mRNA_E_fasciculatus_S2_contig7733.15899.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7733.15899.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRG3_ECTSI) HSP 1 Score: 702 bits (1813), Expect = 2.410e-250 Identity = 409/517 (79.11%), Postives = 428/517 (82.79%), Query Frame = 1
Query: 1 MDHEDNGQRLRRNIQRQEYDGSSGPPPGEDAGYSSNRYPERAGGDDVFFGGARRTAGEPEQVGEYDEHGNR-VELDNHSSGTGLRRLAPQQDGSYPPEEAGY--RDYDHHDPEGPETRSLPRLYDGDGRVEGEYTHRHDDRERVDFQPNGYDDGRTGVHDVGQGGSDGXXXXXXXXXXESYRCSPRVRYRQQHRYGDDDHEGAHYLRDGAGVGFTERGPRNSSSSGSKDRGSSGRQNFTQVDAGEGSTVAGAGRSRAKRVEFSEGLQGPTTQEPRAPRSSVRRHLVSPKALPPKRADASPK----AQVSPAKRWRSQAERSPSPVSAGTRPCAADSEDKTTALVKTPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAARGDSDRRXXXXXXXXXXRTRALAFARKIPLPRKVVKAQQQPAADPGDPGERRRAGRRGKSGVPESEGWRSAEMTELEALEAMHDDMRKKVQEARSSF 1530
MD EDNG RLRR+IQRQEYD S PPPG+DAGYSSN YPE GGD+VFFGGARRT GEPE+VGEYDEHGN+ VELDN SSGTG RR+A QQDGSYPPEEAGY RDY HHDPEGPETRSLPR YD DGRVEGE+T+R +RER D QPNG DGRTGVHD GQ G G ESYRCSPRVRYRQ HR+GDD HE A ++RDGAGVGFT R RNSSSSGS DRGS GRQNFTQVD +GSTV G SRAKRVEFS+G+QGP EPR PRSSVRRHLVSPKA+PP+RA ASPK AQ SPAKRWRSQAERS SPVS GT+PCAADSEDKTTALVKTPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAARGD XXXXXXXXXX LAFARKIPLPRKVVKAQQ PAADPG VPE+EGWRSAEMTELEALEAMHDDMRKKVQEARSSF
Sbjct: 1 MDREDNG-RLRRSIQRQEYD-ESWPPPGKDAGYSSNGYPEHVGGDEVFFGGARRTTGEPERVGEYDEHGNQPVELDNRSSGTGRRRIAQQQDGSYPPEEAGYLMRDYHHHDPEGPETRSLPRHYDVDGRVEGEFTNRDGNRERGDLQPNGCADGRTGVHDFGQRGP-GGRSGEESGGRESYRCSPRVRYRQHHRHGDDHHESARHVRDGAGVGFTGRDSRNSSSSGSSDRGSIGRQNFTQVDVVDGSTVTDPGPSRAKRVEFSQGIQGPA-HEPRVPRSSVRRHLVSPKAVPPQRAAASPKVQKCAQDSPAKRWRSQAERSISPVSTGTQPCAADSEDKTTALVKTPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAARGDXXXXXXXXXXXXXXXXXXLAFARKIPLPRKVVKAQQPPAADPGXXXXXXXXXXXXXXXVPETEGWRSAEMTELEALEAMHDDMRKKVQEARSSF 513
BLAST of mRNA_E_fasciculatus_S2_contig7733.15899.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CHN1_SAPPC) HSP 1 Score: 107 bits (267), Expect = 2.120e-22 Identity = 62/117 (52.99%), Postives = 73/117 (62.39%), Query Frame = 1
Query: 1015 TPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAARGDSDRRXXXXXXXXXXRTRALAFAR-KIPLPRKVVKAQQQP 1362
T D L FSKKAR V Y+PCTL EY++ KP GY ELGKL+PDL D+LV KRAN ERIKEFS NLR IN T R + R +ALAFA+ K+P P+ V+K P
Sbjct: 125 TEHDQLAFSKKARPVQYEPCTLTEYKQEKPAGYYELGKLKPDLNADDLVEKRANKERIKEFSKNLRAINQTTLKKRDVVE--TVAPEKTLSTRDKALAFAKDKVPKPKMVIKKASSP 239
BLAST of mRNA_E_fasciculatus_S2_contig7733.15899.1 vs.
