mRNA_E_fasciculatus_S2_contig7735.15900.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7735.15900.1 vs.
Match: B (box-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ1_9PHAE) HSP 1 Score: 838 bits (2164), Expect = 9.440e-289 Identity = 599/802 (74.69%), Postives = 619/802 (77.18%), Query Frame = 1
Query: 1 SEEELAPPPEALEESGWLAGVWPSQRPRTSPHPAIPASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTKNGNGAIVSSGAGQANGKSVEGWEGASVNRNIAAVPGAVSGAPAAATSAQSMTGNGEAAXXXXXXXXXXXGQPKKAKLNGSALAAAXXXXXXXXXXXXXXXXXXXQTPTIVPLTPPSTSTGVAIEVGAAPXXXXXXXXXXXXXXXXXXXX----------------AACRPEGHEGPLCPSGSFFSKPQTPPGSPTGGVSNGKNGATSTGERETNAQGGVGMDAKAEVDVAGGGRGPGRHSQEGDRSAAGGTXXXXXXXGSXXXXXXXXXXXXXXDAGARAEESTKNGHGQSRNNGLPSSAAGKAGGEEAEAVVPAQALAAGATAGSDDMDVEAPLFSPAAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGPAREATKSEKESLADLHRRSTNIPLRLDPREREILGVLEGSLHHVQYTDEVDRIVRGSRLPYVLKNLGQFFTSVWGMYKASGVSLPTYSPPSGAAKRLPPRHLLPSNKPPYQNGGSSRGGPAPVFSGKARAAGGGRNGSXXXXXXXXXXXXXXXXXXPAATA--GGDGATAYREDSFVHKRTGWGYKLDWACALRTCFEVGRRHKILNPEKMRSAHGMLMCILMDTEHPLVREQTGFSSVRSMRTAFGLSVSTNLMGLFEDPDLLAASRPVLPWERGQKLQKGGRNVEEMALQAKEKAEARRRLVARHGTGGLACEVKLLVDSVADSIVYREISTRPIRRMLSLTEHN 2352
SEEELAPPPEALEESGWLAGVWPS RPR SPHPAIPA S XXXXXXXXX + +NG GAIV +GAG ANGKS EGWE AS RN AVP SGAPA+AT A+SMTGN XXXXXXXXXXX KAKLNGSAL AA QTP IVPL+PPSTSTGV IE GAAP XXXXX AACRP+GHEGPLCPSGSFFSKPQTPPGSPTGGVSNGKNGA VGM AK EVDVAGG RG GRHSQEG+ SA XXXXXXX XXXXXXXXXXXXXX AEEST+NGHG++ NNGL SAA KAGGEEA AVV A A AGAT G DDMDV+APL SPA ME XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VGPAREATKSEKESL DL+RRSTNIPLRLDPREREILGVLEGSLHHVQYTDEVDRI+RG RLPYVLKNLG FFTSVWGMYKASGVSLPTYSPPSGA KRL PRHL S KPP QNGGS R GPAP+ SGKARAA GGRNGS XXXXXXXXXXXXXXXXX GGDGAT YREDSFVHKRTGWGY LDWAC LR+CFEVGRRHKILNPEKMRS HGMLMCILMDTEHPLVREQTGFS VRSMRTAFGLSVS NL LFEDPDLL ASRPVLPWERGQKLQKGGRNVEE+ALQAKEKAEARRRLV RHG+GGLACEV LLVDSVADSIVYREISTRPIRRMLSL ++N
