCGTTACACGAAGGGACCACCCAACA AAGAACCGGCCAAATATAGCATACGAAAAGTGCGTACCACACGTAGTCCT GTTGCGCAACAACACATGCCCCCCCTCCGCCCACTGTTGGCATCATCATC TCCCACGTGTATCCCTTCACTCGGCAGGAGGACCTGAAGGCCAAGCACAG CGAGTGCGTGAAGCGCGCCGAGCTTGTGGCGAACCCTCGGTCCTCTTCCT CCTCTTCTTCTCCTGGTGACGAAGGCGACGAAGGGGGGGCGGGGCAGGAC GGAGAACCAGCGGCCGCGAGCGACGGCCGGCCCCTGCGACGGGCGGGATT TGTCGAAGACTTGCGCGGCGTCTTGAACGGACTCTACAGGGTGAGGGGGC CAGAGAGGTGTCGGGGAGATGGAGAGCGGACGCGTTGGGAGCGCGTGTAT GGATGTATGTGCCGCCACATGGGGTGGTCTGGTGTGGTGTAGTGTGTGTG TTGTACGAAGGTAGCAATTATGTTAAATGCTCATCGTTCACGCAATGGCA TGACACAACCGCCTCCTTCCGTTGACACGCTGTTGTACAAGTCGAACCAC AACAGTTTGTGTGAGGTACCTACCAGTGGGTCCCAACCCTTCCTGTCGGA TGTGTGTGACAGACAACACGGCAACAAGTATGATAGTCGCTCTGCAACGA GATTTTGTTTTGTTTTGTGGTGGCCGCCTTTTGCGTGGCATGTTTGTTTC TTTGTTCCTGTCTTTTGCGAGTCTTTTTTCTGGTCTGGTTAGGCCGTGGA TGCATGCACCCCCCTCTTCCCTCCCCTTCGTTGTGTCTCCCCCTATTCGG CTATTCCTTCCTTCTCTTCCCTTGCGTCCTTATTTATATTTCTTTTTGTT CTTCCTTCCTCTTTCGCCTCAGGACTACTGCTTGACCAACGCGCGGCTGT GGTCAGATGCCGAGATTGCGGGGGCAAACGAGGTGGGCTGTGCCTTGTGT ATTTTTCGTTGTCGTGCCCTCCGCTCTCTTGCACGGCCTCTGTCCCAGCC AGTGGGTACGGTGTGTATACGTTTTCTCCGCGATCGTCCATCGCGGCGGG CTAGCGGTGGCGGTGGCGGCGGCGGGGGGGGGTGGCGTTCTCATGTTTTG CATACCTTAGCGGTTAGACCATTGACTATGCGTCGTCGAGAGGACGTTCT TGACATGGAATGCGGCGTTACGGACGGTGGTGCTGTGCTGTGCTGTGAGG GTTCCGCAGCAAAACCCAACCCAGGCAACGGTGGTATGGCAACGTCACCG TGACAGACATGGCCCATATGCTGTAAGTGCTGCTTGCTGTGTGGTGGTGG TGGTGGTGGTGGTGATGTTTTTCTTCGCTGCGTGGTGGTGATGGTGGTGG TGGTAGTGCTACTTTTGCCGTGACGAGAACTAAATTTAGAGACGTGGGTC GGCTTCGATTGGGCCGTCTTCAGACCCGATGGTTAGCTGTCTGGCTATAG ATACAAACCTTGACTGCCGTTGGTGAAGGGTACCGAACTAAAATTTTCAT CTTTTTCTGTTCCTCTTGGAGACAGCCTATGCAGGCAGGCAGCTCGCGGC ACATCGCACGGAACTAGTTTCCCTACCGAAACGCCTCCCCCCGCCGCCGG TTCTTTCGAGTCTAATCTGGGTACATACACTCGGCGGTGGCACGAAAACA GCACAGAGGGCAGGTGTCTCGAGCCTCAGCAGGAGGAAGTACCAGCCATG AGTTAATTCCGTAGGTTAGGATGGTGGTGGCACGGCTGTCGTGACACAGG AAACTCCCCTGGCACGACAGGGTACGGGTGAGCCTGGCTTGTGCTCCTCG