Match: Uncharacterized (protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJQ3_PLAHL) HSP 1 Score: 108 bits (269), Expect = 2.370e-22 Identity = 62/124 (50.00%), Postives = 73/124 (58.87%), Query Frame = 1
Query: 1012 KTPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAAR-GDSDRRXXXXXXXXXXRTRALAFARKIPLPRKVVKAQQQPAADPGD 1380
K P D L FS+KAR V Y+PC L +YR+ KP GY ELGKLQPDL TDELV KRA ER+K FS N R IN +T A R D+ R R + LAFA+ +P PR K + D D
Sbjct: 157 KAPNDQLAFSRKARPVQYEPCNLSQYRKEKPDGYFELGKLQPDLNTDELVEKRAKIERMKAFSQNRRTINKNTQANRPADASRAQVVVSKPASSREKGLAFAKCVPKPRSSQKTDTELLTDKTD 280
BLAST of mRNA_E_fasciculatus_S2_contig7733.15899.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXT8_9STRA) HSP 1 Score: 105 bits (263), Expect = 6.070e-22 Identity = 62/129 (48.06%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 949 PVSAGTRPCAADSEDKTTALVKTPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAARGDSDRRXXXXXXXXXXRTRALAFARKIPLPR 1335
PV ++ C + E + +V T +D L FS+KAR V Y+PC L +Y++ KP GY ELGKLQPDL TDELV KRA ERIK FS NLR IN +A A+ D + R + LAFA+++P PR
Sbjct: 84 PVQNSSKECRSPREINESRVV-TGQDQLAFSRKARTVQYEPCKLSQYKKEKPDGYYELGKLQPDLNTDELVEKRAKNERIKAFSQNLRAINK-SAQAKKPVDTKIESEIKPKSTREKGLAFAKQVPKPR 210
BLAST of mRNA_E_fasciculatus_S2_contig7733.15899.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJR3_PYTOL) HSP 1 Score: 108 bits (270), Expect = 6.430e-22 Identity = 75/134 (55.97%), Postives = 90/134 (67.16%), Query Frame = 1
Query: 991 DKTTALVKTPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAARGDSDRRXXXXXXXXXX--RTRALAFARKIPLPRKVVKAQQQPAAD-PGDP 1383
++ A V+T D L FS+KAR V + PCTL +Y++ KP GY ELGKLQPDL + ELV KRAN ERIK FS NLR+IN TA + D XXXXXXXX R +ALAFA+ IP PR QQ+P A+ PG P
Sbjct: 236 ERNEARVQTDDDQLAFSRKARPVQFAPCTLSQYKKEKPAGYYELGKLQPDLNSSELVQKRANLERIKAFSKNLREINKVTAPSHNPEDXXXXXXXXXXQSSSRDKALAFAKHIPKPR----IQQRPLAESPGAP 365
BLAST of mRNA_E_fasciculatus_S2_contig7733.15899.1 vs.
Match: Uncharacterized (protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZA95_9STRA) HSP 1 Score: 105 bits (262), Expect = 7.060e-22 Identity = 86/221 (38.91%), Postives = 113/221 (51.13%), Query Frame = 1
Query: 763 KRVEFSEGLQ-GPTTQEPRAPRSSVRRHLVSPKALPPKRAD--------------ASP-KAQVSPAKRWRSQAERSPSPVSAGTRPCAADSEDKTTALVKTPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAARGDSDRRXXXXXXXXXXRTRALAFAR-KIPLPRKVVKAQQQPAADP 1374
KR + SE ++ GP ++P+ P + V + + S A+ +AD ASP K + SP K ++A P+PV D V T +D L FSKKAR V ++PCTL EY++ K TGY ELGKL+PDL D+LV KRAN ERIKEFS NLR IN + R +ALAFA+ K+P P+ V K P P
Sbjct: 21 KRSDGSEEVRSGPLRKKPQPPSALVPKAVASNNAVHEAKADGDSEEETXXXXXXQASPVKKKSSPKKTKSTKAPERPTPV------------DLNEQRVVTEQDQLAFSKKARPVQFEPCTLSEYKQEKHTGYYELGKLKPDLNADDLVEKRANKERIKEFSKNLRAINQTLKK----KEVVEVTPEKTLSTRDKALAFAKDKVPKPKVVAKKMPSPTPKP 225
BLAST of mRNA_E_fasciculatus_S2_contig7733.15899.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NGS2_PHYIT) HSP 1 Score: 102 bits (255), Expect = 3.480e-21 Identity = 56/110 (50.91%), Postives = 72/110 (65.45%), Query Frame = 1
Query: 1009 VKTPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAARG-DSDRRXXXXXXXXXXRTRALAFARKIPLPR 1335