Sbjct: 193 SEEELAPPPEALEESGWLAGVWPSHRPRASPHPAIPAPSSSSAGAGIEVGGVSLDNGXXXXXXXXXVVIARENGIGAIVGNGAGPANGKSAEGWECASAKRNTEAVPVIYSGAPASATGARSMTGNXXXXXXXXXXXXXXXXXXXKAKLNGSALVAAAAPAPAAPEAAAPP-----QTPKIVPLSPPSTSTGVDIEEGAAPTPESRAHRSGNGNGXXXXXSXXXXXXXXXXXXXXXXAACRPDGHEGPLCPSGSFFSKPQTPPGSPTGGVSNGKNGAXXXXXXXXXXXXXVGMRAKVEVDVAGGARGQGRHSQEGECSAX--XXXXXXXXXXXXXXXXXXXXXXXXXXXLLAEESTENGHGENINNGLSCSAAAKAGGEEA-AVVAAPAPTAGAT-GPDDMDVDAPLISPAEMEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDEAVGPAREATKSEKESLVDLYRRSTNIPLRLDPREREILGVLEGSLHHVQYTDEVDRIMRGGRLPYVLKNLGHFFTSVWGMYKASGVSLPTYSPPSGAEKRLQPRHLPASVKPPSQNGGS-RSGPAPL-SGKARAASGGRNGSSXXXXXXXXXXXXXXXXXXXXXXXXGGDGATGYREDSFVHKRTGWGYTLDWACVLRSCFEVGRRHKILNPEKMRSTHGMLMCILMDTEHPLVREQTGFSCVRSMRTAFGLSVSANLTRLFEDPDLLTASRPVLPWERGQKLQKGGRNVEEIALQAKEKAEARRRLVGRHGSGGLACEVTLLVDSVADSIVYREISTRPIRRMLSLLKNN 983
BLAST of mRNA_E_fasciculatus_S2_contig7735.15900.1 vs.
Match: B (box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F4_ECTSI) HSP 1 Score: 567 bits (1461), Expect = 1.450e-190 Identity = 390/659 (59.18%), Postives = 405/659 (61.46%), Query Frame = 1
Query: 1 SEEELAPPPEALEESGWLAGVWPSQRPRTSPHPAIPASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTKNGNGAIVSSGAGQANGKSVEGWEGASVNRNIAAVPGAVSGAPAAATSAQSMTGNGEAAXXXXXXXXXXXGQPKKAKLNGSALAAAXXXXXXXXXXXXXXXXXXXQTPTIVPLTPPSTSTGVAIEVGAAPXXXXXXXXXXXXXXXXXXXXAACRPEGHEGPLCPSGSFFSKPQTPPGSPTGGVSNGKNGATSTGERETNAQGGVGMDAKAEVDVAGGGRGPGRHSQEGDRSAAGGTXXXXXXXGSXXXXXXXXXXXXXXDAGARAEESTKNGHGQSRNNGLPSSAAGKAGGEEAEAVVPAQALAAGATAGSDDMDVEAPLFSPAAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGPAREATKSEKESLADLHRRSTNIPLRLDPREREILGVLEGSLHHVQYTDEVDRIVRGSRLPYVLKNLGQFFTSVWGMYKASGVSLPTYSPPSGAAKRLPPRHLLPSNKPPYQNGGSSRGGPAPVFSGKARAAGGGRNGSXXXXXXXXXXXXXXXXXX---PAATAGGDGATAYREDSFVHKRTGWGYKLDWACALRTCFEVGRRHKILNPEKMRSAHGMLM 1968
SEEELAPPPEALEESGWLAGVWPSQRPR SPHPAIPASS XXXXXXXXXXXXXXX +NGNGAIV +GAG ANGKS EGWEG S NRN AVP SG+PAAAT AQS+TGNGE A GQPKK TPPGSPTGG SNGKNGA TG+ + N G VG+DAKAEVDVAGGGRG GRHSQEGD SA GG XXXXXX + DA RAEEST+NGHG+S NNGL AVV A A AGAT G DDMDVE PLFSPAAME GPAREATKSEKESL DL+RRSTNIPLRLDPREREILGVLEGSLHHVQYTD+VDRI+RG+RLPYVLKNLG FFTSVWGMYKASGVSLPTYSPPSGAAKRL PRHL PS KPPYQNGGS RGGPAPVFSGKARAAGGGR XXXXXXX XX PAATA GDGAT YREDSFVHKRTGWGY LDWACALRTCFEVGRRHKILNPEKMRSAHGML+