CTACGGGTGAGCCTGGCTTGTGCTCCTCGCGAGCGGGTTGATGCTACCTG CGACGATTCATGTGTAATGCTCCGTCCCTCCCCCCCCCTCTTTGTGTTTT CCCCGCTGGCATCACAGGACTTGGAGGCGCTCCTCAGGGAGAAGCAGGAG CAACAGCGGGCGGGGTCAGGAGAGAAAGGGGATGGAGATCCGGAGCTTCC GCCGCCGCCACCGCCGGAGTACTCGCGCGTCACTGCCGTGTTCGAGAGCC GGAGCCAAAGGTTCGCGTTAGGGAGAAAAGCATATTGTTCTTCGTGCATC GCTTGCGCGGACGACTTTAGCGATAGAGTTGTACTTGTAGTCGTTGCTCA TTGCCTCTACCTCCCTTCCCCTGTCTCTTTGTTATTTTTATGCCCCATTT ATTCAGCGAGCGGCGCTCGCAGTTTTCAGTCACCTACAGTATACTACAGT ACATGCACATAGCCGACGACCGTACTGTACATCTTTCCAATCAAGCGAAT CCAACGGCGAGGGAGGGGGGGGGGGGGGGGGCACCCCGAAAATAGTCCAA TCCGCGTTGCACCCTTTCTTTGTTTTTCTTTTTATTTTTATAATAAGTTT TNNNNNNNNNNATCACAAAAAATACACAAAAATACAACCAATAACCCCAA ATCTTATCCTACCATATCCAAAAAAAGGCGAGGGGGGGGGGGGGGGGGGG GGGGGGGGGGAGGCACACCGACAATAGTCCAATCCGCGTTGCACCCTTTC GTTGTTTGTCCTATTATTATTATAATAACGTTTGGCGGTGTGCTCGCTCA AGATTTTCCCTCCCGCGTTCGATGTCTTTTTCTCGAATTCTGTGATTTGT TGTTCTGACAGCAGTGTTGGTGGAAACGATTTCGACAGTTTTTTTTTGTT CATTTCACGCCCGCGCTATCAGGTGGAATGTAAATGTTGTACCGGACATC ATCGGCTCACACCCGGATATGGAGGCGTTGTTGATCGTCGGGGGTGGTGA TTCGACGCCCCGCACCGGAGAACTGACGACAGGACACATCGAAGCCCTCT GGCGCGCTGTGGATAGTTTTTTGGAGCAAAGAGTCGCCACGGCCACGAAA CAGGCGAGCGTAAGATCTAGATTGCATTAGTTCGGTAACTTTTTTTGTTT TTTTGGCCTTGTCATTGGTCGTCGCCGTTTTTTTCTTGGAACAACTCAAC GATCTATCCATATCCCGTTCTTTCTCAGACAGGAGTCCGAGGTATGTTTA CAATCGGCCCATACAGCAGTAGCGTTTTATGATGACGATTCTTGCCTTTT GTCCTGTGGTTTGCTTTGCGAGGGTTTGTTCTCGTGTCGTCGTCATTTTT TTTGTTGTTTTTGTCTCTGAAAACGTAACAACTTTATCCCTTCCACCGAT ACGAGTCCGGGATAGATTAACGGCGAGTTCATAGCGTTCGTTCTATCATG ACGACCATTCTTGGTTGTCGCCCCTGTCGTGAGTATTACTGTTGCTGCTG CTGCTCTTCGCACAACAACCGCAAAAGATAAAAGATGCAACACCTACAAA TGACCAATAAAAAAACACGAATAGTGTAACCACAACACACAGTACATAAA ACAGGCGCGGGACGTGTTCAAGACTGCTGTAAAACCCAAATATGACTTGC AACAAAAAAACACACGGGTACCACACATGGCATAAAAAACAGGCGCAGGA CGCGTTCGAAGACGGGATGGACGACCTCTTCGCGAAGGTGCGGGACCTGC CCCAGCCGCCCCACCTGGCGGACGTGGAGTTCCTCTCGAATAGTGCCCAC