V T +D L FS+KAR V Y+PC L +Y++ KP GY ELGKLQPDL TDELV KRA +RIK FS NLR IN +T + + D+ + R + LAFA+++P PR
Sbjct: 91 VVTEQDQLAFSRKARTVQYEPCKLAQYKKEKPDGYYELGKLQPDLNTDELVEKRAKNDRIKAFSQNLRTINKNTQSKKPVDATKEQLANAKPRSSREKGLAFAKRVPKPR 200
BLAST of mRNA_E_fasciculatus_S2_contig7733.15899.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RGZ4_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.620e-20 Identity = 55/110 (50.00%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 1009 VKTPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAAR-GDSDRRXXXXXXXXXXRTRALAFARKIPLPR 1335
V T +D L FS+KAR V ++PC L +Y++ KP GY ELGKLQPDL TDELV KRA ERIK FS NLR IN + + + +S R + LAFA+++P PR
Sbjct: 66 VVTDQDQLAFSRKARPVQFEPCKLSQYKKEKPDGYYELGKLQPDLNTDELVEKRAKNERIKAFSQNLRTINKNVQSKKPAESSNEQAAITKPKSTREKGLAFAKRVPKPR 175
BLAST of mRNA_E_fasciculatus_S2_contig7733.15899.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YE07_PHYSP) HSP 1 Score: 101 bits (252), Expect = 1.780e-20 Identity = 56/108 (51.85%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 1015 TPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAARG-DSDRRXXXXXXXXXXRTRALAFARKIPLPR 1335
T +D L FS+KAR V Y+PC L +Y++ KP GY ELGKLQPDL TDELV KRA ERIK FS NLR IN + A + +S R + LAFA+++P PR
Sbjct: 99 TDQDQLAFSRKARPVQYEPCKLSQYKKEKPDGYYELGKLQPDLNTDELVEKRAKNERIKAFSQNLRVINKNAQAKKPTESGNEQKATAKAKSTREKGLAFAKRVPKPR 206
BLAST of mRNA_E_fasciculatus_S2_contig7733.15899.1 vs.
Match: Uncharacterized (protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9EW13_PHYPR) HSP 1 Score: 103 bits (256), Expect = 2.000e-20 Identity = 55/109 (50.46%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 1009 VKTPKDMLLFSKKARQVDYKPCTLKEYREAKPTGYVELGKLQPDLYTDELVAKRANAERIKEFSTNLRKINSDTAAARGDSDRRXXXXXXXXXXRTRALAFARKIPLPR 1335
V T +D L FS++AR V Y+PC L +Y++ KP GY ELGKLQPDL TDELV KRA ERIK FS NLR IN + + D + R + LAFA+++P PR
Sbjct: 182 VVTEQDQLAFSRRARPVQYEPCKLSQYKKEKPDGYYELGKLQPDLNTDELVEKRAKNERIKAFSQNLRVINKNASKKPTDISKEQPANLKPKSSREKGLAFAKRVPKPR 290 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7733.15899.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7733.15899.1 >prot_E_fasciculatus_S2_contig7733.15899.1 ID=prot_E_fasciculatus_S2_contig7733.15899.1|Name=mRNA_E_fasciculatus_S2_contig7733.15899.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=511bp MDHEDNGQRLRRNIQRQEYDGSSGPPPGEDAGYSSNRYPERAGGDDVFFGback to top mRNA from alignment at E_fasciculatus_S2_contig7733:2911..5771- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7733.15899.1 ID=mRNA_E_fasciculatus_S2_contig7733.15899.1|Name=mRNA_E_fasciculatus_S2_contig7733.15899.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2861bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7733:2911..5771- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7733:2911..5771- >mRNA_E_fasciculatus_S2_contig7733.15899.1 ID=mRNA_E_fasciculatus_S2_contig7733.15899.1|Name=mRNA_E_fasciculatus_S2_contig7733.15899.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1533bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7733:2911..5771- (Ectocarpus fasciculatus EfasUO2)back to top |