mRNA_E_fasciculatus_S2_contig775.15914.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig775.15914.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q1_9PHAE) HSP 1 Score: 516 bits (1329), Expect = 2.290e-179 Identity = 320/438 (73.06%), Postives = 356/438 (81.28%), Query Frame = 1
Query: 1 MASWSDLCSIVALCAAVGCFRLLLILRRHVSLLAGAAASNVLDNNESKRGRERARDLRVAETRSTPRGAHQTRNRVDPQGFVFSGRFERVWLAFDSLLDRAAVVENDASLDSDANLLKRTFSAAVEDAVAAGIAAAEQKMVLAFQVKMAQVLVKEMGEWRVMQEGREAWWQRKFDREENKLGTALAAAVASHEDAMAARDRKCAATVASVRDEVLQLKEQAAVNAAGKAADDA-AREKAALANILRSINATHQRQQEELVGLQQEMREGLAR-KVEEAYSASRHGDRPSAAADASXXXXXSMDDTTKLRNVKSDLDSLGARLLVLE----GIASPRRQKRILYRVHERVLESFRVWGEEPFVGPQYSNWVLRKA---SGKTGPGAGDEEDENTTLRKKGKGESGKEGSTTEXXXXXXXXSNGCMSGGGEGGQGRAPSA 1287
MA+WS +CS+VALCAAVGCFRLLLIL RHVSLLAGAA SN LDNNE K GR+R R + ETR GAHQ+R+RVDPQG VFS RFE+VW+AFD LLDR AVVE+DA+LD+DANL K SA++EDAVAAGIAAAEQKM LAFQ KMAQ ++ E G+WRVMQE REAWWQRKFD EENKLGTALAAAVASHEDAM AR+RKC ATV SVR +VLQLKEQAA NAA KAADDA AREKAA+A++LR+INATHQ QQE +V +QQE+RE LAR KVEEA SASR GD SAAA+AS SMDDTTKLRNVKSDLDSLGARLL LE G+ SPR+ R L++VHE VLES RVWGEEP VGP Y+ WVLRK S K GPG+GDE DE TT R+K +G SGK GSTT XXXXXXXX CM GGGEGGQGRAPS+
Sbjct: 1 MATWSIICSLVALCAAVGCFRLLLILSRHVSLLAGAA-SNALDNNERKSGRKRMRG-HLPETRRRSTGAHQSRSRVDPQGSVFSSRFEKVWVAFDRLLDRVAVVEHDANLDNDANLSKGKLSASMEDAVAAGIAAAEQKMALAFQAKMAQAVMNETGKWRVMQESREAWWQRKFDLEENKLGTALAAAVASHEDAMEARERKCTATVDSVRADVLQLKEQAAGNAARKAADDASAREKAAMADLLRAINATHQMQQEAVVAVQQEVRECLARRKVEEASSASR-GDPLSAAAEASPRPP-SMDDTTKLRNVKSDLDSLGARLLALENAGNGLVSPRKLNRTLHKVHESVLESIRVWGEEPLVGPVYTEWVLRKLKKNSSKIGPGSGDEGDEKTTPREKSEGGSGKGGSTTXXXXXXXXXXXDCMPGGGEGGQGRAPSS 434
BLAST of mRNA_E_fasciculatus_S2_contig775.15914.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID0_ECTSI) HSP 1 Score: 410 bits (1053), Expect = 5.110e-136 Identity = 245/327 (74.92%), Postives = 269/327 (82.26%), Query Frame = 1
Query: 1 MASWSDLCSIVALCAAVGCFRLLLILRRHVSLLAGAAASNVLDNNESKRGRERARDLRVAETRSTPRGAHQTRNRVDPQGFVFSGRFERVWLAFDSLLDRAAVVENDASLDSDANLLKRTFSAAVEDAVAAGIAAAEQKMVLAFQVKMAQVLVKEMGEWRVMQEGREAWWQRKFDREENKLGTALAAAVASHEDAMAARDRKCAATVASVRDEVLQLKEQAAVNAAGKAADDAARE-KAALANILRSINATHQRQQEELVGLQQEMREGLAR-KVEEAYSASRHGDRPSAAADASXXXXXSMDDTTKLRNVKSDLDSLGARLLVLEG 975