GCCGCTGCCTGGGACGCGTACCATGCGGTGGAGCTGGCGGTCGGCGGCGA CAAGGCGAAAGAGGTCGCCGCCGCCCAGGGCTGGGCGGGGCAGGCGGAGA CGGCTGCCGGAACGTGGATGGCGCAAGCCCAGGAAGCCGTTCGCGGAGCA GACACCGGCGGCGGCGGCGGTGATGCCGGCGGGAAGGGTGCGGGTGCAGG AGACGGCGGTGGTGCCGGTAACGGCGGCGGCGGTGGCGGCAGCGGGGACG ACGGGAAGGCGGCAGCCGCCGCCGACGGCGGCGGCGGCGGCGGTGGCGGC GGCGGCGGTGACGGCGGCGCGGGTGGAGACGAGGCCGTAGCTCTGGCGGA GCGGGTCCTGAAGGAGCGCCACTCGCCCTGCGTCGAGAAGGTGACCCTCA AGACCAACCACGTGGACAAGTCCCTCGCGAAGTGCCGCAAGATCGCGGAC GAGGAGTGGGCGCTGGGGCGCGAGGAGAGCGGCAAGCCGGAGCTGGTGGA AGAGTGGAAACCCACGGTGCTGGACAAGGCCATGGACAAGAAGGAGTCGG AGCATGCGAACAAGTGAGCGGCGGAGAAGGATTCAGGATGGTCAGGGTTC ACCGTGGAGTCGGGGGGGGGCGATTTTTTACTCATTTTTATTTTGTTTGC CATCATCACGTCAAGTGTCAGCCGGTCAGGGGTCCCGCGCGTGTAGAGAT GGTCATACACGGGTGTAGACTTGTCTCTCGCACTCTGTCTCTCTGCTCTC TTCTCGTAGTGTCGTTTCGTCTCGGTGTCTTCAGTAGCAAGTTGCACCCA TGTGCACATCACCGATCATAAAGAGTCTAAGCACGCCATGCACAGCTGCT GTGCTTCCTACTACTGCTGTACCTGCCTGCAGAGCAGGCTCCAAGAAGAA AGGGTCGTCCGATAGTCTCGGTTTTTCTTAGCTTTGGCCAGGCTTGCCGC CAAACGGCCGACCCTTACTGGCGAGAAAAGAACGGCAGCACGGCCTTTGC GGCACAGACGTTGAGAGAAAATTTCACAAGAAGAAGAGCAGAGTGCCTGC GGCGCGACAATAAAGAGCCAAGAGTGTATAAAACAGTCAGATCAGGCGAC GGCTTTGGGTGTTATGAACGCTGTTGCTGAAGACTCAAATCGAAAAGAGT TGGCCGCATGAGCGAAGAGCGAGGAGAAGAAACATGGTGTACCGGTGTGC CTGGAAAGACGTTTCTTCGGACGGGGGGCGCCAGGGTAGAATCTCTATTG GGAGTGAAGAGTTCGTCGTAAAAGCCCTGCTTCGTATCCCACTGAAAGAG AGAGAGAGAGGGAGGGCGGGGGGGGCGTGGTATTGATGCCCCTCGTGCTC CCAGATTGTGTTCCGTTCGTCCACCACCCTGCCCTGTGGTCGTGCTGCAC AATCTCGACCGCCCTGCTGCCCCGCTTCCCGCCTCGTCCGTTGTTGTGCG CGCCACATCAGCCTCGTCAAAGTCGCTTCTGCAGCCATTGCCGACCGCTT CCATGACATGTCGGTCAAGTTTGAGCTGCCAGAACCGGACCAAGTAATCG ATCGCCTGTTCGACAGCTTGGTCGACCAGCTACAGAAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7765:93..6780+

>mRNA_E_fasciculatus_S2_contig7765.15929.1 ID=mRNA_E_fasciculatus_S2_contig7765.15929.1|Name=mRNA_E_fasciculatus_S2_contig7765.15929.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1695bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7765:93..6780+ (Ectocarpus fasciculatus EfasUO2)