Sbjct: 99 SEEELAPPPEALEESGWLAGVWPSQRPRASPHPAIPASSSSSAGAGTEVGGVSXXXXXXXXXXXXXXXXARQNGNGAIVGNGAGPANGKSAEGWEGDSANRNTEAVPVFSSGSPAAATGAQSITGNGETAAAKGGAVVVPGGQPKK--------------------------------------------------------------------------------------------------TPPGSPTGGFSNGKNGAIPTGDTKKNTHGEVGIDAKAEVDVAGGGRGQGRHSQEGDCSAVGGIGXXXXXXXNGSTPAAGRAANG--DARLRAEESTENGHGESSNNGLSXXXXXXXXXXXXAAVVSAPAPKAGAT-GLDDMDVEVPLFSPAAMEAAAAGGGTDVEVPHASAPASEKPVGANGGGVSAGGDEAAGPAREATKSEKESLVDLYRRSTNIPLRLDPREREILGVLEGSLHHVQYTDQVDRIMRGNRLPYVLKNLGHFFTSVWGMYKASGVSLPTYSPPSGAAKRLQPRHLPPSVKPPYQNGGS-RGGPAPVFSGKARAAGGGRXXXXXXXXXXAYAWSVAGAXXXKAPAATACGDGATGYREDSFVHKRTGWGYTLDWACALRTCFEVGRRHKILNPEKMRSAHGMLV 655
BLAST of mRNA_E_fasciculatus_S2_contig7735.15900.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F3_ECTSI) HSP 1 Score: 233 bits (595), Expect = 1.810e-66 Identity = 121/129 (93.80%), Postives = 124/129 (96.12%), Query Frame = 1
Query: 1966 MCILMDTEHPLVREQTGFSSVRSMRTAFGLSVSTNLMGLFEDPDLLAASRPVLPWERGQKLQKGGRNVEEMALQAKEKAEARRRLVARHGTGGLACEVKLLVDSVADSIVYREISTRPIRRMLSLTEHN 2352
MCILMDTEHPLVREQTGFS VRSMRTAFGLSVS +LMGLFEDPDLLAASRPVLPWERGQKL KGGRNVEEMALQAKEKAEARRRLVARHGTGGLACEV LLVDSVADSIVYREISTRPIRRMLSL ++N
Sbjct: 1 MCILMDTEHPLVREQTGFSCVRSMRTAFGLSVSADLMGLFEDPDLLAASRPVLPWERGQKLLKGGRNVEEMALQAKEKAEARRRLVARHGTGGLACEVTLLVDSVADSIVYREISTRPIRRMLSLLKNN 129
BLAST of mRNA_E_fasciculatus_S2_contig7735.15900.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N294_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 1.280e-13 Identity = 56/161 (34.78%), Postives = 82/161 (50.93%), Query Frame = 1
Query: 1873 DWACALRTCFEVGRRHKILNPEKMRSAHGMLMCILMDTEHPLVREQTGFSSVRSMRTAFGLSVSTNLMGLFEDPDLLAASRPVLPWERGQKLQKGGRNVEEMALQAKEKAEARRRLVARHGTG-GLACEVKLLVDSVADSIVYREISTRPIRRMLSLTEHN 2352
D CA+ FEVGRR+K++NP+K+RS +G LM +L D + P +R+ GF VR + T S L ED DLL A PVLP + +K Q A RLVA++G+ + ++ ++ S+AD P+ RMLSL + +
Sbjct: 13 DLFCAI---FEVGRRYKVMNPDKLRSTYGKLMYLLQDAQMPEIRDSIGFRVVRQVLTVRSELDSLGASELLEDEDLLDAVAPVLPGDSMEKKQ-----------------AAIDRLVAKYGSSKAVKPRIERVLHSIADDESLTSAHVEPVERMLSLLQEH 153
BLAST of mRNA_E_fasciculatus_S2_contig7735.15900.1 vs.