M WS +CS+VALCAAVGCFRLLLIL RHVSLL GAA S VLDNNESKRGR+R RDL + TR GAHQTR+RVDPQG VFSG+FE++WLAFD+LL R AVVENDA++++DANLLK SAA+EDAVA GIAAAEQKM LAFQ KMAQ +V EMG+ RVMQEGREAWWQRKFD EENKLGTALAAAVASHEDAMAAR RK AAT SVRD+VLQLKEQAA NAAGK KAA AN+LRSI+ATHQRQQE ++ LQQE+RE LAR KVEE SASR GDRPS AA+AS SM+DTTKLRNVKSDLDSLGARLL LE
Sbjct: 1 MTPWSGICSMVALCAAVGCFRLLLILSRHVSLLVGAA-SKVLDNNESKRGRKRMRDLSLTGTRPRSAGAHQTRSRVDPQGSVFSGKFEKIWLAFDNLLHRVAVVENDANVENDANLLKGNLSAAIEDAVAGGIAAAEQKMALAFQAKMAQAVVNEMGKRRVMQEGREAWWQRKFDLEENKLGTALAAAVASHEDAMAARQRKYAATFNSVRDDVLQLKEQAADNAAGKXXXXXXXXXKAATANLLRSISATHQRQQEAVMALQQEVRECLARRKVEEVSSASR-GDRPSVAAEASPRPP-SMEDTTKLRNVKSDLDSLGARLLALEN 324
BLAST of mRNA_E_fasciculatus_S2_contig775.15914.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ2_9PHAE) HSP 1 Score: 251 bits (642), Expect = 1.000e-75 Identity = 186/381 (48.82%), Postives = 237/381 (62.20%), Query Frame = 1
Query: 1 MASWSDLCSIVALCAAVGCFRLLLILRRHVSLLAGAAASNVLD---NNESKRGRERARDLRVAETRSTPR---GAHQTR--NRVDPQGFVFSGRFERVWLAFDSLLDRA-AVVENDASLDSDANLLKRTFSAAVEDAVAAGIAAAEQKMVLAFQVKMAQVLVKEMGEWRVMQEGREAWWQRKFDREENKLGTALAAAVASHEDAMAARDRKCAATVASVRDEVLQLKEQAAVNA-AGKAADDAA-REKAALANILRSINATHQRQQEELVGLQQEMREGLARKVEEAYSASRHGDRPSAAADASXXXXXSMDDTTKLRNVKSDLDSLGARLLVLEGIASPRRQKR-ILYRVHERVLESFRVWGEEPFVGPQYSNWVLRKAS 1107
MASWS +CS+VA CAA+GCF LL L R + LLA A +D + ESKR R D V T +PR GAH TR NR + QG RFE+V LAFD L D A VEND D + +AA++D VAAGIAA+E KM LAFQ ++ Q L ++MG + M+ REAWW+RK D E++LG ALAAAVAS E MA R+ KCAATVA+V D+VL+LKEQA N AG+A D AA +EKAA+A + RSI ++ E + +Q+EM+E A E +A+ GD A A+ S+D T KL NVKSD+D LG+RLL++E A + I YRVHE V+ES RVWG EP V P Y++W+ + AS
Sbjct: 1 MASWSGICSVVAPCAALGCFWLLFTLSRRLILLAEAVLDGGVDRLFDKESKRRCGRDHDPGVDGT--SPRSVGGAHPTRPGNRANSQGADGDRRFEKVRLAFDGLFDGGGAGVEND-----DVDRFMGLLTAAIDDVVAAGIAASEAKMGLAFQSQITQALEEKMGTAQAMERHREAWWKRKLDGMESRLGRALAAAVASQEGTMAIREEKCAATVAAVCDDVLRLKEQATDNTVAGEATDGAAAKEKAAVAELTRSIAEKQEKMNERVAKVQREMQECFA---EGRPAAAPCGD----GAGAAMVSPSSVDHTAKLNNVKSDIDYLGSRLLIVENAAYEADEMHGIFYRVHESVVESTRVWGTEPLVAPLYTDWLDKLAS 367
BLAST of mRNA_E_fasciculatus_S2_contig775.15914.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE) HSP 1 Score: 104 bits (259), Expect = 3.850e-20 Identity = 83/175 (47.43%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 517 KFDREENKLGTALAAAVASHEDAMAARDRKCAATVASVRDEVLQLKEQAAVNA-AGKAADDAA-REKAALANILRSINATHQRQQEELVGLQQEMREGLARKVEEAYSASRHGDRPSAAADASXXXXXSMDDTTKLRNVKSDLDSLGARLLVLEGIA-SPRRQKRILYRVHERVL 1032