CCTCCTCGTAACTACAACAACAGCGAGGCTTACCGGGGGGACGTGAAGAA
AGCGGTGGACCTCATCGTGCCGAAGTGCGCCCCGAAGGAGCTTGGCGGGA
AGGCGATGGACGGCGCCGCTCTGGCAACGTTTTTGCTCAAACTGACGCGG
GTGATGAACGTCCCCGTGGCTGCTGGCGACGGCCGTTTGTCGGCGTTCTT
GGACGTGCTAGAAGCGGGAGAGCTGCAAGCCGCCGAGGGCGCGTACAGGG
TTGAATGGGAGCGTGGCGATAACAACCACGAAGGCGTGCCACCCGGAGCG
GAGGACCTGAAGGCCAAGCACAGCGAGTGCGTGAAGCGCGCCGAGCTTGT
GGCGAACCCTCGGTCCTCTTCCTCCTCTTCTTCTCCTGGTGACGAAGGCG
ACGAAGGGGGGGCGGGGCAGGACGGAGAACCAGCGGCCGCGAGCGACGGC
CGGCCCCTGCGACGGGCGGGATTTGTCGAAGACTTGCGCGGCGTCTTGAA
CGGACTCTACAGGGACTACTGCTTGACCAACGCGCGGCTGTGGTCAGATG
CCGAGATTGCGGGGGCAAACGAGGACTTGGAGGCGCTCCTCAGGGAGAAG
CAGGAGCAACAGCGGGCGGGGTCAGGAGAGAAAGGGGATGGAGATCCGGA
GCTTCCGCCGCCGCCACCGCCGGAGTACTCGCGCGTCACTGCCGTGTTCG
AGAGCCGGAGCCAAAGGTGGAATGTAAATGTTGTACCGGACATCATCGGC
TCACACCCGGATATGGAGGCGTTGTTGATCGTCGGGGGTGGTGATTCGAC
GCCCCGCACCGGAGAACTGACGACAGGACACATCGAAGCCCTCTGGCGCG
CTGTGGATAGTTTTTTGGAGCAAAGAGTCGCCACGGCCACGAAACAGGCG
AGCGACGCGTTCGAAGACGGGATGGACGACCTCTTCGCGAAGGTGCGGGA
CCTGCCCCAGCCGCCCCACCTGGCGGACGTGGAGTTCCTCTCGAATAGTG
CCCACGCCGCTGCCTGGGACGCGTACCATGCGGTGGAGCTGGCGGTCGGC
GGCGACAAGGCGAAAGAGGTCGCCGCCGCCCAGGGCTGGGCGGGGCAGGC
GGAGACGGCTGCCGGAACGTGGATGGCGCAAGCCCAGGAAGCCGTTCGCG
GAGCAGACACCGGCGGCGGCGGCGGTGATGCCGGCGGGAAGGGTGCGGGT
GCAGGAGACGGCGGTGGTGCCGGTAACGGCGGCGGCGGTGGCGGCAGCGG
GGACGACGGGAAGGCGGCAGCCGCCGCCGACGGCGGCGGCGGCGGCGGTG
GCGGCGGCGGCGGTGACGGCGGCGCGGGTGGAGACGAGGCCGTAGCTCTG
GCGGAGCGGGTCCTGAAGGAGCGCCACTCGCCCTGCGTCGAGAAGGTGAC
CCTCAAGACCAACCACGTGGACAAGTCCCTCGCGAAGTGCCGCAAGATCG
CGGACGAGGAGTGGGCGCTGGGGCGCGAGGAGAGCGGCAAGCCGGAGCTG
GTGGAAGAGTGGAAACCCACGGTGCTGGACAAGGCCATGGACAAGAAGGA
GTCGGAGCATGCGAACAACCTCGTCAAAGTCGCTTCTGCAGCCATTGCCG
ACCGCTTCCATGACATGTCGGTCAAGTTTGAGCTGCCAGAACCGGACCAA
GTAATCGATCGCCTGTTCGACAGCTTGGTCGACCAGCTACAGAAG
back to top