Match: B (box-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKN4_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.640e-13 Identity = 57/157 (36.31%), Postives = 83/157 (52.87%), Query Frame = 1
Query: 1888 LRTCFEVGRRHKILNPEKMRSAHGMLMCILMDTEHPLVREQTGFSS-VRSMRTAFGLSVSTNLMGLFEDPDLLAASRPVLPWERGQKLQKGGRNVEEMALQAKEKAEARRRLVARHGTGGLACE-VKLLVDSVADSIVYREISTRPIRRMLSLTEHN 2352
R FEVGRR+K++NPEK+R HG LM +L D + ++ Q GF S V+ + T L G +D +L ASR V ++G R E +A K A R L GTG L+ + V+ L+DS+AD+ Y + RP++R+L + N
Sbjct: 287 FREIFEVGRRYKVMNPEKLRGTHGKLMYMLQDAQGRSLQAQIGFGSCVKPLATVGALLKDRAQEGFLQDARVLLASRDV-------SARRGERGRAEARREAWMKRRAARELQVEWGTGELSSDDVQRLLDSMADANNYLNFNVRPVKRVLRQLQDN 436
BLAST of mRNA_E_fasciculatus_S2_contig7735.15900.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8H9_9EUKA) HSP 1 Score: 81.3 bits (199), Expect = 2.260e-12 Identity = 58/159 (36.48%), Postives = 79/159 (49.69%), Query Frame = 1
Query: 1870 LDWACALRTCFEVGRRHKILNPEKMRSAHGMLMCILMDTEHPLVREQTGFSSVRSMRTAFGLSVSTNLMGLFEDPDLLAASRPVLPWERGQKLQKGGRNVEEMALQAKEKAEARRRLVARHGTGGLAC--EVKLLVDSVADSIVYREISTRPIRRMLSL 2340
D CA+ FEVGRR+K++NP+KMRS +G LM +L D + ++ GF VR+M T + L ED DL AA R VLP E A+ K EA RLVA++G G A ++ ++ S+AD P+ RML L
Sbjct: 99 FDLFCAV---FEVGRRYKVMNPDKMRSTYGKLMHMLQDAQSTEIQHAIGFRVVRAMLTVRRELEDMSATELLEDADLEAAVRAVLPGES-----------------AEAKREATTRLVAKYGGGDAAACARIERVLVSLADDEALTLAHVAPVERMLQL 237
BLAST of mRNA_E_fasciculatus_S2_contig7735.15900.1 vs.
Match: Uncharacterized (protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AFV5_AUXPR) HSP 1 Score: 82.0 bits (201), Expect = 2.290e-12 Identity = 52/157 (33.12%), Postives = 80/157 (50.96%), Query Frame = 1
Query: 1879 ACALRTCFEVGRRHKILNPEKMRSAHGMLMCILMDTEHPLVREQTGFSSVRSMRTAFGLSVSTNLMGLFEDPDLLAASRPVLPWERGQKLQKGGRNVEEMALQAKEKAEARRRLVARHGTGGLA-CEVKLLVDSVADSIVYREISTRPIRRMLSLTE 2346
A + CFEVGRRHKI+NPEKMR +G LM +LMD P ++E F+ +R +RT + L + L +DP L A+ ++ G E+ + K K AR L RH + L+ +V + S++D+ Y + P+ +M+ E
Sbjct: 317 ATFFQDCFEVGRRHKIMNPEKMRDTYGKLMYMLMDASEPEIQELLEFNCIRPLRTVYTLLEGAGALALLDDPLLDCATA---------EIHASGVPRHEVQRRIKAKERAREVLARRHRSATLSEDDVLRCLYSISDNNTYLLFNRDPVDKMIGYLE 464
BLAST of mRNA_E_fasciculatus_S2_contig7735.15900.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WFN3_9SPIT) HSP 1 Score: 75.1 bits (183), Expect = 4.830e-12 Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = 1
Query: 1888 LRTCFEVGRRHKILNPEKMRSAHGMLMCILMDTEHPLVREQTGFSSVRSMRTAFG-LSVSTNLMGLFEDPDLLAASRPVLPWERGQKLQKGGRNVEEMALQAKEKA--EARRRLVARHGTGGLACEVKLLVDSVADS 2289
+T E+GRR+KILNPE+MR A+G LM L D+ P VRE F SV +RT + LS S + + EDP L A+ ++P +G+ + +E A+++ K RR HG GG + + LL S DS
Sbjct: 4 FQTVLEIGRRYKILNPERMRDAYGKLMYFLQDSRKPDVRELIEFDSVVRVRTVYDVLSKSPRGLEMLEDPQLRIATMEIMPEGKGRTQVQREIKAKEAAIKSLSKTYCSVARRRKRHHGFGGYS--LGLLRSSYHDS 138
BLAST of mRNA_E_fasciculatus_S2_contig7735.15900.1 vs.