K D E++LG ALAAAV + AMA R+ KCAATVA+ R++VL+LKEQA NA AG+ D AA +EKAA+A + RSI ++ E + +Q+EM+E A E +A+ GD A A+ S+ T KL NVKSD+D LG+RLL++E A RILYRVHE V+
Sbjct: 917 KLDGMESRLGRALAAAV---QGAMAVREGKCAATVAAAREDVLRLKEQATYNAVAGEETDGAAAKEKAAVAGLTRSIAEKQEKMNERVARVQREMQECFA---EGRPAAAPCGD----GAGAAMVSPSSVAHTAKLNNVKSDIDYLGSRLLIVENAAYEAEEMHRILYRVHESVV 1081
BLAST of mRNA_E_fasciculatus_S2_contig775.15914.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J5_9PHAE) HSP 1 Score: 104 bits (259), Expect = 3.960e-20 Identity = 83/175 (47.43%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 517 KFDREENKLGTALAAAVASHEDAMAARDRKCAATVASVRDEVLQLKEQAAVNA-AGKAADDAA-REKAALANILRSINATHQRQQEELVGLQQEMREGLARKVEEAYSASRHGDRPSAAADASXXXXXSMDDTTKLRNVKSDLDSLGARLLVLEGIA-SPRRQKRILYRVHERVL 1032
K D E++LG ALAAAV + AMA R+ KCAATVA+ R++VL+LKEQA NA AG+ D AA +EKAA+A + RSI ++ E + +Q+EM+E A E +A+ GD A A+ S+ T KL NVKSD+D LG+RLL++E A RILYRVHE V+
Sbjct: 1544 KLDGMESRLGRALAAAV---QGAMAVREGKCAATVAAAREDVLRLKEQATYNAVAGEETDGAAAKEKAAVAGLTRSIAEKQEKMNERVARVQREMQECFA---EGRPAAAPCGD----GAGAAMVSPSSVAHTAKLNNVKSDIDYLGSRLLIVENAAYEAEEMHRILYRVHESVV 1708 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig775.15914.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig775.15914.1 >prot_E_fasciculatus_S2_contig775.15914.1 ID=prot_E_fasciculatus_S2_contig775.15914.1|Name=mRNA_E_fasciculatus_S2_contig775.15914.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=430bp MASWSDLCSIVALCAAVGCFRLLLILRRHVSLLAGAAASNVLDNNESKRGback to top mRNA from alignment at E_fasciculatus_S2_contig775:2295..3584- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig775.15914.1 ID=mRNA_E_fasciculatus_S2_contig775.15914.1|Name=mRNA_E_fasciculatus_S2_contig775.15914.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1290bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig775:2295..3584- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig775:2295..3584- >mRNA_E_fasciculatus_S2_contig775.15914.1 ID=mRNA_E_fasciculatus_S2_contig775.15914.1|Name=mRNA_E_fasciculatus_S2_contig775.15914.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1290bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig775:2295..3584- (Ectocarpus fasciculatus EfasUO2)back to top |