Match: Uncharacterized (protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLB5_9CHLO) HSP 1 Score: 80.1 bits (196), Expect = 1.420e-11 Identity = 55/156 (35.26%), Postives = 81/156 (51.92%), Query Frame = 1
Query: 1873 DWACALRTCFEVGRRHKILNPEKMRSAHGMLMCILMDTEHPLVREQTGFSSVRSMRTAFGLSVSTNLMGLFEDPDLLAASRPVLPWERGQKLQKGGRNVEEMALQAKEKAEARRRLVARHGTGGLACEVKL-LVDSVADSIVYREISTRPIRRMLS 2337
D A + CFEVGRRHK++NPEKMR +G LM +LMD+ V+E F VR +RT L + L +DP + AA+ ++ GG E+ + K K AR L R+ + L+ E L + S++D+ Y + PI R++S
Sbjct: 305 DLATFFQDCFEVGRRHKVMNPEKMRETYGKLMYLLMDSCEGEVQELLEFKCVRPLRTVHVLLEERGALALLDDPLMEAATAEIVA---------GGAPRHEVQRRIKAKERARETLARRYRSRSLSEEDILHCLYSISDNNSYLLFNRDPIDRVIS 451
BLAST of mRNA_E_fasciculatus_S2_contig7735.15900.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WEE8_TETOB) HSP 1 Score: 79.0 bits (193), Expect = 1.710e-11 Identity = 53/146 (36.30%), Postives = 76/146 (52.05%), Query Frame = 1
Query: 1900 FEVGRRHKILNPEKMRSAHGMLMCILMDTEHPLVREQTGFSSVRSMRTAFGLSVSTNLMGLFEDPDLLAASRPVLPWERGQKLQKGGRNVEEMALQAKEKAEARRRLVARHGTGGLA-CEVKLLVDSVADSIVYREISTRPIRRML 2334
FE+GRR+KI+NPEKMRS G LM +LMD+ P V+E GFS VR +RT + L +DP L A+ ++ ER + L + K K AR+ L ++ GL E+ + S +D+ Y + PI RM+
Sbjct: 335 FEIGRRYKIMNPEKMRSEFGKLMYMLMDSSDPGVQELLGFSCVRPLRTVAAFLEERGRLELLDDPLLEVATAEIVAGERPRAL---------VQRDIKRKESARQTLARKYKHAGLTEDEILSAIYSTSDNNSYLLFNRDPIDRMI 471 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7735.15900.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7735.15900.1 >prot_E_fasciculatus_S2_contig7735.15900.1 ID=prot_E_fasciculatus_S2_contig7735.15900.1|Name=mRNA_E_fasciculatus_S2_contig7735.15900.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=784bp SEEELAPPPEALEESGWLAGVWPSQRPRTSPHPAIPASSSSSAGARAEGGback to top mRNA from alignment at E_fasciculatus_S2_contig7735:221..7157- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7735.15900.1 ID=mRNA_E_fasciculatus_S2_contig7735.15900.1|Name=mRNA_E_fasciculatus_S2_contig7735.15900.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6937bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7735:221..7157- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7735:221..7157- >mRNA_E_fasciculatus_S2_contig7735.15900.1 ID=mRNA_E_fasciculatus_S2_contig7735.15900.1|Name=mRNA_E_fasciculatus_S2_contig7735.15900.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2352bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7735:221..7157- (Ectocarpus fasciculatus EfasUO2)back to top |